Protein–RNA interactions for Protein: P31260

HOXA10, Homeobox protein Hox-A10, humanhuman

Predicted RBP Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA10P31260 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HOXA10P31260 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HOXA10P31260 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HOXA10P31260 RNU6-215P-201ENST00000365169 102 ntBASIC4.42□□□□□ -1.7
HOXA10P31260 Y_RNA.343-201ENST00000365354 112 ntBASIC4.42□□□□□ -1.7
HOXA10P31260 SNORD78.2-201ENST00000391076 69 ntBASIC4.42□□□□□ -1.7
HOXA10P31260 RN7SKP111-201ENST00000410349 271 ntBASIC4.42□□□□□ -1.7
HOXA10P31260 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.42□□□□□ -1.7
HOXA10P31260 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.42□□□□□ -1.7
HOXA10P31260 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC4.42□□□□□ -1.7
HOXA10P31260 USP9YP7-201ENST00000436723 430 ntBASIC4.42□□□□□ -1.7
HOXA10P31260 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.42□□□□□ -1.7
HOXA10P31260 USP9YP32-201ENST00000452432 430 ntBASIC4.42□□□□□ -1.7
HOXA10P31260 Y_RNA.638-201ENST00000459374 113 ntBASIC4.42□□□□□ -1.7
HOXA10P31260 TRBV12-2-201ENST00000489763 344 ntBASIC4.42□□□□□ -1.7
HOXA10P31260 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC4.42□□□□□ -1.7
HOXA10P31260 RNU2-31P-201ENST00000516954 155 ntBASIC4.42□□□□□ -1.7
HOXA10P31260 AC022790.1-201ENST00000522872 204 ntBASIC4.42□□□□□ -1.7
HOXA10P31260 CASP1P1-201ENST00000526345 212 ntBASIC4.42□□□□□ -1.7
HOXA10P31260 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.42□□□□□ -1.7
HOXA10P31260 OR4H12P-201ENST00000556269 907 ntBASIC4.42□□□□□ -1.7
HOXA10P31260 AC023824.2-201ENST00000566185 400 ntBASIC4.42□□□□□ -1.7
HOXA10P31260 AC009314.1-201ENST00000603871 304 ntBASIC4.42□□□□□ -1.7
HOXA10P31260 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
HOXA10P31260 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HOXA10P31260 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
HOXA10P31260 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.42□□□□□ -1.7
HOXA10P31260 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXA10P31260 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXA10P31260 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXA10P31260 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXA10P31260 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HOXA10P31260 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HOXA10P31260 USP8P1-201ENST00000494673 3183 ntBASIC4.41□□□□□ -1.7
HOXA10P31260 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC4.41□□□□□ -1.7
HOXA10P31260 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
HOXA10P31260 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXA10P31260 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HOXA10P31260 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.41□□□□□ -1.7
HOXA10P31260 SNORA38.1-201ENST00000364172 131 ntBASIC4.41□□□□□ -1.7
HOXA10P31260 Y_RNA.275-201ENST00000364726 110 ntBASIC4.41□□□□□ -1.7
HOXA10P31260 SNORD20-201ENST00000384550 80 ntBASIC4.41□□□□□ -1.7
HOXA10P31260 Y_RNA.568-201ENST00000384742 113 ntBASIC4.41□□□□□ -1.7
HOXA10P31260 MIR128-1-201ENST00000384921 82 ntBASIC4.41□□□□□ -1.7
HOXA10P31260 Y_RNA.590-201ENST00000410140 107 ntBASIC4.41□□□□□ -1.7
HOXA10P31260 RNU2-61P-201ENST00000411069 191 ntBASIC4.41□□□□□ -1.7
HOXA10P31260 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.41□□□□□ -1.7
HOXA10P31260 HMGB1P27-201ENST00000431429 603 ntBASIC4.41□□□□□ -1.7
HOXA10P31260 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC4.41□□□□□ -1.7
HOXA10P31260 ANXA2P1-201ENST00000505539 926 ntBASIC4.41□□□□□ -1.7
HOXA10P31260 RNU1-86P-201ENST00000516108 154 ntBASIC4.41□□□□□ -1.7
HOXA10P31260 RNU1-107P-201ENST00000516617 154 ntBASIC4.41□□□□□ -1.7
HOXA10P31260 RNA5SP309-201ENST00000516670 106 ntBASIC4.41□□□□□ -1.7
HOXA10P31260 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXA10P31260 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
HOXA10P31260 MIR4659A-201ENST00000580269 81 ntBASIC4.41□□□□□ -1.7
HOXA10P31260 AL365222.1-201ENST00000614661 98 ntBASIC4.41□□□□□ -1.7
HOXA10P31260 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXA10P31260 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
HOXA10P31260 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.41□□□□□ -1.7
HOXA10P31260 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
HOXA10P31260 RBBP8P1-201ENST00000449447 1844 ntBASIC4.4□□□□□ -1.7
HOXA10P31260 RNA5SP52-201ENST00000362448 134 ntBASIC4.4□□□□□ -1.71
HOXA10P31260 Y_RNA.405-201ENST00000383979 100 ntBASIC4.4□□□□□ -1.71
HOXA10P31260 Y_RNA.451-201ENST00000384200 100 ntBASIC4.4□□□□□ -1.71
HOXA10P31260 Y_RNA.524-201ENST00000384564 100 ntBASIC4.4□□□□□ -1.71
HOXA10P31260 Y_RNA.561-201ENST00000384694 100 ntBASIC4.4□□□□□ -1.71
HOXA10P31260 RNU6-651P-201ENST00000411040 105 ntBASIC4.4□□□□□ -1.71
HOXA10P31260 Y_RNA.623-201ENST00000411128 95 ntBASIC4.4□□□□□ -1.71
HOXA10P31260 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXA10P31260 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXA10P31260 PPP1R11P2-201ENST00000423543 382 ntBASIC4.4□□□□□ -1.71
HOXA10P31260 NDUFB1P1-201ENST00000435191 180 ntBASIC4.4□□□□□ -1.71
HOXA10P31260 AC090774.1-201ENST00000435925 246 ntBASIC4.4□□□□□ -1.71
HOXA10P31260 ANP32BP2-201ENST00000454525 545 ntBASIC4.4□□□□□ -1.71
HOXA10P31260 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXA10P31260 RNU6-1219P-201ENST00000516143 112 ntBASIC4.4□□□□□ -1.71
HOXA10P31260 MIR892C-201ENST00000516410 77 ntBASIC4.4□□□□□ -1.71
HOXA10P31260 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXA10P31260 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.4□□□□□ -1.71
HOXA10P31260 AC110741.2-201ENST00000605278 268 ntBASIC4.4□□□□□ -1.71
HOXA10P31260 AC037487.3-201ENST00000606668 112 ntBASIC4.4□□□□□ -1.71
HOXA10P31260 SNORD113-5-201ENST00000607261 78 ntBASIC4.4□□□□□ -1.71
HOXA10P31260 AL450472.3-201ENST00000615578 367 ntBASIC4.4□□□□□ -1.71
HOXA10P31260 MIR4727-201ENST00000622232 55 ntBASIC4.4□□□□□ -1.71
HOXA10P31260 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.4□□□□□ -1.71
HOXA10P31260 ZNF826P-207ENST00000622273 1910 ntBASIC4.4□□□□□ -1.71
HOXA10P31260 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HOXA10P31260 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA10P31260 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HOXA10P31260 RNU6-1179P-201ENST00000384667 107 ntBASIC4.39□□□□□ -1.71
HOXA10P31260 MIR135A2-201ENST00000384854 100 ntBASIC4.39□□□□□ -1.71
HOXA10P31260 RNU6-821P-201ENST00000390995 107 ntBASIC4.39□□□□□ -1.71
HOXA10P31260 RNU6-131P-201ENST00000391144 107 ntBASIC4.39□□□□□ -1.71
HOXA10P31260 AC092447.6-201ENST00000414578 210 ntBASIC4.39□□□□□ -1.71
HOXA10P31260 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC4.39□□□□□ -1.71
HOXA10P31260 ELOCP18-201ENST00000434209 337 ntBASIC4.39□□□□□ -1.71
HOXA10P31260 AL162725.1-201ENST00000435405 301 ntBASIC4.39□□□□□ -1.71
HOXA10P31260 HIGD1AP2-201ENST00000446367 280 ntBASIC4.39□□□□□ -1.71
HOXA10P31260 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms