Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AL132822.1-201ENST00000617063 513 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 AC108479.2-201ENST00000617314 601 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 AC099654.13-201ENST00000639774 207 ntBASIC1.65□□□□□ -2.15
SLC1A1P43005 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC1.65□□□□□ -2.15
SLC1A1P43005 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SLC1A1P43005 Y_RNA.22-201ENST00000362492 102 ntBASIC1.64□□□□□ -2.15
SLC1A1P43005 SNORD56.1-201ENST00000362913 68 ntBASIC1.64□□□□□ -2.15
SLC1A1P43005 RNU6-61P-201ENST00000365528 109 ntBASIC1.64□□□□□ -2.15
SLC1A1P43005 MIR29C-201ENST00000385231 88 ntBASIC1.64□□□□□ -2.15
SLC1A1P43005 MTND2P29-201ENST00000438595 412 ntBASIC1.64□□□□□ -2.15
SLC1A1P43005 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC1.64□□□□□ -2.15
SLC1A1P43005 AC010095.1-201ENST00000443543 144 ntBASIC1.64□□□□□ -2.15
SLC1A1P43005 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.64□□□□□ -2.15
SLC1A1P43005 EPS15P1-201ENST00000448836 336 ntBASIC1.64□□□□□ -2.15
SLC1A1P43005 USP9YP12-201ENST00000450481 570 ntBASIC1.64□□□□□ -2.15
SLC1A1P43005 snoU13.14-201ENST00000459372 104 ntBASIC1.64□□□□□ -2.15
SLC1A1P43005 snoU13.15-201ENST00000459407 104 ntBASIC1.64□□□□□ -2.15
SLC1A1P43005 RNU6-965P-201ENST00000516721 96 ntBASIC1.64□□□□□ -2.15
SLC1A1P43005 RN7SKP256-201ENST00000517201 314 ntBASIC1.64□□□□□ -2.15
SLC1A1P43005 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC1.64□□□□□ -2.15
SLC1A1P43005 AC022616.8-201ENST00000533569 253 ntBASIC1.64□□□□□ -2.15
SLC1A1P43005 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC1.64□□□□□ -2.15
SLC1A1P43005 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.64□□□□□ -2.15
SLC1A1P43005 MIR3683-201ENST00000580847 82 ntBASIC1.64□□□□□ -2.15
SLC1A1P43005 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.64□□□□□ -2.15
SLC1A1P43005 AC012065.4-201ENST00000602445 679 ntBASIC1.64□□□□□ -2.15
SLC1A1P43005 AC011458.1-201ENST00000604034 617 ntBASIC1.64□□□□□ -2.15
SLC1A1P43005 AC027449.1-201ENST00000608890 407 ntBASIC1.64□□□□□ -2.15
SLC1A1P43005 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.64□□□□□ -2.15
SLC1A1P43005 AC019226.2-201ENST00000625973 424 ntBASIC1.64□□□□□ -2.15
SLC1A1P43005 MTND4P23-201ENST00000447723 1363 ntBASIC1.63□□□□□ -2.15
SLC1A1P43005 AL356292.1-201ENST00000283110 373 ntBASIC1.63□□□□□ -2.15
SLC1A1P43005 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SLC1A1P43005 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.63□□□□□ -2.15
SLC1A1P43005 snoU2_19.1-201ENST00000362361 80 ntBASIC1.63□□□□□ -2.15
SLC1A1P43005 RNU6-371P-201ENST00000364283 108 ntBASIC1.63□□□□□ -2.15
SLC1A1P43005 SNORD14D-201ENST00000384390 87 ntBASIC1.63□□□□□ -2.15
SLC1A1P43005 RNA5SP465-201ENST00000391195 109 ntBASIC1.63□□□□□ -2.15
SLC1A1P43005 SNORA26.9-201ENST00000391322 122 ntBASIC1.63□□□□□ -2.15
SLC1A1P43005 RPL23AP32-201ENST00000395315 459 ntBASIC1.63□□□□□ -2.15
SLC1A1P43005 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC1.63□□□□□ -2.15
SLC1A1P43005 RPL21P90-201ENST00000415692 466 ntBASIC1.63□□□□□ -2.15
SLC1A1P43005 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC1.63□□□□□ -2.15
SLC1A1P43005 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.63□□□□□ -2.15
SLC1A1P43005 MTCYBP5-201ENST00000423752 1135 ntBASIC1.63□□□□□ -2.15
SLC1A1P43005 TOMM20P4-201ENST00000427861 435 ntBASIC1.63□□□□□ -2.15
SLC1A1P43005 HMGN2P3-201ENST00000433603 273 ntBASIC1.63□□□□□ -2.15
SLC1A1P43005 HMGN2P5-201ENST00000436882 273 ntBASIC1.63□□□□□ -2.15
SLC1A1P43005 AL353752.1-201ENST00000454946 260 ntBASIC1.63□□□□□ -2.15
SLC1A1P43005 RPL30P12-201ENST00000474666 353 ntBASIC1.63□□□□□ -2.15
SLC1A1P43005 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.63□□□□□ -2.15
SLC1A1P43005 Y_RNA.672-201ENST00000516289 104 ntBASIC1.63□□□□□ -2.15
SLC1A1P43005 SNORA25.15-201ENST00000516487 89 ntBASIC1.63□□□□□ -2.15
SLC1A1P43005 RNU6-1220P-201ENST00000517126 108 ntBASIC1.63□□□□□ -2.15
SLC1A1P43005 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.63□□□□□ -2.15
SLC1A1P43005 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.63□□□□□ -2.15
SLC1A1P43005 AC022616.3-201ENST00000523940 148 ntBASIC1.63□□□□□ -2.15
SLC1A1P43005 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.63□□□□□ -2.15
SLC1A1P43005 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.63□□□□□ -2.15
SLC1A1P43005 AC078795.2-201ENST00000602835 1252 ntBASIC1.63□□□□□ -2.15
SLC1A1P43005 AL451064.1-201ENST00000607718 471 ntBASIC1.63□□□□□ -2.15
SLC1A1P43005 AL136370.1-201ENST00000608166 691 ntBASIC1.63□□□□□ -2.15
SLC1A1P43005 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.63□□□□□ -2.15
SLC1A1P43005 AC091834.1-201ENST00000614543 472 ntBASIC1.63□□□□□ -2.15
SLC1A1P43005 AC026585.1-201ENST00000619582 524 ntBASIC1.63□□□□□ -2.15
SLC1A1P43005 AC007792.1-201ENST00000623023 402 ntBASIC1.63□□□□□ -2.15
SLC1A1P43005 AC002543.1-201ENST00000299783 1954 ntBASIC1.63□□□□□ -2.15
SLC1A1P43005 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.62□□□□□ -2.15
SLC1A1P43005 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
SLC1A1P43005 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.62□□□□□ -2.15
SLC1A1P43005 MIR29B2-201ENST00000385055 81 ntBASIC1.62□□□□□ -2.15
SLC1A1P43005 RN7SKP284-201ENST00000411002 343 ntBASIC1.62□□□□□ -2.15
SLC1A1P43005 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.62□□□□□ -2.15
SLC1A1P43005 C1DP2-201ENST00000418167 426 ntBASIC1.62□□□□□ -2.15
SLC1A1P43005 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.62□□□□□ -2.15
SLC1A1P43005 AC011233.1-201ENST00000422812 283 ntBASIC1.62□□□□□ -2.15
SLC1A1P43005 USP9YP18-201ENST00000425912 695 ntBASIC1.62□□□□□ -2.15
SLC1A1P43005 CALM2P2-201ENST00000428512 440 ntBASIC1.62□□□□□ -2.15
SLC1A1P43005 AL121890.1-201ENST00000435457 205 ntBASIC1.62□□□□□ -2.15
SLC1A1P43005 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC1.62□□□□□ -2.15
SLC1A1P43005 AC007677.1-201ENST00000445757 515 ntBASIC1.62□□□□□ -2.15
SLC1A1P43005 AC245102.2-201ENST00000448956 180 ntBASIC1.62□□□□□ -2.15
SLC1A1P43005 AMD1P1-201ENST00000457220 922 ntBASIC1.62□□□□□ -2.15
SLC1A1P43005 MTCO3P9-201ENST00000506989 781 ntBASIC1.62□□□□□ -2.15
SLC1A1P43005 PTP4A1P4-201ENST00000512479 322 ntBASIC1.62□□□□□ -2.15
SLC1A1P43005 AC117532.1-201ENST00000514638 323 ntBASIC1.62□□□□□ -2.15
SLC1A1P43005 AC022878.1-201ENST00000530684 149 ntBASIC1.62□□□□□ -2.15
SLC1A1P43005 MIR4298-201ENST00000584380 73 ntBASIC1.62□□□□□ -2.15
SLC1A1P43005 AC011494.1-201ENST00000596454 237 ntBASIC1.62□□□□□ -2.15
SLC1A1P43005 BX248123.2-201ENST00000606318 124 ntBASIC1.62□□□□□ -2.15
SLC1A1P43005 AC068787.1-201ENST00000623908 691 ntBASIC1.62□□□□□ -2.15
SLC1A1P43005 AL359740.1-201ENST00000624340 592 ntBASIC1.62□□□□□ -2.15
SLC1A1P43005 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.62□□□□□ -2.15
SLC1A1P43005 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
SLC1A1P43005 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
SLC1A1P43005 RNU6-743P-201ENST00000364151 106 ntBASIC1.61□□□□□ -2.15
SLC1A1P43005 RNU11-3P-201ENST00000391111 133 ntBASIC1.61□□□□□ -2.15
SLC1A1P43005 AC000111.3-201ENST00000433478 193 ntBASIC1.61□□□□□ -2.15
SLC1A1P43005 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms