Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 AL121917.1-203ENST00000605534 577 ntBASIC2.58□□□□□ -2
LDB1Q86U70 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC2.58□□□□□ -2
LDB1Q86U70 AC244517.12-201ENST00000623581 663 ntBASIC2.58□□□□□ -2
LDB1Q86U70 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.58□□□□□ -2
LDB1Q86U70 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
LDB1Q86U70 MTND4P27-201ENST00000450813 1354 ntBASIC2.58□□□□□ -2
LDB1Q86U70 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
LDB1Q86U70 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.58□□□□□ -2
LDB1Q86U70 Z75746.1-201ENST00000440243 2080 ntBASIC2.57□□□□□ -2
LDB1Q86U70 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LDB1Q86U70 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
LDB1Q86U70 SNORD62.1-201ENST00000362541 86 ntBASIC2.57□□□□□ -2
LDB1Q86U70 RNU6-527P-201ENST00000363425 104 ntBASIC2.57□□□□□ -2
LDB1Q86U70 Y_RNA.295-201ENST00000364918 102 ntBASIC2.57□□□□□ -2
LDB1Q86U70 MIR9-1-201ENST00000385198 89 ntBASIC2.57□□□□□ -2
LDB1Q86U70 SRIP2-201ENST00000428470 166 ntBASIC2.57□□□□□ -2
LDB1Q86U70 AC108938.1-201ENST00000451204 136 ntBASIC2.57□□□□□ -2
LDB1Q86U70 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC2.57□□□□□ -2
LDB1Q86U70 RNU7-138P-201ENST00000459479 64 ntBASIC2.57□□□□□ -2
LDB1Q86U70 AC133134.1-201ENST00000466800 359 ntBASIC2.57□□□□□ -2
LDB1Q86U70 AC018437.1-201ENST00000492214 406 ntBASIC2.57□□□□□ -2
LDB1Q86U70 RPL23AP49-201ENST00000492925 468 ntBASIC2.57□□□□□ -2
LDB1Q86U70 NAF1-205ENST00000509434 385 ntTSL 3 BASIC2.57□□□□□ -2
LDB1Q86U70 RNU6-1069P-201ENST00000516612 133 ntBASIC2.57□□□□□ -2
LDB1Q86U70 RN7SKP40-201ENST00000517211 242 ntBASIC2.57□□□□□ -2
LDB1Q86U70 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.57□□□□□ -2
LDB1Q86U70 AP003033.1-201ENST00000527244 415 ntBASIC2.57□□□□□ -2
LDB1Q86U70 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.57□□□□□ -2
LDB1Q86U70 AL356280.1-201ENST00000603614 379 ntBASIC2.57□□□□□ -2
LDB1Q86U70 RNU6-85P-201ENST00000605989 107 ntBASIC2.57□□□□□ -2
LDB1Q86U70 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.57□□□□□ -2
LDB1Q86U70 AC024614.3-201ENST00000637860 256 ntBASIC2.57□□□□□ -2
LDB1Q86U70 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.57□□□□□ -2
LDB1Q86U70 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.57□□□□□ -2
LDB1Q86U70 AC121333.1-201ENST00000567488 2709 ntBASIC2.56□□□□□ -2
LDB1Q86U70 SNORD56.1-201ENST00000362913 68 ntBASIC2.56□□□□□ -2
LDB1Q86U70 SNORD114-19-201ENST00000363072 75 ntBASIC2.56□□□□□ -2
LDB1Q86U70 RNU6-522P-201ENST00000364497 107 ntBASIC2.56□□□□□ -2
LDB1Q86U70 Y_RNA.256-201ENST00000364594 104 ntBASIC2.56□□□□□ -2
LDB1Q86U70 RNU6-534P-201ENST00000364877 106 ntBASIC2.56□□□□□ -2
LDB1Q86U70 RNU6-622P-201ENST00000384272 103 ntBASIC2.56□□□□□ -2
LDB1Q86U70 MIR218-1-201ENST00000384999 110 ntBASIC2.56□□□□□ -2
LDB1Q86U70 EIF4E2P1-201ENST00000393781 255 ntBASIC2.56□□□□□ -2
LDB1Q86U70 AL139095.1-201ENST00000404326 391 ntBASIC2.56□□□□□ -2
LDB1Q86U70 U6atac.2-201ENST00000408644 118 ntBASIC2.56□□□□□ -2
LDB1Q86U70 RNA5SP390-201ENST00000410191 113 ntBASIC2.56□□□□□ -2
LDB1Q86U70 RNU4-26P-201ENST00000410270 107 ntBASIC2.56□□□□□ -2
LDB1Q86U70 RNU6-373P-201ENST00000411247 98 ntBASIC2.56□□□□□ -2
LDB1Q86U70 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.56□□□□□ -2
LDB1Q86U70 ARL5AP4-201ENST00000430731 512 ntBASIC2.56□□□□□ -2
LDB1Q86U70 AL591043.1-201ENST00000432461 424 ntBASIC2.56□□□□□ -2
LDB1Q86U70 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC2.56□□□□□ -2
LDB1Q86U70 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.56□□□□□ -2
LDB1Q86U70 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC2.56□□□□□ -2
LDB1Q86U70 AL445687.1-201ENST00000439946 251 ntBASIC2.56□□□□□ -2
LDB1Q86U70 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.56□□□□□ -2
LDB1Q86U70 AC117503.1-201ENST00000472241 394 ntBASIC2.56□□□□□ -2
LDB1Q86U70 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.56□□□□□ -2
LDB1Q86U70 AP001025.1-201ENST00000486139 332 ntBASIC2.56□□□□□ -2
LDB1Q86U70 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.56□□□□□ -2
LDB1Q86U70 AC023141.11-201ENST00000508864 202 ntBASIC2.56□□□□□ -2
LDB1Q86U70 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.56□□□□□ -2
LDB1Q86U70 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.56□□□□□ -2
LDB1Q86U70 RNA5SP282-201ENST00000516355 108 ntBASIC2.56□□□□□ -2
LDB1Q86U70 COPS8P3-201ENST00000526024 482 ntBASIC2.56□□□□□ -2
LDB1Q86U70 AC010186.2-204ENST00000537668 439 ntBASIC2.56□□□□□ -2
LDB1Q86U70 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC2.56□□□□□ -2
LDB1Q86U70 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC2.56□□□□□ -2
LDB1Q86U70 MIR4319-201ENST00000577285 85 ntBASIC2.56□□□□□ -2
LDB1Q86U70 AC092794.1-201ENST00000612734 582 ntBASIC2.56□□□□□ -2
LDB1Q86U70 SCARNA15.3-201ENST00000626315 122 ntBASIC2.56□□□□□ -2
LDB1Q86U70 SCARNA4.1-201ENST00000628597 123 ntBASIC2.56□□□□□ -2
LDB1Q86U70 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.56□□□□□ -2
LDB1Q86U70 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.56□□□□□ -2
LDB1Q86U70 RNU6-859P-201ENST00000362728 107 ntBASIC2.55□□□□□ -2
LDB1Q86U70 Y_RNA.167-201ENST00000363735 109 ntBASIC2.55□□□□□ -2
LDB1Q86U70 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LDB1Q86U70 MIR1277-201ENST00000408536 78 ntBASIC2.55□□□□□ -2
LDB1Q86U70 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.55□□□□□ -2
LDB1Q86U70 RNU2-25P-201ENST00000411041 191 ntBASIC2.55□□□□□ -2
LDB1Q86U70 AC138623.1-201ENST00000418060 216 ntBASIC2.55□□□□□ -2
LDB1Q86U70 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.55□□□□□ -2
LDB1Q86U70 NUP35P1-201ENST00000422734 947 ntBASIC2.55□□□□□ -2
LDB1Q86U70 RPS3AP44-201ENST00000425466 790 ntBASIC2.55□□□□□ -2
LDB1Q86U70 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.55□□□□□ -2
LDB1Q86U70 AC008571.1-201ENST00000467232 300 ntBASIC2.55□□□□□ -2
LDB1Q86U70 AC092989.1-201ENST00000481235 277 ntBASIC2.55□□□□□ -2
LDB1Q86U70 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.55□□□□□ -2
LDB1Q86U70 RNA5SP356-201ENST00000515972 94 ntBASIC2.55□□□□□ -2
LDB1Q86U70 SNORA19.2-201ENST00000516013 114 ntBASIC2.55□□□□□ -2
LDB1Q86U70 AC109329.1-201ENST00000518744 317 ntBASIC2.55□□□□□ -2
LDB1Q86U70 AC087854.1-201ENST00000519706 414 ntBASIC2.55□□□□□ -2
LDB1Q86U70 AC243972.3-201ENST00000539655 198 ntBASIC2.55□□□□□ -2
LDB1Q86U70 AC090897.2-201ENST00000581715 130 ntBASIC2.55□□□□□ -2
LDB1Q86U70 AC069294.1-201ENST00000608397 350 ntBASIC2.55□□□□□ -2
LDB1Q86U70 RMST_3.1-201ENST00000611651 109 ntBASIC2.55□□□□□ -2
LDB1Q86U70 U6atac.1-201ENST00000616025 117 ntBASIC2.55□□□□□ -2
LDB1Q86U70 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LDB1Q86U70 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC2.55□□□□□ -2
LDB1Q86U70 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 122.7 ms