Protein–RNA interactions for Protein: Q00444

HOXC5, Homeobox protein Hox-C5, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC5Q00444 AL353770.2-201ENST00000620024 78 ntBASIC1.06□□□□□ -2.24
HOXC5Q00444 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.06□□□□□ -2.24
HOXC5Q00444 AC099786.3-201ENST00000565735 1410 ntBASIC1.06□□□□□ -2.24
HOXC5Q00444 AP000560.1-201ENST00000624150 1937 ntBASIC1.05□□□□□ -2.24
HOXC5Q00444 Y_RNA.46-201ENST00000362695 102 ntBASIC1.05□□□□□ -2.24
HOXC5Q00444 SNORD14B-201ENST00000364533 90 ntBASIC1.05□□□□□ -2.24
HOXC5Q00444 RNU4-91P-201ENST00000364778 135 ntBASIC1.05□□□□□ -2.24
HOXC5Q00444 OR6C66P-201ENST00000414917 930 ntBASIC1.05□□□□□ -2.24
HOXC5Q00444 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.05□□□□□ -2.24
HOXC5Q00444 RPS15AP10-201ENST00000432472 382 ntBASIC1.05□□□□□ -2.24
HOXC5Q00444 AL035666.1-201ENST00000446195 348 ntBASIC1.05□□□□□ -2.24
HOXC5Q00444 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC1.05□□□□□ -2.24
HOXC5Q00444 AC132942.1-201ENST00000486753 483 ntBASIC1.05□□□□□ -2.24
HOXC5Q00444 AC112206.3-201ENST00000514578 389 ntBASIC1.05□□□□□ -2.24
HOXC5Q00444 Y_RNA.687-201ENST00000516558 91 ntBASIC1.05□□□□□ -2.24
HOXC5Q00444 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.05□□□□□ -2.24
HOXC5Q00444 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC1.05□□□□□ -2.24
HOXC5Q00444 AC123904.2-201ENST00000548059 300 ntBASIC1.05□□□□□ -2.24
HOXC5Q00444 CR383656.8-201ENST00000549046 145 ntBASIC1.05□□□□□ -2.24
HOXC5Q00444 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.05□□□□□ -2.24
HOXC5Q00444 AC080013.3-201ENST00000606839 578 ntBASIC1.05□□□□□ -2.24
HOXC5Q00444 AC130454.1-201ENST00000622948 401 ntBASIC1.05□□□□□ -2.24
HOXC5Q00444 FRG1KP-201ENST00000623592 341 ntBASIC1.05□□□□□ -2.24
HOXC5Q00444 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
HOXC5Q00444 MIR412-201ENST00000362142 91 ntBASIC1.04□□□□□ -2.24
HOXC5Q00444 RNA5SP493-201ENST00000364115 91 ntBASIC1.04□□□□□ -2.24
HOXC5Q00444 RNY4P16-201ENST00000364768 94 ntBASIC1.04□□□□□ -2.24
HOXC5Q00444 RNU4-22P-201ENST00000411058 166 ntBASIC1.04□□□□□ -2.24
HOXC5Q00444 AL591704.2-201ENST00000421658 181 ntBASIC1.04□□□□□ -2.24
HOXC5Q00444 AL627311.1-201ENST00000431514 115 ntBASIC1.04□□□□□ -2.24
HOXC5Q00444 RPL23AP30-201ENST00000432419 501 ntBASIC1.04□□□□□ -2.24
HOXC5Q00444 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC1.04□□□□□ -2.24
HOXC5Q00444 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.04□□□□□ -2.24
HOXC5Q00444 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.04□□□□□ -2.24
HOXC5Q00444 CR769776.1-201ENST00000441254 787 ntBASIC1.04□□□□□ -2.24
HOXC5Q00444 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
HOXC5Q00444 snoU13.9-201ENST00000458927 103 ntBASIC1.04□□□□□ -2.24
HOXC5Q00444 snoU13.14-201ENST00000459372 104 ntBASIC1.04□□□□□ -2.24
HOXC5Q00444 AC130509.1-201ENST00000464158 433 ntBASIC1.04□□□□□ -2.24
HOXC5Q00444 AC009646.1-201ENST00000510455 318 ntBASIC1.04□□□□□ -2.24
HOXC5Q00444 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC1.04□□□□□ -2.24
HOXC5Q00444 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.04□□□□□ -2.24
HOXC5Q00444 AC068587.4-201ENST00000533893 186 ntBASIC1.04□□□□□ -2.24
HOXC5Q00444 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.04□□□□□ -2.24
HOXC5Q00444 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.04□□□□□ -2.24
HOXC5Q00444 MIR3169-201ENST00000578032 83 ntBASIC1.04□□□□□ -2.24
HOXC5Q00444 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC1.04□□□□□ -2.24
HOXC5Q00444 MIR6715A-201ENST00000615929 79 ntBASIC1.04□□□□□ -2.24
HOXC5Q00444 AC120349.3-201ENST00000624377 529 ntBASIC1.04□□□□□ -2.24
HOXC5Q00444 AL138960.2-201ENST00000625145 535 ntBASIC1.04□□□□□ -2.24
HOXC5Q00444 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
HOXC5Q00444 MTND4P16-201ENST00000466108 1367 ntBASIC1.04□□□□□ -2.24
HOXC5Q00444 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
HOXC5Q00444 MIR378A-201ENST00000362177 66 ntBASIC1.03□□□□□ -2.24
HOXC5Q00444 SNORD56.1-201ENST00000362913 68 ntBASIC1.03□□□□□ -2.24
HOXC5Q00444 RNU6-271P-201ENST00000363858 105 ntBASIC1.03□□□□□ -2.24
HOXC5Q00444 SNORA62.1-201ENST00000364287 154 ntBASIC1.03□□□□□ -2.24
HOXC5Q00444 SNORD114-6-201ENST00000364393 72 ntBASIC1.03□□□□□ -2.24
HOXC5Q00444 RNU6-160P-201ENST00000384591 107 ntBASIC1.03□□□□□ -2.24
HOXC5Q00444 RNU2-62P-201ENST00000410868 191 ntBASIC1.03□□□□□ -2.24
HOXC5Q00444 MTATP6P20-201ENST00000414147 562 ntBASIC1.03□□□□□ -2.24
HOXC5Q00444 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
HOXC5Q00444 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.03□□□□□ -2.24
HOXC5Q00444 RPS6P15-201ENST00000431996 751 ntBASIC1.03□□□□□ -2.24
HOXC5Q00444 AL008629.1-201ENST00000438615 184 ntBASIC1.03□□□□□ -2.24
HOXC5Q00444 MTND3P1-201ENST00000441336 220 ntBASIC1.03□□□□□ -2.24
HOXC5Q00444 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.03□□□□□ -2.24
HOXC5Q00444 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.03□□□□□ -2.24
HOXC5Q00444 RPL30P1-201ENST00000488676 339 ntBASIC1.03□□□□□ -2.24
HOXC5Q00444 AC025465.3-201ENST00000510570 311 ntBASIC1.03□□□□□ -2.24
HOXC5Q00444 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
HOXC5Q00444 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.03□□□□□ -2.24
HOXC5Q00444 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.03□□□□□ -2.24
HOXC5Q00444 AL022154.1-201ENST00000604698 785 ntBASIC1.03□□□□□ -2.24
HOXC5Q00444 AL158042.1-201ENST00000605338 460 ntBASIC1.03□□□□□ -2.24
HOXC5Q00444 AL158032.1-201ENST00000605401 106 ntBASIC1.03□□□□□ -2.24
HOXC5Q00444 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
HOXC5Q00444 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
HOXC5Q00444 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.03□□□□□ -2.24
HOXC5Q00444 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.25
HOXC5Q00444 RNU6-1000P-201ENST00000391066 106 ntBASIC1.02□□□□□ -2.25
HOXC5Q00444 RPS3AP36-201ENST00000398190 775 ntBASIC1.02□□□□□ -2.25
HOXC5Q00444 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC1.02□□□□□ -2.25
HOXC5Q00444 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.02□□□□□ -2.25
HOXC5Q00444 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.02□□□□□ -2.25
HOXC5Q00444 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.02□□□□□ -2.25
HOXC5Q00444 AL135790.2-201ENST00000437701 267 ntBASIC1.02□□□□□ -2.25
HOXC5Q00444 MTND2P4-201ENST00000445034 1004 ntBASIC1.02□□□□□ -2.25
HOXC5Q00444 AL358794.1-201ENST00000445689 381 ntBASIC1.02□□□□□ -2.25
HOXC5Q00444 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.02□□□□□ -2.25
HOXC5Q00444 MIR449C-201ENST00000516047 92 ntBASIC1.02□□□□□ -2.25
HOXC5Q00444 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.02□□□□□ -2.25
HOXC5Q00444 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
HOXC5Q00444 MIR4524B-201ENST00000581569 115 ntBASIC1.02□□□□□ -2.25
HOXC5Q00444 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.02□□□□□ -2.25
HOXC5Q00444 MIR8063-201ENST00000621930 81 ntBASIC1.02□□□□□ -2.25
HOXC5Q00444 AP002782.1-201ENST00000623107 614 ntBASIC1.02□□□□□ -2.25
HOXC5Q00444 UGP2-231ENST00000627474 264 ntTSL 5 BASIC1.02□□□□□ -2.25
HOXC5Q00444 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
HOXC5Q00444 AC013437.2-201ENST00000639587 677 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms