Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 AC010900.2-201ENST00000604508 210 ntBASIC1.32□□□□□ -2.2
RAB38P57729 AL139418.1-201ENST00000613613 177 ntBASIC1.32□□□□□ -2.2
RAB38P57729 AC007792.1-201ENST00000623023 402 ntBASIC1.32□□□□□ -2.2
RAB38P57729 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
RAB38P57729 Y_RNA.99-201ENST00000363138 105 ntBASIC1.31□□□□□ -2.2
RAB38P57729 Y_RNA.140-201ENST00000363474 103 ntBASIC1.31□□□□□ -2.2
RAB38P57729 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
RAB38P57729 SNORA48.1-201ENST00000390879 135 ntBASIC1.31□□□□□ -2.2
RAB38P57729 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.31□□□□□ -2.2
RAB38P57729 MTND1P20-201ENST00000430341 950 ntBASIC1.31□□□□□ -2.2
RAB38P57729 RPL22P17-201ENST00000438729 315 ntBASIC1.31□□□□□ -2.2
RAB38P57729 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.31□□□□□ -2.2
RAB38P57729 MTND1P12-201ENST00000455231 147 ntBASIC1.31□□□□□ -2.2
RAB38P57729 AC006026.2-201ENST00000457376 180 ntBASIC1.31□□□□□ -2.2
RAB38P57729 MTCYBP40-201ENST00000509390 1135 ntBASIC1.31□□□□□ -2.2
RAB38P57729 RNU6-237P-201ENST00000515985 71 ntBASIC1.31□□□□□ -2.2
RAB38P57729 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.31□□□□□ -2.2
RAB38P57729 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.31□□□□□ -2.2
RAB38P57729 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.31□□□□□ -2.2
RAB38P57729 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.31□□□□□ -2.2
RAB38P57729 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC1.31□□□□□ -2.2
RAB38P57729 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
RAB38P57729 ZNF680P1-201ENST00000436625 1469 ntBASIC1.31□□□□□ -2.2
RAB38P57729 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
RAB38P57729 CBX3P1-201ENST00000325243 554 ntBASIC1.3□□□□□ -2.2
RAB38P57729 Y_RNA.97-201ENST00000363094 102 ntBASIC1.3□□□□□ -2.2
RAB38P57729 RNU6-338P-201ENST00000383888 105 ntBASIC1.3□□□□□ -2.2
RAB38P57729 AC068050.1-201ENST00000394891 380 ntBASIC1.3□□□□□ -2.2
RAB38P57729 Y_RNA.597-201ENST00000410463 100 ntBASIC1.3□□□□□ -2.2
RAB38P57729 RNA5SP100-201ENST00000410903 110 ntBASIC1.3□□□□□ -2.2
RAB38P57729 RNA5SP59-201ENST00000410922 110 ntBASIC1.3□□□□□ -2.2
RAB38P57729 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.3□□□□□ -2.2
RAB38P57729 MTCYBP5-201ENST00000423752 1135 ntBASIC1.3□□□□□ -2.2
RAB38P57729 AC084290.1-201ENST00000434995 374 ntBASIC1.3□□□□□ -2.2
RAB38P57729 HMGB1P18-201ENST00000438801 619 ntBASIC1.3□□□□□ -2.2
RAB38P57729 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.3□□□□□ -2.2
RAB38P57729 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.3□□□□□ -2.2
RAB38P57729 GDI2P2-201ENST00000445131 608 ntBASIC1.3□□□□□ -2.2
RAB38P57729 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.3□□□□□ -2.2
RAB38P57729 RN7SKP210-201ENST00000459176 261 ntBASIC1.3□□□□□ -2.2
RAB38P57729 RNU7-95P-201ENST00000459222 64 ntBASIC1.3□□□□□ -2.2
RAB38P57729 RPL30P12-201ENST00000474666 353 ntBASIC1.3□□□□□ -2.2
RAB38P57729 AC021146.2-201ENST00000504736 556 ntBASIC1.3□□□□□ -2.2
RAB38P57729 HSPE1P23-201ENST00000509838 286 ntBASIC1.3□□□□□ -2.2
RAB38P57729 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.3□□□□□ -2.2
RAB38P57729 RNU6-991P-201ENST00000516168 107 ntBASIC1.3□□□□□ -2.2
RAB38P57729 RNA5SP458-201ENST00000516188 119 ntBASIC1.3□□□□□ -2.2
RAB38P57729 SNORA43.2-201ENST00000516652 128 ntBASIC1.3□□□□□ -2.2
RAB38P57729 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.3□□□□□ -2.2
RAB38P57729 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.3□□□□□ -2.2
RAB38P57729 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.3□□□□□ -2.2
RAB38P57729 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC1.3□□□□□ -2.2
RAB38P57729 BNIP3P6-201ENST00000549284 499 ntBASIC1.3□□□□□ -2.2
RAB38P57729 DNAJC19P9-201ENST00000555084 351 ntBASIC1.3□□□□□ -2.2
RAB38P57729 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.3□□□□□ -2.2
RAB38P57729 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.3□□□□□ -2.2
RAB38P57729 AL353778.1-201ENST00000603149 408 ntBASIC1.3□□□□□ -2.2
RAB38P57729 AP002360.4-201ENST00000606980 481 ntBASIC1.3□□□□□ -2.2
RAB38P57729 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.3□□□□□ -2.2
RAB38P57729 AC063943.3-201ENST00000615562 356 ntBASIC1.3□□□□□ -2.2
RAB38P57729 AL607023.1-201ENST00000620045 248 ntBASIC1.3□□□□□ -2.2
RAB38P57729 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.3□□□□□ -2.2
RAB38P57729 AP002782.1-201ENST00000623107 614 ntBASIC1.3□□□□□ -2.2
RAB38P57729 MIR1248-201ENST00000629190 106 ntBASIC1.3□□□□□ -2.2
RAB38P57729 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
RAB38P57729 AC073343.1-201ENST00000328239 651 ntBASIC1.29□□□□□ -2.2
RAB38P57729 SNORD56.1-201ENST00000362913 68 ntBASIC1.29□□□□□ -2.2
RAB38P57729 RNU6-203P-201ENST00000384038 104 ntBASIC1.29□□□□□ -2.2
RAB38P57729 RNU6-809P-201ENST00000384461 107 ntBASIC1.29□□□□□ -2.2
RAB38P57729 RNU6-1179P-201ENST00000384667 107 ntBASIC1.29□□□□□ -2.2
RAB38P57729 CISD1P1-201ENST00000393907 327 ntBASIC1.29□□□□□ -2.2
RAB38P57729 RPS3AP36-201ENST00000398190 775 ntBASIC1.29□□□□□ -2.2
RAB38P57729 RPL22P18-201ENST00000417197 377 ntBASIC1.29□□□□□ -2.2
RAB38P57729 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.29□□□□□ -2.2
RAB38P57729 RPS15AP10-201ENST00000432472 382 ntBASIC1.29□□□□□ -2.2
RAB38P57729 HMGB1P31-201ENST00000437242 427 ntBASIC1.29□□□□□ -2.2
RAB38P57729 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.29□□□□□ -2.2
RAB38P57729 RNVU1-2-201ENST00000516326 135 ntBASIC1.29□□□□□ -2.2
RAB38P57729 RNA5SP61-201ENST00000516453 100 ntBASIC1.29□□□□□ -2.2
RAB38P57729 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC1.29□□□□□ -2.2
RAB38P57729 ADI1P3-201ENST00000549509 470 ntBASIC1.29□□□□□ -2.2
RAB38P57729 AP001004.1-201ENST00000582468 324 ntBASIC1.29□□□□□ -2.2
RAB38P57729 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.29□□□□□ -2.2
RAB38P57729 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.29□□□□□ -2.2
RAB38P57729 RNU6-23P-201ENST00000363283 107 ntBASIC1.28□□□□□ -2.2
RAB38P57729 RNU6-384P-201ENST00000364900 104 ntBASIC1.28□□□□□ -2.2
RAB38P57729 RNU6-83P-201ENST00000384568 112 ntBASIC1.28□□□□□ -2.2
RAB38P57729 RNU6-906P-201ENST00000384700 70 ntBASIC1.28□□□□□ -2.2
RAB38P57729 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.28□□□□□ -2.2
RAB38P57729 CBX3P6-201ENST00000430257 527 ntBASIC1.28□□□□□ -2.2
RAB38P57729 RPL37P21-201ENST00000435890 276 ntBASIC1.28□□□□□ -2.2
RAB38P57729 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.28□□□□□ -2.2
RAB38P57729 AP000797.1-201ENST00000478870 387 ntBASIC1.28□□□□□ -2.2
RAB38P57729 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.28□□□□□ -2.2
RAB38P57729 RPL30P1-201ENST00000488676 339 ntBASIC1.28□□□□□ -2.2
RAB38P57729 AC112206.4-201ENST00000515142 405 ntBASIC1.28□□□□□ -2.2
RAB38P57729 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.28□□□□□ -2.2
RAB38P57729 COPS8P3-201ENST00000526024 482 ntBASIC1.28□□□□□ -2.2
RAB38P57729 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
RAB38P57729 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms