Protein–RNA interactions for Protein: P49642

PRIM1, DNA primase small subunit, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1P49642 MIR3674-201ENST00000636576 68 ntBASIC5.6□□□□□ -1.51
PRIM1P49642 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
PRIM1P49642 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PRIM1P49642 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
PRIM1P49642 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
PRIM1P49642 AC006971.1-201ENST00000407916 4486 ntBASIC5.6□□□□□ -1.51
PRIM1P49642 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PRIM1P49642 AC022336.2-201ENST00000568966 2538 ntBASIC5.59□□□□□ -1.51
PRIM1P49642 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PRIM1P49642 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PRIM1P49642 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PRIM1P49642 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PRIM1P49642 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
PRIM1P49642 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC5.59□□□□□ -1.51
PRIM1P49642 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.51
PRIM1P49642 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
PRIM1P49642 SRP72P2-201ENST00000344851 1979 ntBASIC5.59□□□□□ -1.51
PRIM1P49642 MIR200C-201ENST00000384980 68 ntBASIC5.59□□□□□ -1.51
PRIM1P49642 RNA5SP372-201ENST00000390836 115 ntBASIC5.59□□□□□ -1.51
PRIM1P49642 AL512633.1-201ENST00000399931 655 ntBASIC5.59□□□□□ -1.51
PRIM1P49642 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PRIM1P49642 AC092047.1-201ENST00000424997 240 ntBASIC5.59□□□□□ -1.51
PRIM1P49642 AL451050.1-201ENST00000450126 415 ntBASIC5.59□□□□□ -1.51
PRIM1P49642 Y_RNA.637-201ENST00000459424 114 ntBASIC5.59□□□□□ -1.51
PRIM1P49642 AL592156.1-201ENST00000508758 304 ntBASIC5.59□□□□□ -1.51
PRIM1P49642 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC5.59□□□□□ -1.51
PRIM1P49642 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC5.59□□□□□ -1.51
PRIM1P49642 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.59□□□□□ -1.51
PRIM1P49642 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PRIM1P49642 AC090616.3-201ENST00000582184 217 ntBASIC5.59□□□□□ -1.51
PRIM1P49642 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
PRIM1P49642 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PRIM1P49642 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC5.59□□□□□ -1.51
PRIM1P49642 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
PRIM1P49642 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.52
PRIM1P49642 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.59□□□□□ -1.52
PRIM1P49642 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
PRIM1P49642 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.52
PRIM1P49642 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PRIM1P49642 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PRIM1P49642 SNORD46.1-201ENST00000364139 104 ntBASIC5.58□□□□□ -1.52
PRIM1P49642 RNU6-818P-201ENST00000364837 108 ntBASIC5.58□□□□□ -1.52
PRIM1P49642 RNU1-140P-201ENST00000365040 165 ntBASIC5.58□□□□□ -1.52
PRIM1P49642 RNU6-140P-201ENST00000384566 108 ntBASIC5.58□□□□□ -1.52
PRIM1P49642 SNORA8.3-201ENST00000384679 139 ntBASIC5.58□□□□□ -1.52
PRIM1P49642 SNORA26.3-201ENST00000391119 136 ntBASIC5.58□□□□□ -1.52
PRIM1P49642 RNU6-1199P-201ENST00000411249 104 ntBASIC5.58□□□□□ -1.52
PRIM1P49642 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC5.58□□□□□ -1.52
PRIM1P49642 AC012306.1-201ENST00000423267 114 ntBASIC5.58□□□□□ -1.52
PRIM1P49642 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC5.58□□□□□ -1.52
PRIM1P49642 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.58□□□□□ -1.52
PRIM1P49642 AL500522.2-201ENST00000448562 343 ntBASIC5.58□□□□□ -1.52
PRIM1P49642 AC007215.1-201ENST00000464893 276 ntBASIC5.58□□□□□ -1.52
PRIM1P49642 PDCD5P2-201ENST00000507570 312 ntBASIC5.58□□□□□ -1.52
PRIM1P49642 SNORA31.8-201ENST00000516327 108 ntBASIC5.58□□□□□ -1.52
PRIM1P49642 CKS1BP7-201ENST00000522230 235 ntBASIC5.58□□□□□ -1.52
PRIM1P49642 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.58□□□□□ -1.52
PRIM1P49642 HSPE1P5-201ENST00000561489 272 ntBASIC5.58□□□□□ -1.52
PRIM1P49642 AL670379.2-201ENST00000604983 252 ntBASIC5.58□□□□□ -1.52
PRIM1P49642 AL354798.1-201ENST00000622505 329 ntBASIC5.58□□□□□ -1.52
PRIM1P49642 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC5.58□□□□□ -1.52
PRIM1P49642 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PRIM1P49642 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.58□□□□□ -1.52
PRIM1P49642 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PRIM1P49642 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
PRIM1P49642 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC5.58□□□□□ -1.52
PRIM1P49642 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
PRIM1P49642 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.58□□□□□ -1.52
PRIM1P49642 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PRIM1P49642 BBX-203ENST00000402543 3980 ntTSL 5 BASIC5.57□□□□□ -1.52
PRIM1P49642 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRIM1P49642 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PRIM1P49642 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
PRIM1P49642 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC5.57□□□□□ -1.52
PRIM1P49642 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PRIM1P49642 RNU1-62P-201ENST00000362599 164 ntBASIC5.57□□□□□ -1.52
PRIM1P49642 RNU6-898P-201ENST00000365627 104 ntBASIC5.57□□□□□ -1.52
PRIM1P49642 Z98749.2-208ENST00000381646 500 ntBASIC5.57□□□□□ -1.52
PRIM1P49642 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.57□□□□□ -1.52
PRIM1P49642 CRYBB2P1-203ENST00000415709 538 ntBASIC5.57□□□□□ -1.52
PRIM1P49642 snoU13.24-201ENST00000458998 104 ntBASIC5.57□□□□□ -1.52
PRIM1P49642 RPL30P12-201ENST00000474666 353 ntBASIC5.57□□□□□ -1.52
PRIM1P49642 CYCTP-201ENST00000504253 315 ntBASIC5.57□□□□□ -1.52
PRIM1P49642 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC5.57□□□□□ -1.52
PRIM1P49642 SNORA70.16-201ENST00000516390 95 ntBASIC5.57□□□□□ -1.52
PRIM1P49642 RNA5SP73-201ENST00000516744 108 ntBASIC5.57□□□□□ -1.52
PRIM1P49642 AC024614.2-201ENST00000577584 372 ntBASIC5.57□□□□□ -1.52
PRIM1P49642 MIR5688-201ENST00000580619 83 ntBASIC5.57□□□□□ -1.52
PRIM1P49642 AC069294.1-201ENST00000608397 350 ntBASIC5.57□□□□□ -1.52
PRIM1P49642 AC069200.1-201ENST00000609511 323 ntBASIC5.57□□□□□ -1.52
PRIM1P49642 TEX41-243ENST00000614173 190 ntTSL 5 BASIC5.57□□□□□ -1.52
PRIM1P49642 MIR6134-201ENST00000617606 109 ntBASIC5.57□□□□□ -1.52
PRIM1P49642 AC140113.4-201ENST00000622087 222 ntBASIC5.57□□□□□ -1.52
PRIM1P49642 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.57□□□□□ -1.52
PRIM1P49642 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.57□□□□□ -1.52
PRIM1P49642 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRIM1P49642 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
PRIM1P49642 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
PRIM1P49642 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
PRIM1P49642 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms