Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC1.51□□□□□ -2.17
CLDN18P56856 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.51□□□□□ -2.17
CLDN18P56856 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.51□□□□□ -2.17
CLDN18P56856 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC1.51□□□□□ -2.17
CLDN18P56856 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.51□□□□□ -2.17
CLDN18P56856 AC130454.1-201ENST00000622948 401 ntBASIC1.51□□□□□ -2.17
CLDN18P56856 AP002782.1-201ENST00000623107 614 ntBASIC1.51□□□□□ -2.17
CLDN18P56856 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.5□□□□□ -2.17
CLDN18P56856 SNORD48-201ENST00000364953 64 ntBASIC1.5□□□□□ -2.17
CLDN18P56856 AL354692.1-201ENST00000423044 315 ntBASIC1.5□□□□□ -2.17
CLDN18P56856 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.5□□□□□ -2.17
CLDN18P56856 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.5□□□□□ -2.17
CLDN18P56856 DUXAP8-207ENST00000456786 622 ntBASIC1.5□□□□□ -2.17
CLDN18P56856 snoU13.14-201ENST00000459372 104 ntBASIC1.5□□□□□ -2.17
CLDN18P56856 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.5□□□□□ -2.17
CLDN18P56856 FAM206BP-201ENST00000510179 541 ntBASIC1.5□□□□□ -2.17
CLDN18P56856 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.5□□□□□ -2.17
CLDN18P56856 CBX3P4-201ENST00000538909 354 ntBASIC1.5□□□□□ -2.17
CLDN18P56856 AC022254.1-201ENST00000567857 235 ntBASIC1.5□□□□□ -2.17
CLDN18P56856 AC137800.2-201ENST00000574375 120 ntBASIC1.5□□□□□ -2.17
CLDN18P56856 AL359999.1-201ENST00000604513 294 ntBASIC1.5□□□□□ -2.17
CLDN18P56856 OR4G3P-201ENST00000633500 913 ntBASIC1.5□□□□□ -2.17
CLDN18P56856 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.49□□□□□ -2.17
CLDN18P56856 RNU6-23P-201ENST00000363283 107 ntBASIC1.49□□□□□ -2.17
CLDN18P56856 RNU6-641P-201ENST00000384006 107 ntBASIC1.49□□□□□ -2.17
CLDN18P56856 MIR578-201ENST00000384828 96 ntBASIC1.49□□□□□ -2.17
CLDN18P56856 SNORA17.3-201ENST00000391159 129 ntBASIC1.49□□□□□ -2.17
CLDN18P56856 MIR934-201ENST00000401241 83 ntBASIC1.49□□□□□ -2.17
CLDN18P56856 RAP1BP3-201ENST00000407180 549 ntBASIC1.49□□□□□ -2.17
CLDN18P56856 AL008987.1-201ENST00000415528 237 ntBASIC1.49□□□□□ -2.17
CLDN18P56856 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CLDN18P56856 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC1.49□□□□□ -2.17
CLDN18P56856 ELOCP4-201ENST00000420090 333 ntBASIC1.49□□□□□ -2.17
CLDN18P56856 HMGB1P18-201ENST00000438801 619 ntBASIC1.49□□□□□ -2.17
CLDN18P56856 RPL39P29-201ENST00000447779 157 ntBASIC1.49□□□□□ -2.17
CLDN18P56856 RPL30P1-201ENST00000488676 339 ntBASIC1.49□□□□□ -2.17
CLDN18P56856 MTCYBP40-201ENST00000509390 1135 ntBASIC1.49□□□□□ -2.17
CLDN18P56856 AC117522.1-201ENST00000509821 380 ntBASIC1.49□□□□□ -2.17
CLDN18P56856 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.49□□□□□ -2.17
CLDN18P56856 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.49□□□□□ -2.17
CLDN18P56856 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC1.49□□□□□ -2.17
CLDN18P56856 RNU6-970P-201ENST00000516312 107 ntBASIC1.49□□□□□ -2.17
CLDN18P56856 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC1.49□□□□□ -2.17
CLDN18P56856 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC1.49□□□□□ -2.17
CLDN18P56856 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC1.49□□□□□ -2.17
CLDN18P56856 AC018630.3-201ENST00000542637 96 ntBASIC1.49□□□□□ -2.17
CLDN18P56856 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.49□□□□□ -2.17
CLDN18P56856 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC1.49□□□□□ -2.17
CLDN18P56856 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.49□□□□□ -2.17
CLDN18P56856 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CLDN18P56856 MIR3198-2-201ENST00000577868 80 ntBASIC1.49□□□□□ -2.17
CLDN18P56856 MIR5692A1-201ENST00000580523 69 ntBASIC1.49□□□□□ -2.17
CLDN18P56856 MIR4999-201ENST00000585029 91 ntBASIC1.49□□□□□ -2.17
CLDN18P56856 AP000811.1-201ENST00000603803 651 ntBASIC1.49□□□□□ -2.17
CLDN18P56856 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
CLDN18P56856 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CLDN18P56856 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
CLDN18P56856 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CLDN18P56856 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CLDN18P56856 Y_RNA.99-201ENST00000363138 105 ntBASIC1.48□□□□□ -2.17
CLDN18P56856 RNU6-527P-201ENST00000363425 104 ntBASIC1.48□□□□□ -2.17
CLDN18P56856 RNU5F-7P-201ENST00000363696 115 ntBASIC1.48□□□□□ -2.17
CLDN18P56856 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.48□□□□□ -2.17
CLDN18P56856 RNU6-997P-201ENST00000384725 107 ntBASIC1.48□□□□□ -2.17
CLDN18P56856 MIR30A-201ENST00000385092 71 ntBASIC1.48□□□□□ -2.17
CLDN18P56856 RNU2-39P-201ENST00000410604 198 ntBASIC1.48□□□□□ -2.17
CLDN18P56856 BTF3L4P1-201ENST00000413813 468 ntBASIC1.48□□□□□ -2.17
CLDN18P56856 AC009310.1-201ENST00000414414 451 ntBASIC1.48□□□□□ -2.17
CLDN18P56856 RPL21P90-201ENST00000415692 466 ntBASIC1.48□□□□□ -2.17
CLDN18P56856 RPL22P18-201ENST00000417197 377 ntBASIC1.48□□□□□ -2.17
CLDN18P56856 CBX3P6-201ENST00000430257 527 ntBASIC1.48□□□□□ -2.17
CLDN18P56856 AL591043.1-201ENST00000432461 424 ntBASIC1.48□□□□□ -2.17
CLDN18P56856 MTND5P2-201ENST00000442927 1142 ntBASIC1.48□□□□□ -2.17
CLDN18P56856 AL590365.1-201ENST00000450788 243 ntBASIC1.48□□□□□ -2.17
CLDN18P56856 RNU1-98P-201ENST00000458992 160 ntBASIC1.48□□□□□ -2.17
CLDN18P56856 AC027575.1-201ENST00000481064 460 ntBASIC1.48□□□□□ -2.17
CLDN18P56856 AC024614.2-201ENST00000577584 372 ntBASIC1.48□□□□□ -2.17
CLDN18P56856 WISP1-OT1-201ENST00000602893 642 ntBASIC1.48□□□□□ -2.17
CLDN18P56856 AC016925.2-201ENST00000605108 242 ntBASIC1.48□□□□□ -2.17
CLDN18P56856 AC105129.3-201ENST00000605455 485 ntBASIC1.48□□□□□ -2.17
CLDN18P56856 RNU6-87P-201ENST00000607561 108 ntBASIC1.48□□□□□ -2.17
CLDN18P56856 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
CLDN18P56856 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.47□□□□□ -2.17
CLDN18P56856 AC106754.1-201ENST00000562632 1513 ntBASIC1.47□□□□□ -2.17
CLDN18P56856 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CLDN18P56856 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CLDN18P56856 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
CLDN18P56856 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
CLDN18P56856 RNU6-1176P-201ENST00000390955 107 ntBASIC1.47□□□□□ -2.17
CLDN18P56856 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.47□□□□□ -2.17
CLDN18P56856 NCOR1P3-201ENST00000420479 303 ntBASIC1.47□□□□□ -2.17
CLDN18P56856 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC1.47□□□□□ -2.17
CLDN18P56856 AC007283.2-201ENST00000424739 197 ntBASIC1.47□□□□□ -2.17
CLDN18P56856 RPS15AP10-201ENST00000432472 382 ntBASIC1.47□□□□□ -2.17
CLDN18P56856 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.47□□□□□ -2.17
CLDN18P56856 AL122001.1-201ENST00000457027 370 ntBASIC1.47□□□□□ -2.17
CLDN18P56856 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC1.47□□□□□ -2.17
CLDN18P56856 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.47□□□□□ -2.17
CLDN18P56856 AC022880.1-201ENST00000534017 973 ntBASIC1.47□□□□□ -2.17
CLDN18P56856 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC1.47□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms