Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 Y_RNA.350-201ENST00000365409 98 ntBASIC4.24□□□□□ -1.73
CHMP4BP1P59074 Y_RNA.562-201ENST00000384695 113 ntBASIC4.24□□□□□ -1.73
CHMP4BP1P59074 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC4.24□□□□□ -1.73
CHMP4BP1P59074 AC099548.1-201ENST00000421443 426 ntBASIC4.24□□□□□ -1.73
CHMP4BP1P59074 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC4.24□□□□□ -1.73
CHMP4BP1P59074 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.24□□□□□ -1.73
CHMP4BP1P59074 RPEP5-201ENST00000441137 268 ntBASIC4.24□□□□□ -1.73
CHMP4BP1P59074 U8.22-201ENST00000459141 133 ntBASIC4.24□□□□□ -1.73
CHMP4BP1P59074 AK3P2-201ENST00000507976 429 ntBASIC4.24□□□□□ -1.73
CHMP4BP1P59074 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.24□□□□□ -1.73
CHMP4BP1P59074 RNU1-103P-201ENST00000516502 125 ntBASIC4.24□□□□□ -1.73
CHMP4BP1P59074 RNU6-570P-201ENST00000517051 105 ntBASIC4.24□□□□□ -1.73
CHMP4BP1P59074 AC005476.1-201ENST00000554427 397 ntBASIC4.24□□□□□ -1.73
CHMP4BP1P59074 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.24□□□□□ -1.73
CHMP4BP1P59074 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.24□□□□□ -1.73
CHMP4BP1P59074 AP000787.2-201ENST00000604432 568 ntBASIC4.24□□□□□ -1.73
CHMP4BP1P59074 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
CHMP4BP1P59074 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CHMP4BP1P59074 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CHMP4BP1P59074 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CHMP4BP1P59074 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CHMP4BP1P59074 Y_RNA.489-201ENST00000384410 101 ntBASIC4.23□□□□□ -1.73
CHMP4BP1P59074 Y_RNA.518-201ENST00000384552 113 ntBASIC4.23□□□□□ -1.73
CHMP4BP1P59074 MIR491-201ENST00000384877 84 ntBASIC4.23□□□□□ -1.73
CHMP4BP1P59074 MIR34B-201ENST00000385076 84 ntBASIC4.23□□□□□ -1.73
CHMP4BP1P59074 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CHMP4BP1P59074 SAR1AP2-201ENST00000392696 594 ntBASIC4.23□□□□□ -1.73
CHMP4BP1P59074 AL078601.1-201ENST00000444542 271 ntBASIC4.23□□□□□ -1.73
CHMP4BP1P59074 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CHMP4BP1P59074 MTATP6P7-201ENST00000453315 681 ntBASIC4.23□□□□□ -1.73
CHMP4BP1P59074 RN7SL293P-201ENST00000481765 281 ntBASIC4.23□□□□□ -1.73
CHMP4BP1P59074 AC010469.2-201ENST00000496412 480 ntBASIC4.23□□□□□ -1.73
CHMP4BP1P59074 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.23□□□□□ -1.73
CHMP4BP1P59074 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.23□□□□□ -1.73
CHMP4BP1P59074 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.23□□□□□ -1.73
CHMP4BP1P59074 AL645944.1-201ENST00000603857 493 ntBASIC4.23□□□□□ -1.73
CHMP4BP1P59074 BRDTP1-201ENST00000605735 677 ntBASIC4.23□□□□□ -1.73
CHMP4BP1P59074 AC096772.1-201ENST00000609146 564 ntBASIC4.23□□□□□ -1.73
CHMP4BP1P59074 AC004852.3-201ENST00000614131 326 ntBASIC4.23□□□□□ -1.73
CHMP4BP1P59074 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.23□□□□□ -1.73
CHMP4BP1P59074 AL138880.2-201ENST00000616214 239 ntBASIC4.23□□□□□ -1.73
CHMP4BP1P59074 U7.8-201ENST00000619968 63 ntBASIC4.23□□□□□ -1.73
CHMP4BP1P59074 AL136164.4-201ENST00000625013 2135 ntBASIC4.23□□□□□ -1.73
CHMP4BP1P59074 U6.99-201ENST00000637524 83 ntBASIC4.23□□□□□ -1.73
CHMP4BP1P59074 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CHMP4BP1P59074 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
CHMP4BP1P59074 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHMP4BP1P59074 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
CHMP4BP1P59074 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CHMP4BP1P59074 RNA5SP295-201ENST00000362655 121 ntBASIC4.22□□□□□ -1.73
CHMP4BP1P59074 RNU1-73P-201ENST00000383971 164 ntBASIC4.22□□□□□ -1.73
CHMP4BP1P59074 Y_RNA.471-201ENST00000384312 102 ntBASIC4.22□□□□□ -1.73
CHMP4BP1P59074 SNORA69.1-201ENST00000390904 137 ntBASIC4.22□□□□□ -1.73
CHMP4BP1P59074 MIR1302-6-201ENST00000408466 90 ntBASIC4.22□□□□□ -1.73
CHMP4BP1P59074 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC4.22□□□□□ -1.73
CHMP4BP1P59074 AC106707.2-201ENST00000484182 374 ntBASIC4.22□□□□□ -1.73
CHMP4BP1P59074 RPL30P10-201ENST00000488148 337 ntBASIC4.22□□□□□ -1.73
CHMP4BP1P59074 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.22□□□□□ -1.73
CHMP4BP1P59074 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC4.22□□□□□ -1.73
CHMP4BP1P59074 AC007375.1-201ENST00000554513 578 ntBASIC4.22□□□□□ -1.73
CHMP4BP1P59074 H3F3AP1-201ENST00000559984 334 ntBASIC4.22□□□□□ -1.73
CHMP4BP1P59074 CYCSP39-201ENST00000565821 309 ntBASIC4.22□□□□□ -1.73
CHMP4BP1P59074 U6.105-201ENST00000637379 88 ntBASIC4.22□□□□□ -1.73
CHMP4BP1P59074 AP001148.1-201ENST00000624124 2359 ntBASIC4.22□□□□□ -1.73
CHMP4BP1P59074 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.22□□□□□ -1.73
CHMP4BP1P59074 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CHMP4BP1P59074 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CHMP4BP1P59074 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CHMP4BP1P59074 RNU6-78P-201ENST00000362897 107 ntBASIC4.21□□□□□ -1.74
CHMP4BP1P59074 MIR215-201ENST00000384858 110 ntBASIC4.21□□□□□ -1.74
CHMP4BP1P59074 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CHMP4BP1P59074 MIR548I3-201ENST00000408378 149 ntBASIC4.21□□□□□ -1.74
CHMP4BP1P59074 MIR548I1-201ENST00000408810 149 ntBASIC4.21□□□□□ -1.74
CHMP4BP1P59074 RPL26P27-201ENST00000414397 437 ntBASIC4.21□□□□□ -1.74
CHMP4BP1P59074 HMGN2P30-201ENST00000423237 256 ntBASIC4.21□□□□□ -1.74
CHMP4BP1P59074 RPL23AP22-201ENST00000437556 453 ntBASIC4.21□□□□□ -1.74
CHMP4BP1P59074 AC083863.1-201ENST00000438811 231 ntBASIC4.21□□□□□ -1.74
CHMP4BP1P59074 U8.21-201ENST00000459536 136 ntBASIC4.21□□□□□ -1.74
CHMP4BP1P59074 AC010265.1-201ENST00000513509 211 ntBASIC4.21□□□□□ -1.74
CHMP4BP1P59074 AC144568.1-201ENST00000520139 137 ntBASIC4.21□□□□□ -1.74
CHMP4BP1P59074 AC034114.1-201ENST00000520293 285 ntBASIC4.21□□□□□ -1.74
CHMP4BP1P59074 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC4.21□□□□□ -1.74
CHMP4BP1P59074 MIR5187-201ENST00000583479 76 ntBASIC4.21□□□□□ -1.74
CHMP4BP1P59074 AC130454.1-201ENST00000622948 401 ntBASIC4.21□□□□□ -1.74
CHMP4BP1P59074 U4.7-201ENST00000638126 106 ntBASIC4.21□□□□□ -1.74
CHMP4BP1P59074 OTUD4P1-201ENST00000237841 3067 ntBASIC4.21□□□□□ -1.74
CHMP4BP1P59074 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CHMP4BP1P59074 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
CHMP4BP1P59074 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CHMP4BP1P59074 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
CHMP4BP1P59074 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.2□□□□□ -1.74
CHMP4BP1P59074 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
CHMP4BP1P59074 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC4.2□□□□□ -1.74
CHMP4BP1P59074 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
CHMP4BP1P59074 RNU4-50P-201ENST00000364361 141 ntBASIC4.2□□□□□ -1.74
CHMP4BP1P59074 RNA5SP72-201ENST00000364442 117 ntBASIC4.2□□□□□ -1.74
CHMP4BP1P59074 RNU6-72P-201ENST00000384285 79 ntBASIC4.2□□□□□ -1.74
CHMP4BP1P59074 RNVU1-14-201ENST00000384770 164 ntBASIC4.2□□□□□ -1.74
CHMP4BP1P59074 MIR183-201ENST00000384958 110 ntBASIC4.2□□□□□ -1.74
CHMP4BP1P59074 MIR483-201ENST00000385070 76 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms