Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
PEX3P56589 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.33□□□□□ -2.04
PEX3P56589 ZNF720P1-201ENST00000562403 1939 ntBASIC2.32□□□□□ -2.04
PEX3P56589 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
PEX3P56589 ADAM3A-203ENST00000461344 2157 ntBASIC2.32□□□□□ -2.04
PEX3P56589 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
PEX3P56589 Y_RNA.372-201ENST00000365599 102 ntBASIC2.32□□□□□ -2.04
PEX3P56589 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
PEX3P56589 SNORA69-201ENST00000383895 132 ntBASIC2.32□□□□□ -2.04
PEX3P56589 Y_RNA.481-201ENST00000384373 102 ntBASIC2.32□□□□□ -2.04
PEX3P56589 MIR10A-201ENST00000385043 110 ntBASIC2.32□□□□□ -2.04
PEX3P56589 MIR524-201ENST00000385242 87 ntBASIC2.32□□□□□ -2.04
PEX3P56589 RNU6-908P-201ENST00000410160 94 ntBASIC2.32□□□□□ -2.04
PEX3P56589 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.32□□□□□ -2.04
PEX3P56589 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.32□□□□□ -2.04
PEX3P56589 USP9YP27-201ENST00000418455 438 ntBASIC2.32□□□□□ -2.04
PEX3P56589 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.32□□□□□ -2.04
PEX3P56589 AC009296.1-201ENST00000443146 155 ntBASIC2.32□□□□□ -2.04
PEX3P56589 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC2.32□□□□□ -2.04
PEX3P56589 SCARNA18-201ENST00000459004 134 ntBASIC2.32□□□□□ -2.04
PEX3P56589 AC082651.2-201ENST00000496833 166 ntBASIC2.32□□□□□ -2.04
PEX3P56589 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC2.32□□□□□ -2.04
PEX3P56589 LRRC34P2-201ENST00000514850 553 ntBASIC2.32□□□□□ -2.04
PEX3P56589 RNU5F-8P-201ENST00000515941 111 ntBASIC2.32□□□□□ -2.04
PEX3P56589 RNU6-581P-201ENST00000516214 105 ntBASIC2.32□□□□□ -2.04
PEX3P56589 MIR892C-201ENST00000516410 77 ntBASIC2.32□□□□□ -2.04
PEX3P56589 RNU6-1178P-201ENST00000516674 107 ntBASIC2.32□□□□□ -2.04
PEX3P56589 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.32□□□□□ -2.04
PEX3P56589 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.32□□□□□ -2.04
PEX3P56589 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.32□□□□□ -2.04
PEX3P56589 MIR5692A1-201ENST00000580523 69 ntBASIC2.32□□□□□ -2.04
PEX3P56589 MIR5002-201ENST00000584713 97 ntBASIC2.32□□□□□ -2.04
PEX3P56589 AC025165.5-201ENST00000602802 578 ntBASIC2.32□□□□□ -2.04
PEX3P56589 MIR6840-201ENST00000611937 71 ntBASIC2.32□□□□□ -2.04
PEX3P56589 AC022418.1-201ENST00000624118 445 ntBASIC2.32□□□□□ -2.04
PEX3P56589 AC098679.4-201ENST00000624241 654 ntBASIC2.32□□□□□ -2.04
PEX3P56589 AP003400.5-201ENST00000624827 617 ntBASIC2.32□□□□□ -2.04
PEX3P56589 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.32□□□□□ -2.04
PEX3P56589 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.32□□□□□ -2.04
PEX3P56589 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.32□□□□□ -2.04
PEX3P56589 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.32□□□□□ -2.04
PEX3P56589 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.32□□□□□ -2.04
PEX3P56589 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.31□□□□□ -2.04
PEX3P56589 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PEX3P56589 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
PEX3P56589 RNU6-1303P-201ENST00000364841 107 ntBASIC2.31□□□□□ -2.04
PEX3P56589 RNU4-20P-201ENST00000365601 151 ntBASIC2.31□□□□□ -2.04
PEX3P56589 RNU6-1215P-201ENST00000384441 102 ntBASIC2.31□□□□□ -2.04
PEX3P56589 MIR514A2-201ENST00000385131 88 ntBASIC2.31□□□□□ -2.04
PEX3P56589 MIR514A3-201ENST00000385132 88 ntBASIC2.31□□□□□ -2.04
PEX3P56589 RNU6-1328P-201ENST00000410938 106 ntBASIC2.31□□□□□ -2.04
PEX3P56589 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.31□□□□□ -2.04
PEX3P56589 OOSP1P1-201ENST00000423265 274 ntBASIC2.31□□□□□ -2.04
PEX3P56589 WARS2P1-201ENST00000429678 537 ntBASIC2.31□□□□□ -2.04
PEX3P56589 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.31□□□□□ -2.04
PEX3P56589 AC004383.1-201ENST00000438135 289 ntBASIC2.31□□□□□ -2.04
PEX3P56589 MTND1P34-201ENST00000438556 671 ntBASIC2.31□□□□□ -2.04
PEX3P56589 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.31□□□□□ -2.04
PEX3P56589 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.31□□□□□ -2.04
PEX3P56589 OSTCP8-201ENST00000445117 448 ntBASIC2.31□□□□□ -2.04
PEX3P56589 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.31□□□□□ -2.04
PEX3P56589 SNRPFP3-201ENST00000457792 225 ntBASIC2.31□□□□□ -2.04
PEX3P56589 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.31□□□□□ -2.04
PEX3P56589 AC079804.2-201ENST00000490376 200 ntBASIC2.31□□□□□ -2.04
PEX3P56589 HMGB1P30-201ENST00000492455 606 ntBASIC2.31□□□□□ -2.04
PEX3P56589 GZMAP1-201ENST00000503054 631 ntBASIC2.31□□□□□ -2.04
PEX3P56589 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PEX3P56589 SNORA25.17-201ENST00000517184 124 ntBASIC2.31□□□□□ -2.04
PEX3P56589 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.31□□□□□ -2.04
PEX3P56589 OR5AQ1P-201ENST00000527596 927 ntBASIC2.31□□□□□ -2.04
PEX3P56589 AL157687.1-201ENST00000554853 619 ntBASIC2.31□□□□□ -2.04
PEX3P56589 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.31□□□□□ -2.04
PEX3P56589 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.31□□□□□ -2.04
PEX3P56589 AC007151.1-201ENST00000572774 483 ntBASIC2.31□□□□□ -2.04
PEX3P56589 MIR5694-201ENST00000581190 76 ntBASIC2.31□□□□□ -2.04
PEX3P56589 AL355877.2-201ENST00000603670 358 ntBASIC2.31□□□□□ -2.04
PEX3P56589 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.31□□□□□ -2.04
PEX3P56589 AC090517.2-201ENST00000614966 680 ntBASIC2.31□□□□□ -2.04
PEX3P56589 U6.42-201ENST00000618440 107 ntBASIC2.31□□□□□ -2.04
PEX3P56589 MIR219B-201ENST00000637023 88 ntBASIC2.31□□□□□ -2.04
PEX3P56589 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.31□□□□□ -2.04
PEX3P56589 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.31□□□□□ -2.04
PEX3P56589 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PEX3P56589 Y_RNA.167-201ENST00000363735 109 ntBASIC2.3□□□□□ -2.04
PEX3P56589 SNORA6-201ENST00000384033 151 ntBASIC2.3□□□□□ -2.04
PEX3P56589 RNU6-393P-201ENST00000384475 107 ntBASIC2.3□□□□□ -2.04
PEX3P56589 Y_RNA.554-201ENST00000384672 102 ntBASIC2.3□□□□□ -2.04
PEX3P56589 SNORD70.1-201ENST00000391007 85 ntBASIC2.3□□□□□ -2.04
PEX3P56589 PTGES3P4-201ENST00000426243 356 ntBASIC2.3□□□□□ -2.04
PEX3P56589 IPO7P1-201ENST00000442031 636 ntBASIC2.3□□□□□ -2.04
PEX3P56589 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.3□□□□□ -2.04
PEX3P56589 AC233279.1-201ENST00000455300 423 ntBASIC2.3□□□□□ -2.04
PEX3P56589 BTF3P15-201ENST00000455606 336 ntBASIC2.3□□□□□ -2.04
PEX3P56589 RPL7P43-201ENST00000478876 753 ntBASIC2.3□□□□□ -2.04
PEX3P56589 AC116655.1-201ENST00000508324 901 ntBASIC2.3□□□□□ -2.04
PEX3P56589 ACA59.2-201ENST00000517061 156 ntBASIC2.3□□□□□ -2.04
PEX3P56589 AC090115.3-201ENST00000553218 849 ntBASIC2.3□□□□□ -2.04
PEX3P56589 AL512360.1-201ENST00000555346 234 ntBASIC2.3□□□□□ -2.04
PEX3P56589 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.3□□□□□ -2.04
PEX3P56589 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms