| NDUFA9 | Q16795 | AL160287.1-202 | ENST00000638113 | 454 nt | TSL 5 BASIC | 1.98 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | CSNK1G3-202 | ENST00000360683 | 4047 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.98 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | CFHR4-204 | ENST00000608469 | 1601 nt | TSL 1 (best) BASIC | 1.98 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | HAUS6P2-201 | ENST00000433254 | 2404 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | RNU6-1010P-201 | ENST00000362757 | 107 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | RNU6-487P-201 | ENST00000365430 | 104 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | RNU4-52P-201 | ENST00000384209 | 138 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | RNU6-622P-201 | ENST00000384272 | 103 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | RNU1-57P-201 | ENST00000384491 | 166 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | RAP1BP3-201 | ENST00000407180 | 549 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | RNU6ATAC38P-201 | ENST00000408119 | 126 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | SNORD23.1-201 | ENST00000408212 | 104 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | U3.40-201 | ENST00000408706 | 208 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | RNU2-9P-201 | ENST00000410194 | 145 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | CYCSP33-201 | ENST00000414485 | 327 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | AL592435.1-201 | ENST00000416401 | 469 nt | TSL 3 BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | AC074117.2-201 | ENST00000417130 | 397 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | AC000123.1-201 | ENST00000418215 | 516 nt | TSL 5 BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | AL356277.2-201 | ENST00000421318 | 441 nt | TSL 2 BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | AC008267.5-201 | ENST00000424928 | 265 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | AL365400.1-201 | ENST00000431854 | 640 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | AL513124.1-201 | ENST00000450410 | 614 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | AL021397.1-201 | ENST00000451806 | 248 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | AC006026.2-201 | ENST00000457376 | 180 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | AC117503.1-201 | ENST00000472241 | 394 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | AP001025.1-201 | ENST00000486139 | 332 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | RPS27P21-201 | ENST00000486977 | 252 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | AC092436.1-201 | ENST00000506450 | 503 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | RNU1-41P-201 | ENST00000516161 | 162 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | RNU1-48P-201 | ENST00000516400 | 162 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | Y_RNA.688-201 | ENST00000516565 | 95 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | FAM92A-209 | ENST00000519679 | 538 nt | TSL 4 BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | IGKV3-31-201 | ENST00000523109 | 329 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | LINC02546-202 | ENST00000528119 | 801 nt | TSL 5 BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | AP000873.5-201 | ENST00000533906 | 236 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | AL355076.2-202 | ENST00000553754 | 574 nt | TSL 4 BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | AC027807.1-201 | ENST00000559921 | 996 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | MIR5002-201 | ENST00000584713 | 97 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | AC110760.3-201 | ENST00000598794 | 467 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | RPL30P11-203 | ENST00000598995 | 310 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | AC073410.2-201 | ENST00000603240 | 332 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | AC025449.1-201 | ENST00000603896 | 529 nt | BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | AC034238.1-213 | ENST00000611148 | 150 nt | TSL 5 BASIC | 1.97 | □□□□□ -2.09 | | |
| NDUFA9 | Q16795 | OR5AK2-201 | ENST00000326855 | 996 nt | APPRIS P1 BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | Y_RNA.77-201 | ENST00000362962 | 107 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | RNA5SP240-201 | ENST00000365355 | 128 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | DEFB130A-201 | ENST00000400079 | 240 nt | APPRIS P1 TSL 1 (best) BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | RN7SKP158-201 | ENST00000410453 | 326 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | ATP13A5-AS1-201 | ENST00000414634 | 476 nt | TSL 3 BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | AL669831.1-202 | ENST00000428504 | 417 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | AC092839.1-201 | ENST00000433475 | 536 nt | TSL 4 BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | TTTY16-201 | ENST00000437686 | 192 nt | TSL 1 (best) BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | DEFB130B-201 | ENST00000437818 | 240 nt | APPRIS P1 TSL 1 (best) BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | GTF2IP13-201 | ENST00000438487 | 386 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | AL161788.1-201 | ENST00000441805 | 169 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | AC124916.1-201 | ENST00000444020 | 547 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | AC073342.1-202 | ENST00000446192 | 457 nt | TSL 5 BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | MTND1P18-201 | ENST00000448191 | 573 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | CYP2C59P-201 | ENST00000457790 | 269 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | MTCO3P9-201 | ENST00000506989 | 781 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | AC117532.1-201 | ENST00000514638 | 323 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | MIR514B-201 | ENST00000516774 | 80 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | AL356057.1-201 | ENST00000533798 | 831 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | AC084879.2-201 | ENST00000551656 | 369 nt | TSL 3 BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | MIR4703-201 | ENST00000577728 | 79 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | AC022960.1-201 | ENST00000582269 | 348 nt | TSL 3 BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | AC009314.1-201 | ENST00000603871 | 304 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | NDUFA8P1-201 | ENST00000605525 | 367 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | U4atac.1-201 | ENST00000618345 | 95 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | SMIM2-AS1-204 | ENST00000619472 | 746 nt | TSL 3 BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | AC136475.10-201 | ENST00000620253 | 385 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | AL031601.2-202 | ENST00000622650 | 282 nt | BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | ATP13A3-201 | ENST00000256031 | 7322 nt | APPRIS P1 TSL 5 BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | MAP4K3-205 | ENST00000437545 | 3924 nt | TSL 5 BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | SYT14-201 | ENST00000367015 | 5094 nt | APPRIS ALT2 TSL 1 (best) BASIC | 1.96 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | NEDD1-204 | ENST00000457368 | 3162 nt | TSL 2 BASIC | 1.95 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | SNORD56.1-201 | ENST00000362913 | 68 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | RNU6-529P-201 | ENST00000363383 | 104 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | RNU6-1032P-201 | ENST00000384100 | 107 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | SNORA67.3-201 | ENST00000384366 | 140 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | RNU1-148P-201 | ENST00000384472 | 162 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | Y_RNA.553-201 | ENST00000384670 | 102 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | RNU6-606P-201 | ENST00000384721 | 111 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | MIR186-201 | ENST00000384988 | 86 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | RNU4-46P-201 | ENST00000410818 | 138 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | AL356379.1-201 | ENST00000414105 | 126 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | AC009158.1-206 | ENST00000417476 | 454 nt | TSL 3 BASIC | 1.95 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | AIMP1P2-201 | ENST00000425294 | 312 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | GPM6BP3-201 | ENST00000442797 | 145 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | MTCO1P19-201 | ENST00000443487 | 500 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | AC069542.1-201 | ENST00000445235 | 557 nt | TSL 3 BASIC | 1.95 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | RPL23AP7-203 | ENST00000449021 | 469 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | OFD1P4Y-201 | ENST00000455273 | 1179 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | AC016751.1-201 | ENST00000458254 | 306 nt | TSL 3 BASIC | 1.95 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | AC010424.1-201 | ENST00000506336 | 297 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | GTF2H2C-212 | ENST00000512736 | 832 nt | TSL 1 (best) BASIC | 1.95 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | RNU2-53P-201 | ENST00000516257 | 147 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | AC023866.1-201 | ENST00000518064 | 579 nt | TSL 4 BASIC | 1.95 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | AC109329.1-201 | ENST00000518744 | 317 nt | BASIC | 1.95 | □□□□□ -2.1 | | |
| NDUFA9 | Q16795 | AC087463.2-201 | ENST00000565943 | 472 nt | TSL 3 BASIC | 1.95 | □□□□□ -2.1 | | |