Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.67□□□□□ -2.3
VBP1P61758 AC007363.1-201ENST00000604736 620 ntBASIC0.67□□□□□ -2.3
VBP1P61758 AC090578.1-201ENST00000604955 591 ntBASIC0.67□□□□□ -2.3
VBP1P61758 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC0.67□□□□□ -2.3
VBP1P61758 AC078880.5-201ENST00000617845 421 ntBASIC0.67□□□□□ -2.3
VBP1P61758 AL512643.1-201ENST00000635735 524 ntBASIC0.67□□□□□ -2.3
VBP1P61758 MTND5P33-201ENST00000571250 1450 ntBASIC0.67□□□□□ -2.3
VBP1P61758 RNU6-212P-201ENST00000362642 104 ntBASIC0.66□□□□□ -2.3
VBP1P61758 RNU6-942P-201ENST00000363002 107 ntBASIC0.66□□□□□ -2.3
VBP1P61758 MIR532-201ENST00000385025 91 ntBASIC0.66□□□□□ -2.3
VBP1P61758 RNU6-733P-201ENST00000410759 104 ntBASIC0.66□□□□□ -2.3
VBP1P61758 ZNF736P7Y-201ENST00000425158 820 ntBASIC0.66□□□□□ -2.3
VBP1P61758 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC0.66□□□□□ -2.3
VBP1P61758 NEFMP1-201ENST00000443423 1006 ntBASIC0.66□□□□□ -2.3
VBP1P61758 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC0.66□□□□□ -2.3
VBP1P61758 EEF1E1P1-201ENST00000446998 430 ntBASIC0.66□□□□□ -2.3
VBP1P61758 snoU13.15-201ENST00000459407 104 ntBASIC0.66□□□□□ -2.3
VBP1P61758 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC0.66□□□□□ -2.3
VBP1P61758 HMGB1P30-201ENST00000492455 606 ntBASIC0.66□□□□□ -2.3
VBP1P61758 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC0.66□□□□□ -2.3
VBP1P61758 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.66□□□□□ -2.3
VBP1P61758 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.66□□□□□ -2.3
VBP1P61758 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.66□□□□□ -2.3
VBP1P61758 SNORD60.2-201ENST00000516883 86 ntBASIC0.66□□□□□ -2.3
VBP1P61758 RNA5SP437-201ENST00000517249 129 ntBASIC0.66□□□□□ -2.3
VBP1P61758 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC0.66□□□□□ -2.3
VBP1P61758 MIR3912-201ENST00000577566 105 ntBASIC0.66□□□□□ -2.3
VBP1P61758 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.66□□□□□ -2.3
VBP1P61758 MIR3664-201ENST00000579074 99 ntBASIC0.66□□□□□ -2.3
VBP1P61758 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC0.66□□□□□ -2.3
VBP1P61758 AC008751.2-201ENST00000597885 980 ntBASIC0.66□□□□□ -2.3
VBP1P61758 AC069114.2-201ENST00000604699 304 ntBASIC0.66□□□□□ -2.3
VBP1P61758 AC069545.1-201ENST00000605671 358 ntBASIC0.66□□□□□ -2.3
VBP1P61758 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.66□□□□□ -2.3
VBP1P61758 AC104985.3-201ENST00000623479 597 ntBASIC0.66□□□□□ -2.3
VBP1P61758 RNU1-17P-201ENST00000363022 152 ntBASIC0.65□□□□□ -2.31
VBP1P61758 RNU6-468P-201ENST00000384003 109 ntBASIC0.65□□□□□ -2.31
VBP1P61758 SNORA75B-201ENST00000384053 137 ntBASIC0.65□□□□□ -2.31
VBP1P61758 SNORA17.3-201ENST00000391159 129 ntBASIC0.65□□□□□ -2.31
VBP1P61758 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.65□□□□□ -2.31
VBP1P61758 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.65□□□□□ -2.31
VBP1P61758 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.65□□□□□ -2.31
VBP1P61758 RSL24D1P8-201ENST00000434442 492 ntBASIC0.65□□□□□ -2.31
VBP1P61758 MTCYBP42-201ENST00000444653 1130 ntBASIC0.65□□□□□ -2.31
VBP1P61758 HESX1-202ENST00000473921 757 ntTSL 5 BASIC0.65□□□□□ -2.31
VBP1P61758 PDCD5P2-201ENST00000507570 312 ntBASIC0.65□□□□□ -2.31
VBP1P61758 AC024589.1-201ENST00000512207 263 ntBASIC0.65□□□□□ -2.31
VBP1P61758 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC0.65□□□□□ -2.31
VBP1P61758 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.65□□□□□ -2.31
VBP1P61758 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC0.65□□□□□ -2.31
VBP1P61758 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.65□□□□□ -2.31
VBP1P61758 OR8K2P-201ENST00000524645 927 ntBASIC0.65□□□□□ -2.31
VBP1P61758 AC092325.1-201ENST00000566449 554 ntBASIC0.65□□□□□ -2.31
VBP1P61758 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC0.65□□□□□ -2.31
VBP1P61758 AC090186.1-201ENST00000605991 572 ntBASIC0.65□□□□□ -2.31
VBP1P61758 MIR6857-201ENST00000613267 93 ntBASIC0.65□□□□□ -2.31
VBP1P61758 DLEU1_1.1-201ENST00000618107 190 ntBASIC0.65□□□□□ -2.31
VBP1P61758 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.65□□□□□ -2.31
VBP1P61758 SNORD114-24-201ENST00000365029 72 ntBASIC0.64□□□□□ -2.31
VBP1P61758 MIR301A-201ENST00000385261 86 ntBASIC0.64□□□□□ -2.31
VBP1P61758 RNU6-1025P-201ENST00000410629 104 ntBASIC0.64□□□□□ -2.31
VBP1P61758 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC0.64□□□□□ -2.31
VBP1P61758 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC0.64□□□□□ -2.31
VBP1P61758 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC0.64□□□□□ -2.31
VBP1P61758 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC0.64□□□□□ -2.31
VBP1P61758 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.64□□□□□ -2.31
VBP1P61758 AC003071.1-201ENST00000451219 789 ntBASIC0.64□□□□□ -2.31
VBP1P61758 RNU7-59P-201ENST00000459101 61 ntBASIC0.64□□□□□ -2.31
VBP1P61758 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.64□□□□□ -2.31
VBP1P61758 RNU6-322P-201ENST00000516010 103 ntBASIC0.64□□□□□ -2.31
VBP1P61758 RNU6-334P-201ENST00000517072 102 ntBASIC0.64□□□□□ -2.31
VBP1P61758 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.64□□□□□ -2.31
VBP1P61758 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC0.64□□□□□ -2.31
VBP1P61758 SUMO2P18-201ENST00000518873 252 ntBASIC0.64□□□□□ -2.31
VBP1P61758 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC0.64□□□□□ -2.31
VBP1P61758 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC0.64□□□□□ -2.31
VBP1P61758 AL590229.1-201ENST00000603497 542 ntBASIC0.64□□□□□ -2.31
VBP1P61758 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC0.64□□□□□ -2.31
VBP1P61758 MIR340-201ENST00000362125 95 ntBASIC0.63□□□□□ -2.31
VBP1P61758 Y_RNA.534-201ENST00000384599 112 ntBASIC0.63□□□□□ -2.31
VBP1P61758 TIMM9P2-201ENST00000419324 266 ntBASIC0.63□□□□□ -2.31
VBP1P61758 AC083875.1-201ENST00000419509 405 ntBASIC0.63□□□□□ -2.31
VBP1P61758 AC010099.3-201ENST00000423896 409 ntBASIC0.63□□□□□ -2.31
VBP1P61758 AP000542.1-201ENST00000448473 371 ntBASIC0.63□□□□□ -2.31
VBP1P61758 AL513124.1-201ENST00000450410 614 ntBASIC0.63□□□□□ -2.31
VBP1P61758 ZNF886P-201ENST00000450781 723 ntBASIC0.63□□□□□ -2.31
VBP1P61758 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC0.63□□□□□ -2.31
VBP1P61758 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.63□□□□□ -2.31
VBP1P61758 MIR449C-201ENST00000516047 92 ntBASIC0.63□□□□□ -2.31
VBP1P61758 SNORA70.22-201ENST00000517160 124 ntBASIC0.63□□□□□ -2.31
VBP1P61758 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.63□□□□□ -2.31
VBP1P61758 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC0.63□□□□□ -2.31
VBP1P61758 MTND1P36-201ENST00000522384 936 ntBASIC0.63□□□□□ -2.31
VBP1P61758 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
VBP1P61758 RPS3AP4-201ENST00000555161 764 ntBASIC0.63□□□□□ -2.31
VBP1P61758 AL136520.1-202ENST00000555494 763 ntBASIC0.63□□□□□ -2.31
VBP1P61758 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC0.63□□□□□ -2.31
VBP1P61758 AL132657.2-201ENST00000564417 358 ntBASIC0.63□□□□□ -2.31
VBP1P61758 AL512347.1-201ENST00000566420 503 ntBASIC0.63□□□□□ -2.31
VBP1P61758 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms