Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.43□□□□□ -2.02
NEDD4P46934 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
NEDD4P46934 Y_RNA.381-201ENST00000365666 102 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 RNU6-1127P-201ENST00000384580 107 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 SNORD70.1-201ENST00000391007 85 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 CIR1P3-201ENST00000405137 479 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 MTCO1P21-201ENST00000416634 589 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.42□□□□□ -2.02
NEDD4P46934 SEPT14P3-201ENST00000439401 183 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 AL161651.1-201ENST00000440882 223 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.42□□□□□ -2.02
NEDD4P46934 AL732372.2-207ENST00000445840 183 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 SEPT14P2-201ENST00000453405 183 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 RPL31P41-201ENST00000477967 372 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.42□□□□□ -2.02
NEDD4P46934 AC091885.1-201ENST00000506658 268 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC2.42□□□□□ -2.02
NEDD4P46934 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.42□□□□□ -2.02
NEDD4P46934 SEPT14P4-201ENST00000513445 186 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 MIR892C-201ENST00000516410 77 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.42□□□□□ -2.02
NEDD4P46934 FO082796.1-201ENST00000523795 183 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.42□□□□□ -2.02
NEDD4P46934 MTCO3P23-201ENST00000561363 289 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 AC136619.2-201ENST00000563361 631 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 AC092325.1-201ENST00000566449 554 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.42□□□□□ -2.02
NEDD4P46934 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 AC022418.1-201ENST00000624118 445 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 AL359757.2-201ENST00000624309 274 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.42□□□□□ -2.02
NEDD4P46934 AC068137.3-201ENST00000639191 341 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 AC073869.6-201ENST00000640656 341 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
NEDD4P46934 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.42□□□□□ -2.02
NEDD4P46934 AL354685.2-201ENST00000448218 1447 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.42□□□□□ -2.02
NEDD4P46934 RNY4P14-201ENST00000363656 96 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 SNORD14B-201ENST00000364533 90 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 RNA5SP160-201ENST00000364866 120 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 RNU6-1280P-201ENST00000365211 107 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 Y_RNA.402-201ENST00000383972 102 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 RNU6-483P-201ENST00000384088 108 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 MIR518D-201ENST00000385014 87 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 AL606923.1-201ENST00000406616 190 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 RAP1BP3-201ENST00000407180 549 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 RNU4-26P-201ENST00000410270 107 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 FCF1P9-201ENST00000412546 282 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.42□□□□□ -2.02
NEDD4P46934 USP9YP18-201ENST00000425912 695 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.42□□□□□ -2.02
NEDD4P46934 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.42□□□□□ -2.02
NEDD4P46934 TRAPPC2P3-201ENST00000443200 321 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC2.42□□□□□ -2.02
NEDD4P46934 AC011005.2-201ENST00000487324 359 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 FAM92A1P2-202ENST00000504766 877 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 SEM1P1-201ENST00000506694 209 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 AC116655.1-201ENST00000508324 901 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.42□□□□□ -2.02
NEDD4P46934 AL121821.2-201ENST00000556081 394 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 MIR4424-201ENST00000585257 86 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 AC073539.2-201ENST00000597113 165 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 AL391813.1-201ENST00000603098 260 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 SNRPGP19-201ENST00000603826 189 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 AC004492.1-201ENST00000607036 742 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 uc_338.34-201ENST00000617467 174 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 YWHAEP7-203ENST00000622054 312 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 MIR219B-201ENST00000637023 88 ntBASIC2.42□□□□□ -2.02
NEDD4P46934 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.41□□□□□ -2.02
NEDD4P46934 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
NEDD4P46934 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
NEDD4P46934 SNORD3E-201ENST00000362899 217 ntBASIC2.41□□□□□ -2.02
NEDD4P46934 Y_RNA.480-201ENST00000384364 102 ntBASIC2.41□□□□□ -2.02
NEDD4P46934 SNORA51.11-201ENST00000384442 131 ntBASIC2.41□□□□□ -2.02
NEDD4P46934 Y_RNA.573-201ENST00000384763 105 ntBASIC2.41□□□□□ -2.02
NEDD4P46934 MIR10A-201ENST00000385043 110 ntBASIC2.41□□□□□ -2.02
NEDD4P46934 RNU6-648P-201ENST00000410190 107 ntBASIC2.41□□□□□ -2.02
NEDD4P46934 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.41□□□□□ -2.02
NEDD4P46934 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.41□□□□□ -2.02
NEDD4P46934 TOMM20P4-201ENST00000427861 435 ntBASIC2.41□□□□□ -2.02
NEDD4P46934 AL445646.1-201ENST00000431784 216 ntBASIC2.41□□□□□ -2.02
NEDD4P46934 OSTCP8-201ENST00000445117 448 ntBASIC2.41□□□□□ -2.02
NEDD4P46934 Z96811.1-201ENST00000445880 108 ntBASIC2.41□□□□□ -2.02
NEDD4P46934 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC2.41□□□□□ -2.02
NEDD4P46934 AC006026.2-201ENST00000457376 180 ntBASIC2.41□□□□□ -2.02
NEDD4P46934 AP000852.1-201ENST00000472460 573 ntBASIC2.41□□□□□ -2.02
NEDD4P46934 MTAPP1-201ENST00000489154 819 ntBASIC2.41□□□□□ -2.02
NEDD4P46934 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.41□□□□□ -2.02
NEDD4P46934 MTCO3P9-201ENST00000506989 781 ntBASIC2.41□□□□□ -2.02
NEDD4P46934 MTND3P25-201ENST00000509243 135 ntBASIC2.41□□□□□ -2.02
NEDD4P46934 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.41□□□□□ -2.02
NEDD4P46934 RNA5SP401-201ENST00000515920 127 ntBASIC2.41□□□□□ -2.02
NEDD4P46934 RNU2-69P-201ENST00000516061 100 ntBASIC2.41□□□□□ -2.02
NEDD4P46934 Y_RNA.704-201ENST00000516851 102 ntBASIC2.41□□□□□ -2.02
NEDD4P46934 SNORD60.2-201ENST00000516883 86 ntBASIC2.41□□□□□ -2.02
NEDD4P46934 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.41□□□□□ -2.02
NEDD4P46934 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.41□□□□□ -2.02
NEDD4P46934 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.41□□□□□ -2.02
NEDD4P46934 AC109635.3-201ENST00000529536 185 ntBASIC2.41□□□□□ -2.02
NEDD4P46934 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms