Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.13□□□□□ -2.39
SNCAP37840 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.12□□□□□ -2.39
SNCAP37840 Y_RNA.224-201ENST00000364308 111 ntBASIC0.12□□□□□ -2.39
SNCAP37840 MIR499A-201ENST00000384903 122 ntBASIC0.12□□□□□ -2.39
SNCAP37840 RNU6-910P-201ENST00000390844 107 ntBASIC0.12□□□□□ -2.39
SNCAP37840 AC104651.1-201ENST00000427559 735 ntBASIC0.12□□□□□ -2.39
SNCAP37840 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.12□□□□□ -2.39
SNCAP37840 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.12□□□□□ -2.39
SNCAP37840 GPM6BP2-201ENST00000432046 144 ntBASIC0.12□□□□□ -2.39
SNCAP37840 MTCO3P18-201ENST00000440206 761 ntBASIC0.12□□□□□ -2.39
SNCAP37840 GPM6BP1-201ENST00000446387 144 ntBASIC0.12□□□□□ -2.39
SNCAP37840 AC023194.1-201ENST00000493084 308 ntBASIC0.12□□□□□ -2.39
SNCAP37840 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC0.12□□□□□ -2.39
SNCAP37840 MTCO3P7-201ENST00000510008 774 ntBASIC0.12□□□□□ -2.39
SNCAP37840 RNU5A-4P-201ENST00000516588 111 ntBASIC0.12□□□□□ -2.39
SNCAP37840 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.12□□□□□ -2.39
SNCAP37840 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.12□□□□□ -2.39
SNCAP37840 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC0.12□□□□□ -2.39
SNCAP37840 AC090578.1-201ENST00000604955 591 ntBASIC0.12□□□□□ -2.39
SNCAP37840 AC006270.3-201ENST00000605967 1036 ntBASIC0.12□□□□□ -2.39
SNCAP37840 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.12□□□□□ -2.39
SNCAP37840 AC017083.3-201ENST00000609955 700 ntBASIC0.12□□□□□ -2.39
SNCAP37840 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.12□□□□□ -2.39
SNCAP37840 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.12□□□□□ -2.39
SNCAP37840 MIR1248-201ENST00000629190 106 ntBASIC0.12□□□□□ -2.39
SNCAP37840 RNU6-743P-201ENST00000364151 106 ntBASIC0.11□□□□□ -2.39
SNCAP37840 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.11□□□□□ -2.39
SNCAP37840 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
SNCAP37840 RNU6-1300P-201ENST00000391046 108 ntBASIC0.11□□□□□ -2.39
SNCAP37840 TMSB4XP8-201ENST00000402089 135 ntBASIC0.11□□□□□ -2.39
SNCAP37840 TMSB4XP6-201ENST00000415187 135 ntBASIC0.11□□□□□ -2.39
SNCAP37840 MTATP6P27-201ENST00000416987 621 ntBASIC0.11□□□□□ -2.39
SNCAP37840 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
SNCAP37840 TMSB4XP1-201ENST00000424567 135 ntBASIC0.11□□□□□ -2.39
SNCAP37840 RAB28P5-201ENST00000427490 651 ntBASIC0.11□□□□□ -2.39
SNCAP37840 MTND2P21-201ENST00000436242 1042 ntBASIC0.11□□□□□ -2.39
SNCAP37840 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC0.11□□□□□ -2.39
SNCAP37840 RPS20P10-201ENST00000451209 253 ntBASIC0.11□□□□□ -2.39
SNCAP37840 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC0.11□□□□□ -2.39
SNCAP37840 MTND5P13-201ENST00000513046 1079 ntBASIC0.11□□□□□ -2.39
SNCAP37840 SNORD79.1-201ENST00000516069 84 ntBASIC0.11□□□□□ -2.39
SNCAP37840 RNA5SP220-201ENST00000516298 104 ntBASIC0.11□□□□□ -2.39
SNCAP37840 RNU6-885P-201ENST00000516607 104 ntBASIC0.11□□□□□ -2.39
SNCAP37840 RNU6-405P-201ENST00000516637 110 ntBASIC0.11□□□□□ -2.39
SNCAP37840 RNU6-467P-201ENST00000517027 110 ntBASIC0.11□□□□□ -2.39
SNCAP37840 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.11□□□□□ -2.39
SNCAP37840 HMGB1P33-201ENST00000563485 527 ntBASIC0.11□□□□□ -2.39
SNCAP37840 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC0.11□□□□□ -2.39
SNCAP37840 BNIP3P31-201ENST00000604515 566 ntBASIC0.11□□□□□ -2.39
SNCAP37840 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC0.11□□□□□ -2.39
SNCAP37840 AC123767.1-202ENST00000620407 817 ntBASIC0.11□□□□□ -2.39
SNCAP37840 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
SNCAP37840 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC0.1□□□□□ -2.39
SNCAP37840 RNA5SP299-201ENST00000391203 116 ntBASIC0.1□□□□□ -2.39
SNCAP37840 RNU2-28P-201ENST00000410457 189 ntBASIC0.1□□□□□ -2.39
SNCAP37840 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.1□□□□□ -2.39
SNCAP37840 BTF3L4P3-201ENST00000418879 476 ntBASIC0.1□□□□□ -2.39
SNCAP37840 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC0.1□□□□□ -2.39
SNCAP37840 AC092170.1-201ENST00000440211 356 ntBASIC0.1□□□□□ -2.39
SNCAP37840 VN1R10P-201ENST00000447106 875 ntBASIC0.1□□□□□ -2.39
SNCAP37840 RNU6-333P-201ENST00000459117 107 ntBASIC0.1□□□□□ -2.39
SNCAP37840 AC108740.1-201ENST00000498629 225 ntBASIC0.1□□□□□ -2.39
SNCAP37840 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.1□□□□□ -2.39
SNCAP37840 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.1□□□□□ -2.39
SNCAP37840 AC136618.2-201ENST00000575091 400 ntBASIC0.1□□□□□ -2.39
SNCAP37840 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC0.1□□□□□ -2.39
SNCAP37840 Z69720.2-201ENST00000624755 279 ntBASIC0.1□□□□□ -2.39
SNCAP37840 LINC02555-201ENST00000563933 1951 ntBASIC0.1□□□□□ -2.39
SNCAP37840 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
SNCAP37840 AC090625.1-201ENST00000357130 210 ntBASIC0.09□□□□□ -2.4
SNCAP37840 RNU6-349P-201ENST00000362402 107 ntBASIC0.09□□□□□ -2.4
SNCAP37840 SNORA63D-201ENST00000364359 132 ntBASIC0.09□□□□□ -2.4
SNCAP37840 RNU6-1237P-201ENST00000384777 107 ntBASIC0.09□□□□□ -2.4
SNCAP37840 MIR942-201ENST00000401111 86 ntBASIC0.09□□□□□ -2.4
SNCAP37840 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
SNCAP37840 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.09□□□□□ -2.4
SNCAP37840 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC0.09□□□□□ -2.4
SNCAP37840 AC092423.1-201ENST00000430165 186 ntBASIC0.09□□□□□ -2.4
SNCAP37840 BRK1P2-201ENST00000442875 223 ntBASIC0.09□□□□□ -2.4
SNCAP37840 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC0.09□□□□□ -2.4
SNCAP37840 RNU6-1132P-201ENST00000459214 107 ntBASIC0.09□□□□□ -2.4
SNCAP37840 AC097473.1-201ENST00000508142 408 ntBASIC0.09□□□□□ -2.4
SNCAP37840 SNORA31.2-201ENST00000516019 134 ntBASIC0.09□□□□□ -2.4
SNCAP37840 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.09□□□□□ -2.4
SNCAP37840 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC0.09□□□□□ -2.4
SNCAP37840 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.09□□□□□ -2.4
SNCAP37840 AC068790.6-201ENST00000602558 258 ntBASIC0.09□□□□□ -2.4
SNCAP37840 Z83818.1-201ENST00000603584 150 ntBASIC0.09□□□□□ -2.4
SNCAP37840 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
SNCAP37840 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC0.09□□□□□ -2.4
SNCAP37840 AL138726.1-201ENST00000614873 333 ntBASIC0.09□□□□□ -2.4
SNCAP37840 AC090617.9-201ENST00000623751 147 ntBASIC0.09□□□□□ -2.4
SNCAP37840 AC120349.3-201ENST00000624377 529 ntBASIC0.09□□□□□ -2.4
SNCAP37840 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.09□□□□□ -2.4
SNCAP37840 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC0.08□□□□□ -2.4
SNCAP37840 RNU6-188P-201ENST00000364207 107 ntBASIC0.08□□□□□ -2.4
SNCAP37840 MIR29B2-201ENST00000385055 81 ntBASIC0.08□□□□□ -2.4
SNCAP37840 RNA5SP193-201ENST00000410353 107 ntBASIC0.08□□□□□ -2.4
SNCAP37840 RNU6-1054P-201ENST00000411293 104 ntBASIC0.08□□□□□ -2.4
SNCAP37840 AL035398.1-201ENST00000430869 322 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 128.3 ms