Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 HMGN2P9-201ENST00000476875 229 ntBASIC0.51□□□□□ -2.33
LSM3P62310 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.51□□□□□ -2.33
LSM3P62310 AC008837.2-201ENST00000513076 418 ntBASIC0.51□□□□□ -2.33
LSM3P62310 RNU5A-4P-201ENST00000516588 111 ntBASIC0.51□□□□□ -2.33
LSM3P62310 RNU6-64P-201ENST00000517119 105 ntBASIC0.51□□□□□ -2.33
LSM3P62310 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.51□□□□□ -2.33
LSM3P62310 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.51□□□□□ -2.33
LSM3P62310 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC0.51□□□□□ -2.33
LSM3P62310 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.51□□□□□ -2.33
LSM3P62310 MIR3664-201ENST00000579074 99 ntBASIC0.51□□□□□ -2.33
LSM3P62310 VN1R80P-201ENST00000597126 338 ntBASIC0.51□□□□□ -2.33
LSM3P62310 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.51□□□□□ -2.33
LSM3P62310 AL358072.1-201ENST00000604156 575 ntBASIC0.51□□□□□ -2.33
LSM3P62310 BNIP3P31-201ENST00000604515 566 ntBASIC0.51□□□□□ -2.33
LSM3P62310 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC0.51□□□□□ -2.33
LSM3P62310 AL365204.3-201ENST00000612448 685 ntBASIC0.51□□□□□ -2.33
LSM3P62310 MIR3529-201ENST00000637713 78 ntBASIC0.51□□□□□ -2.33
LSM3P62310 AC023934.1-201ENST00000574529 2389 ntBASIC0.5□□□□□ -2.33
LSM3P62310 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.5□□□□□ -2.33
LSM3P62310 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
LSM3P62310 MIR520A-201ENST00000384862 85 ntBASIC0.5□□□□□ -2.33
LSM3P62310 MIR19A-201ENST00000384878 82 ntBASIC0.5□□□□□ -2.33
LSM3P62310 MIR194-1-201ENST00000384892 85 ntBASIC0.5□□□□□ -2.33
LSM3P62310 RNU2-23P-201ENST00000410545 195 ntBASIC0.5□□□□□ -2.33
LSM3P62310 RNU6-1025P-201ENST00000410629 104 ntBASIC0.5□□□□□ -2.33
LSM3P62310 RNU2-64P-201ENST00000411315 191 ntBASIC0.5□□□□□ -2.33
LSM3P62310 AC108667.1-201ENST00000428618 249 ntBASIC0.5□□□□□ -2.33
LSM3P62310 FO393414.1-201ENST00000428697 1184 ntBASIC0.5□□□□□ -2.33
LSM3P62310 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC0.5□□□□□ -2.33
LSM3P62310 AC099677.2-201ENST00000436385 175 ntBASIC0.5□□□□□ -2.33
LSM3P62310 MTND4P6-201ENST00000438297 472 ntBASIC0.5□□□□□ -2.33
LSM3P62310 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC0.5□□□□□ -2.33
LSM3P62310 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.5□□□□□ -2.33
LSM3P62310 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.5□□□□□ -2.33
LSM3P62310 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.5□□□□□ -2.33
LSM3P62310 RPL31P3-201ENST00000458430 332 ntBASIC0.5□□□□□ -2.33
LSM3P62310 snoU109.2-201ENST00000459316 135 ntBASIC0.5□□□□□ -2.33
LSM3P62310 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.5□□□□□ -2.33
LSM3P62310 RNU6-165P-201ENST00000517170 99 ntBASIC0.5□□□□□ -2.33
LSM3P62310 AC022022.2-201ENST00000602989 360 ntBASIC0.5□□□□□ -2.33
LSM3P62310 BNIP3P9-201ENST00000603714 553 ntBASIC0.5□□□□□ -2.33
LSM3P62310 AL590095.2-201ENST00000604136 117 ntBASIC0.5□□□□□ -2.33
LSM3P62310 AC007363.1-201ENST00000604736 620 ntBASIC0.5□□□□□ -2.33
LSM3P62310 AC026741.1-201ENST00000605892 482 ntBASIC0.5□□□□□ -2.33
LSM3P62310 AC130324.3-201ENST00000614165 542 ntBASIC0.5□□□□□ -2.33
LSM3P62310 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.5□□□□□ -2.33
LSM3P62310 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.5□□□□□ -2.33
LSM3P62310 AC018630.2-201ENST00000534866 2403 ntBASIC0.5□□□□□ -2.33
LSM3P62310 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
LSM3P62310 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
LSM3P62310 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.49□□□□□ -2.33
LSM3P62310 MIR608-201ENST00000384820 100 ntBASIC0.49□□□□□ -2.33
LSM3P62310 RNU2-7P-201ENST00000410794 178 ntBASIC0.49□□□□□ -2.33
LSM3P62310 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.49□□□□□ -2.33
LSM3P62310 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC0.49□□□□□ -2.33
LSM3P62310 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.49□□□□□ -2.33
LSM3P62310 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC0.49□□□□□ -2.33
LSM3P62310 TXNL1P1-201ENST00000429528 554 ntBASIC0.49□□□□□ -2.33
LSM3P62310 MTCO2P25-201ENST00000447065 681 ntBASIC0.49□□□□□ -2.33
LSM3P62310 AC012308.1-201ENST00000451232 178 ntBASIC0.49□□□□□ -2.33
LSM3P62310 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC0.49□□□□□ -2.33
LSM3P62310 snoU13.14-201ENST00000459372 104 ntBASIC0.49□□□□□ -2.33
LSM3P62310 RAP1BP2-201ENST00000478270 544 ntBASIC0.49□□□□□ -2.33
LSM3P62310 RPL39P36-201ENST00000490784 156 ntBASIC0.49□□□□□ -2.33
LSM3P62310 HMGB1P30-201ENST00000492455 606 ntBASIC0.49□□□□□ -2.33
LSM3P62310 RNA5SP490-201ENST00000517141 136 ntBASIC0.49□□□□□ -2.33
LSM3P62310 AC136628.3-201ENST00000521868 290 ntBASIC0.49□□□□□ -2.33
LSM3P62310 AP000907.2-201ENST00000530827 353 ntBASIC0.49□□□□□ -2.33
LSM3P62310 AC004812.1-201ENST00000540773 146 ntBASIC0.49□□□□□ -2.33
LSM3P62310 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC0.49□□□□□ -2.33
LSM3P62310 MTCO2P2-201ENST00000591258 225 ntBASIC0.49□□□□□ -2.33
LSM3P62310 AC108706.1-201ENST00000611053 297 ntBASIC0.49□□□□□ -2.33
LSM3P62310 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC0.49□□□□□ -2.33
LSM3P62310 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.49□□□□□ -2.33
LSM3P62310 RNU5B-1-201ENST00000363286 116 ntBASIC0.48□□□□□ -2.33
LSM3P62310 RNU6-777P-201ENST00000364265 104 ntBASIC0.48□□□□□ -2.33
LSM3P62310 SNORA4.3-201ENST00000365564 137 ntBASIC0.48□□□□□ -2.33
LSM3P62310 MIR508-201ENST00000384857 115 ntBASIC0.48□□□□□ -2.33
LSM3P62310 RAP1BP3-201ENST00000407180 549 ntBASIC0.48□□□□□ -2.33
LSM3P62310 AC004941.2-201ENST00000427009 228 ntBASIC0.48□□□□□ -2.33
LSM3P62310 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.48□□□□□ -2.33
LSM3P62310 CETN4P-201ENST00000432407 469 ntBASIC0.48□□□□□ -2.33
LSM3P62310 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.48□□□□□ -2.33
LSM3P62310 PDCD5P2-201ENST00000507570 312 ntBASIC0.48□□□□□ -2.33
LSM3P62310 RNU6-143P-201ENST00000516942 93 ntBASIC0.48□□□□□ -2.33
LSM3P62310 AC091163.3-201ENST00000518269 1144 ntBASIC0.48□□□□□ -2.33
LSM3P62310 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.48□□□□□ -2.33
LSM3P62310 AC092325.1-201ENST00000566449 554 ntBASIC0.48□□□□□ -2.33
LSM3P62310 RPL21P136-201ENST00000605378 396 ntBASIC0.48□□□□□ -2.33
LSM3P62310 AL391813.2-201ENST00000609113 322 ntBASIC0.48□□□□□ -2.33
LSM3P62310 MIR8084-201ENST00000614105 89 ntBASIC0.48□□□□□ -2.33
LSM3P62310 AC231657.1-201ENST00000624313 397 ntBASIC0.48□□□□□ -2.33
LSM3P62310 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
LSM3P62310 RNU6-853P-201ENST00000364306 107 ntBASIC0.47□□□□□ -2.33
LSM3P62310 Y_RNA.255-201ENST00000364581 97 ntBASIC0.47□□□□□ -2.33
LSM3P62310 Y_RNA.332-201ENST00000365271 113 ntBASIC0.47□□□□□ -2.33
LSM3P62310 NEFMP1-201ENST00000443423 1006 ntBASIC0.47□□□□□ -2.33
LSM3P62310 AL583843.1-201ENST00000456070 346 ntBASIC0.47□□□□□ -2.33
LSM3P62310 SNRPFP4-201ENST00000456366 242 ntBASIC0.47□□□□□ -2.33
LSM3P62310 RNU1-131P-201ENST00000458943 161 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms