Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.31□□□□□ -2.2
RPA3P35244 AC063943.3-201ENST00000615562 356 ntBASIC1.31□□□□□ -2.2
RPA3P35244 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.31□□□□□ -2.2
RPA3P35244 MIR1248-201ENST00000629190 106 ntBASIC1.31□□□□□ -2.2
RPA3P35244 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
RPA3P35244 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
RPA3P35244 RNY4P24-201ENST00000362735 96 ntBASIC1.3□□□□□ -2.2
RPA3P35244 MIR29B2-201ENST00000385055 81 ntBASIC1.3□□□□□ -2.2
RPA3P35244 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.3□□□□□ -2.2
RPA3P35244 BTF3P4-201ENST00000418852 495 ntBASIC1.3□□□□□ -2.2
RPA3P35244 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.3□□□□□ -2.2
RPA3P35244 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.3□□□□□ -2.2
RPA3P35244 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.3□□□□□ -2.2
RPA3P35244 RNU6-237P-201ENST00000515985 71 ntBASIC1.3□□□□□ -2.2
RPA3P35244 Y_RNA.687-201ENST00000516558 91 ntBASIC1.3□□□□□ -2.2
RPA3P35244 RNU6-1003P-201ENST00000517099 105 ntBASIC1.3□□□□□ -2.2
RPA3P35244 AC090821.2-201ENST00000523552 176 ntBASIC1.3□□□□□ -2.2
RPA3P35244 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.3□□□□□ -2.2
RPA3P35244 MIR4421-201ENST00000578133 69 ntBASIC1.3□□□□□ -2.2
RPA3P35244 AC144521.1-201ENST00000607148 956 ntBASIC1.3□□□□□ -2.2
RPA3P35244 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC1.3□□□□□ -2.2
RPA3P35244 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
RPA3P35244 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
RPA3P35244 SNORA7.1-201ENST00000363750 139 ntBASIC1.29□□□□□ -2.2
RPA3P35244 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
RPA3P35244 RNA5SP390-201ENST00000410191 113 ntBASIC1.29□□□□□ -2.2
RPA3P35244 Y_RNA.597-201ENST00000410463 100 ntBASIC1.29□□□□□ -2.2
RPA3P35244 AL353777.1-201ENST00000425552 326 ntBASIC1.29□□□□□ -2.2
RPA3P35244 NDUFB1P2-201ENST00000449477 176 ntBASIC1.29□□□□□ -2.2
RPA3P35244 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.29□□□□□ -2.2
RPA3P35244 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC1.29□□□□□ -2.2
RPA3P35244 RPL30P12-201ENST00000474666 353 ntBASIC1.29□□□□□ -2.2
RPA3P35244 AC114801.2-201ENST00000503825 781 ntBASIC1.29□□□□□ -2.2
RPA3P35244 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC1.29□□□□□ -2.2
RPA3P35244 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.29□□□□□ -2.2
RPA3P35244 RNU6-201P-201ENST00000517100 61 ntBASIC1.29□□□□□ -2.2
RPA3P35244 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.29□□□□□ -2.2
RPA3P35244 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.29□□□□□ -2.2
RPA3P35244 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.29□□□□□ -2.2
RPA3P35244 MIR3124-201ENST00000582636 67 ntBASIC1.29□□□□□ -2.2
RPA3P35244 AL138889.2-201ENST00000603883 242 ntBASIC1.29□□□□□ -2.2
RPA3P35244 AL158032.1-201ENST00000605401 106 ntBASIC1.29□□□□□ -2.2
RPA3P35244 AL139022.2-201ENST00000606934 443 ntBASIC1.29□□□□□ -2.2
RPA3P35244 AP002782.1-201ENST00000623107 614 ntBASIC1.29□□□□□ -2.2
RPA3P35244 AC103706.2-201ENST00000638080 240 ntBASIC1.29□□□□□ -2.2
RPA3P35244 AL445523.1-201ENST00000451184 1362 ntBASIC1.29□□□□□ -2.2
RPA3P35244 ZNF680P1-201ENST00000436625 1469 ntBASIC1.29□□□□□ -2.2
RPA3P35244 Y_RNA.99-201ENST00000363138 105 ntBASIC1.28□□□□□ -2.2
RPA3P35244 RNU6-636P-201ENST00000384598 107 ntBASIC1.28□□□□□ -2.2
RPA3P35244 RPS15AP12-201ENST00000419498 388 ntBASIC1.28□□□□□ -2.2
RPA3P35244 MTCYBP5-201ENST00000423752 1135 ntBASIC1.28□□□□□ -2.2
RPA3P35244 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.28□□□□□ -2.2
RPA3P35244 RPS15AP10-201ENST00000432472 382 ntBASIC1.28□□□□□ -2.2
RPA3P35244 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.28□□□□□ -2.2
RPA3P35244 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC1.28□□□□□ -2.2
RPA3P35244 RNU1-123P-201ENST00000458950 160 ntBASIC1.28□□□□□ -2.2
RPA3P35244 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.28□□□□□ -2.2
RPA3P35244 SNORA43.2-201ENST00000516652 128 ntBASIC1.28□□□□□ -2.2
RPA3P35244 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.28□□□□□ -2.2
RPA3P35244 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.28□□□□□ -2.2
RPA3P35244 BNIP3P6-201ENST00000549284 499 ntBASIC1.28□□□□□ -2.2
RPA3P35244 BNIP3P40-201ENST00000596017 556 ntBASIC1.28□□□□□ -2.2
RPA3P35244 AL139418.1-201ENST00000613613 177 ntBASIC1.28□□□□□ -2.2
RPA3P35244 AC091812.1-201ENST00000432235 1948 ntBASIC1.28□□□□□ -2.2
RPA3P35244 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
RPA3P35244 CBX3P1-201ENST00000325243 554 ntBASIC1.27□□□□□ -2.21
RPA3P35244 SNORD56.1-201ENST00000362913 68 ntBASIC1.27□□□□□ -2.21
RPA3P35244 RNU6-23P-201ENST00000363283 107 ntBASIC1.27□□□□□ -2.21
RPA3P35244 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
RPA3P35244 AP1B1P2-201ENST00000416196 106 ntBASIC1.27□□□□□ -2.21
RPA3P35244 AC006366.1-201ENST00000422002 759 ntBASIC1.27□□□□□ -2.21
RPA3P35244 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC1.27□□□□□ -2.21
RPA3P35244 MTND5P25-201ENST00000430499 799 ntBASIC1.27□□□□□ -2.21
RPA3P35244 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC1.27□□□□□ -2.21
RPA3P35244 AL031313.1-201ENST00000448435 256 ntBASIC1.27□□□□□ -2.21
RPA3P35244 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.27□□□□□ -2.21
RPA3P35244 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.27□□□□□ -2.21
RPA3P35244 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC1.27□□□□□ -2.21
RPA3P35244 HSPE1P23-201ENST00000509838 286 ntBASIC1.27□□□□□ -2.21
RPA3P35244 AC009646.1-201ENST00000510455 318 ntBASIC1.27□□□□□ -2.21
RPA3P35244 SNORA31.17-201ENST00000516953 127 ntBASIC1.27□□□□□ -2.21
RPA3P35244 AC105185.1-201ENST00000518705 535 ntBASIC1.27□□□□□ -2.21
RPA3P35244 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC1.27□□□□□ -2.21
RPA3P35244 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.27□□□□□ -2.21
RPA3P35244 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC1.27□□□□□ -2.21
RPA3P35244 MIR3118-1-201ENST00000581787 76 ntBASIC1.27□□□□□ -2.21
RPA3P35244 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.27□□□□□ -2.21
RPA3P35244 AC121334.2-201ENST00000605387 271 ntBASIC1.27□□□□□ -2.21
RPA3P35244 AL050343.2-201ENST00000607338 280 ntBASIC1.27□□□□□ -2.21
RPA3P35244 AL157392.4-201ENST00000609756 345 ntBASIC1.27□□□□□ -2.21
RPA3P35244 AL359547.2-201ENST00000615810 418 ntBASIC1.27□□□□□ -2.21
RPA3P35244 U6.42-201ENST00000618440 107 ntBASIC1.27□□□□□ -2.21
RPA3P35244 AC007792.1-201ENST00000623023 402 ntBASIC1.27□□□□□ -2.21
RPA3P35244 SCARNA4-202ENST00000625402 129 ntBASIC1.27□□□□□ -2.21
RPA3P35244 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.27□□□□□ -2.21
RPA3P35244 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.26□□□□□ -2.21
RPA3P35244 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
RPA3P35244 OR4G2P-201ENST00000328113 903 ntBASIC1.26□□□□□ -2.21
RPA3P35244 RNA5SP493-201ENST00000364115 91 ntBASIC1.26□□□□□ -2.21
RPA3P35244 RNU6-384P-201ENST00000364900 104 ntBASIC1.26□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms