Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.7□□□□□ -2.14
CDH6P55285 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CDH6P55285 RNA5SP363-201ENST00000365072 115 ntBASIC1.69□□□□□ -2.14
CDH6P55285 RNU5E-5P-201ENST00000365379 116 ntBASIC1.69□□□□□ -2.14
CDH6P55285 SNORD14D-201ENST00000384390 87 ntBASIC1.69□□□□□ -2.14
CDH6P55285 MIR578-201ENST00000384828 96 ntBASIC1.69□□□□□ -2.14
CDH6P55285 MIR504-201ENST00000385065 83 ntBASIC1.69□□□□□ -2.14
CDH6P55285 AL033519.2-201ENST00000403958 392 ntBASIC1.69□□□□□ -2.14
CDH6P55285 MIR1262-201ENST00000408276 93 ntBASIC1.69□□□□□ -2.14
CDH6P55285 RNU2-39P-201ENST00000410604 198 ntBASIC1.69□□□□□ -2.14
CDH6P55285 RN7SKP101-201ENST00000411376 320 ntBASIC1.69□□□□□ -2.14
CDH6P55285 SRIP3-201ENST00000413200 219 ntBASIC1.69□□□□□ -2.14
CDH6P55285 AL358453.1-201ENST00000422522 250 ntBASIC1.69□□□□□ -2.14
CDH6P55285 EIF4EP2-201ENST00000422816 654 ntBASIC1.69□□□□□ -2.14
CDH6P55285 AL356583.2-201ENST00000426536 280 ntBASIC1.69□□□□□ -2.14
CDH6P55285 TOMM20P4-201ENST00000427861 435 ntBASIC1.69□□□□□ -2.14
CDH6P55285 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.69□□□□□ -2.14
CDH6P55285 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC1.69□□□□□ -2.14
CDH6P55285 USP9YP12-201ENST00000450481 570 ntBASIC1.69□□□□□ -2.14
CDH6P55285 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC1.69□□□□□ -2.14
CDH6P55285 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.69□□□□□ -2.14
CDH6P55285 AC117522.1-201ENST00000509821 380 ntBASIC1.69□□□□□ -2.14
CDH6P55285 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.69□□□□□ -2.14
CDH6P55285 PTP4A1P4-201ENST00000512479 322 ntBASIC1.69□□□□□ -2.14
CDH6P55285 RNU6-415P-201ENST00000516252 97 ntBASIC1.69□□□□□ -2.14
CDH6P55285 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
CDH6P55285 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.69□□□□□ -2.14
CDH6P55285 AC012065.4-201ENST00000602445 679 ntBASIC1.69□□□□□ -2.14
CDH6P55285 CLPTM1LP1-201ENST00000604519 484 ntBASIC1.69□□□□□ -2.14
CDH6P55285 AC004908.3-201ENST00000610248 625 ntBASIC1.69□□□□□ -2.14
CDH6P55285 AC138749.5-201ENST00000611461 208 ntBASIC1.69□□□□□ -2.14
CDH6P55285 MIR7844-201ENST00000616161 122 ntBASIC1.69□□□□□ -2.14
CDH6P55285 AC116165.2-201ENST00000616705 206 ntBASIC1.69□□□□□ -2.14
CDH6P55285 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.68□□□□□ -2.14
CDH6P55285 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CDH6P55285 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.68□□□□□ -2.14
CDH6P55285 RNU6-384P-201ENST00000364900 104 ntBASIC1.68□□□□□ -2.14
CDH6P55285 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
CDH6P55285 SNORA24.1-201ENST00000384401 135 ntBASIC1.68□□□□□ -2.14
CDH6P55285 RPS3AP36-201ENST00000398190 775 ntBASIC1.68□□□□□ -2.14
CDH6P55285 RAP1BP3-201ENST00000407180 549 ntBASIC1.68□□□□□ -2.14
CDH6P55285 RPS20P15-201ENST00000412792 311 ntBASIC1.68□□□□□ -2.14
CDH6P55285 AL031779.1-201ENST00000415663 330 ntBASIC1.68□□□□□ -2.14
CDH6P55285 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.68□□□□□ -2.14
CDH6P55285 BX510359.4-201ENST00000423750 193 ntBASIC1.68□□□□□ -2.14
CDH6P55285 HSPE1P21-201ENST00000438283 308 ntBASIC1.68□□□□□ -2.14
CDH6P55285 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.68□□□□□ -2.14
CDH6P55285 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.68□□□□□ -2.14
CDH6P55285 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC1.68□□□□□ -2.14
CDH6P55285 CBX3P4-201ENST00000538909 354 ntBASIC1.68□□□□□ -2.14
CDH6P55285 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.68□□□□□ -2.14
CDH6P55285 BNIP3P6-201ENST00000549284 499 ntBASIC1.68□□□□□ -2.14
CDH6P55285 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC1.68□□□□□ -2.14
CDH6P55285 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.68□□□□□ -2.14
CDH6P55285 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.68□□□□□ -2.14
CDH6P55285 MIR4713-201ENST00000582691 75 ntBASIC1.68□□□□□ -2.14
CDH6P55285 AC112191.3-201ENST00000604371 277 ntBASIC1.68□□□□□ -2.14
CDH6P55285 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC1.68□□□□□ -2.14
CDH6P55285 AC068944.2-201ENST00000610373 403 ntBASIC1.68□□□□□ -2.14
CDH6P55285 U1.36-201ENST00000620684 176 ntBASIC1.68□□□□□ -2.14
CDH6P55285 AC009878.1-201ENST00000621819 340 ntBASIC1.68□□□□□ -2.14
CDH6P55285 AL157786.1-207ENST00000627771 695 ntBASIC1.68□□□□□ -2.14
CDH6P55285 AC241585.2-209ENST00000638217 143 ntBASIC1.68□□□□□ -2.14
CDH6P55285 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.68□□□□□ -2.14
CDH6P55285 RNU6-944P-201ENST00000364023 107 ntBASIC1.67□□□□□ -2.14
CDH6P55285 MIR558-201ENST00000384920 94 ntBASIC1.67□□□□□ -2.14
CDH6P55285 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
CDH6P55285 RNU11-3P-201ENST00000391111 133 ntBASIC1.67□□□□□ -2.14
CDH6P55285 RNA5SP111-201ENST00000411386 101 ntBASIC1.67□□□□□ -2.14
CDH6P55285 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.67□□□□□ -2.14
CDH6P55285 CYCSP49-201ENST00000420810 319 ntBASIC1.67□□□□□ -2.14
CDH6P55285 MTCYBP5-201ENST00000423752 1135 ntBASIC1.67□□□□□ -2.14
CDH6P55285 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC1.67□□□□□ -2.14
CDH6P55285 RBBP4P6-201ENST00000508098 202 ntBASIC1.67□□□□□ -2.14
CDH6P55285 RN7SKP265-201ENST00000516448 223 ntBASIC1.67□□□□□ -2.14
CDH6P55285 RNU6-1220P-201ENST00000517126 108 ntBASIC1.67□□□□□ -2.14
CDH6P55285 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.67□□□□□ -2.14
CDH6P55285 DEFB122-202ENST00000569013 197 ntBASIC1.67□□□□□ -2.14
CDH6P55285 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC1.67□□□□□ -2.14
CDH6P55285 SEPT7P9-203ENST00000604116 343 ntBASIC1.67□□□□□ -2.14
CDH6P55285 AC004223.4-201ENST00000612426 332 ntBASIC1.67□□□□□ -2.14
CDH6P55285 AC099654.13-201ENST00000639774 207 ntBASIC1.67□□□□□ -2.14
CDH6P55285 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.67□□□□□ -2.14
CDH6P55285 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.67□□□□□ -2.14
CDH6P55285 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
CDH6P55285 AC006026.1-201ENST00000444025 1803 ntBASIC1.66□□□□□ -2.14
CDH6P55285 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
CDH6P55285 BTF3L4P1-201ENST00000413813 468 ntBASIC1.66□□□□□ -2.14
CDH6P55285 HIGD1AP15-201ENST00000416198 280 ntBASIC1.66□□□□□ -2.14
CDH6P55285 PGBD4P6-201ENST00000421501 610 ntBASIC1.66□□□□□ -2.14
CDH6P55285 UBE2V1P4-201ENST00000425374 344 ntBASIC1.66□□□□□ -2.14
CDH6P55285 IFNA20P-201ENST00000436840 528 ntBASIC1.66□□□□□ -2.14
CDH6P55285 HMGB1P31-201ENST00000437242 427 ntBASIC1.66□□□□□ -2.14
CDH6P55285 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.66□□□□□ -2.14
CDH6P55285 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.66□□□□□ -2.14
CDH6P55285 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC1.66□□□□□ -2.14
CDH6P55285 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.66□□□□□ -2.14
CDH6P55285 Y_RNA.672-201ENST00000516289 104 ntBASIC1.66□□□□□ -2.14
CDH6P55285 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.66□□□□□ -2.14
CDH6P55285 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms