Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 COX6CP10-201ENST00000416832 224 ntBASIC4.6□□□□□ -1.67
RXRBP28702 AC003685.2-201ENST00000422795 395 ntBASIC4.6□□□□□ -1.67
RXRBP28702 AL513043.1-201ENST00000439124 535 ntBASIC4.6□□□□□ -1.67
RXRBP28702 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.6□□□□□ -1.67
RXRBP28702 RNU6-1037P-201ENST00000459571 107 ntBASIC4.6□□□□□ -1.67
RXRBP28702 RPL9P9-202ENST00000466501 579 ntBASIC4.6□□□□□ -1.67
RXRBP28702 AC109925.1-201ENST00000478069 331 ntBASIC4.6□□□□□ -1.67
RXRBP28702 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.6□□□□□ -1.67
RXRBP28702 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC4.6□□□□□ -1.67
RXRBP28702 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC4.6□□□□□ -1.67
RXRBP28702 SNORA25.14-201ENST00000516481 132 ntBASIC4.6□□□□□ -1.67
RXRBP28702 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.6□□□□□ -1.67
RXRBP28702 AP002392.1-201ENST00000537692 208 ntBASIC4.6□□□□□ -1.67
RXRBP28702 SYF2P1-201ENST00000550658 413 ntBASIC4.6□□□□□ -1.67
RXRBP28702 AL442163.3-201ENST00000554110 156 ntBASIC4.6□□□□□ -1.67
RXRBP28702 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.6□□□□□ -1.67
RXRBP28702 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.6□□□□□ -1.67
RXRBP28702 AC021753.1-201ENST00000635724 168 ntBASIC4.6□□□□□ -1.67
RXRBP28702 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
RXRBP28702 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RXRBP28702 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RXRBP28702 Y_RNA.199-201ENST00000364014 102 ntBASIC4.59□□□□□ -1.67
RXRBP28702 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.59□□□□□ -1.67
RXRBP28702 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
RXRBP28702 MIR504-201ENST00000385065 83 ntBASIC4.59□□□□□ -1.67
RXRBP28702 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.59□□□□□ -1.67
RXRBP28702 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.59□□□□□ -1.67
RXRBP28702 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC4.59□□□□□ -1.67
RXRBP28702 AP002884.2-201ENST00000471647 395 ntBASIC4.59□□□□□ -1.67
RXRBP28702 NEAT1-202ENST00000501122 22743 ntBASIC4.59□□□□□ -1.67
RXRBP28702 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.59□□□□□ -1.67
RXRBP28702 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.59□□□□□ -1.67
RXRBP28702 SCARNA24.2-201ENST00000516968 130 ntBASIC4.59□□□□□ -1.67
RXRBP28702 RNU4-60P-201ENST00000517239 135 ntBASIC4.59□□□□□ -1.67
RXRBP28702 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.59□□□□□ -1.67
RXRBP28702 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.59□□□□□ -1.67
RXRBP28702 AC010186.2-204ENST00000537668 439 ntBASIC4.59□□□□□ -1.67
RXRBP28702 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
RXRBP28702 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC4.59□□□□□ -1.67
RXRBP28702 U2.14-201ENST00000615943 113 ntBASIC4.59□□□□□ -1.67
RXRBP28702 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
RXRBP28702 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.59□□□□□ -1.68
RXRBP28702 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
RXRBP28702 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
RXRBP28702 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
RXRBP28702 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
RXRBP28702 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.58□□□□□ -1.68
RXRBP28702 Y_RNA.439-201ENST00000384119 94 ntBASIC4.58□□□□□ -1.68
RXRBP28702 RNU6-1179P-201ENST00000384667 107 ntBASIC4.58□□□□□ -1.68
RXRBP28702 RNU6-837P-201ENST00000391056 108 ntBASIC4.58□□□□□ -1.68
RXRBP28702 RPL21P75-201ENST00000396599 483 ntBASIC4.58□□□□□ -1.68
RXRBP28702 RPL21P28-201ENST00000401418 483 ntBASIC4.58□□□□□ -1.68
RXRBP28702 RNU2-43P-201ENST00000410306 190 ntBASIC4.58□□□□□ -1.68
RXRBP28702 RNA5SP306-201ENST00000411087 107 ntBASIC4.58□□□□□ -1.68
RXRBP28702 RNA5SP508-201ENST00000411327 119 ntBASIC4.58□□□□□ -1.68
RXRBP28702 AL096701.2-201ENST00000416920 238 ntBASIC4.58□□□□□ -1.68
RXRBP28702 AL590556.1-201ENST00000423231 483 ntBASIC4.58□□□□□ -1.68
RXRBP28702 AL445305.1-201ENST00000432577 575 ntBASIC4.58□□□□□ -1.68
RXRBP28702 BX679664.1-201ENST00000434429 253 ntBASIC4.58□□□□□ -1.68
RXRBP28702 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.58□□□□□ -1.68
RXRBP28702 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
RXRBP28702 AC079354.2-201ENST00000453523 154 ntBASIC4.58□□□□□ -1.68
RXRBP28702 RPL21P39-201ENST00000463605 483 ntBASIC4.58□□□□□ -1.68
RXRBP28702 AC132942.1-201ENST00000486753 483 ntBASIC4.58□□□□□ -1.68
RXRBP28702 AC093591.1-201ENST00000491435 481 ntBASIC4.58□□□□□ -1.68
RXRBP28702 RPL21P16-201ENST00000495531 483 ntBASIC4.58□□□□□ -1.68
RXRBP28702 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.58□□□□□ -1.68
RXRBP28702 RNU6-861P-201ENST00000516745 106 ntBASIC4.58□□□□□ -1.68
RXRBP28702 MIR548AI-201ENST00000579940 88 ntBASIC4.58□□□□□ -1.68
RXRBP28702 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC4.58□□□□□ -1.68
RXRBP28702 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC4.58□□□□□ -1.68
RXRBP28702 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC4.58□□□□□ -1.68
RXRBP28702 AC009318.2-201ENST00000610917 651 ntBASIC4.58□□□□□ -1.68
RXRBP28702 CENPF-206ENST00000614578 528 ntTSL 5 BASIC4.58□□□□□ -1.68
RXRBP28702 U73479.1-201ENST00000618062 168 ntBASIC4.58□□□□□ -1.68
RXRBP28702 AC243829.7-201ENST00000633081 225 ntBASIC4.58□□□□□ -1.68
RXRBP28702 MIR4275-201ENST00000636486 87 ntBASIC4.58□□□□□ -1.68
RXRBP28702 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.58□□□□□ -1.68
RXRBP28702 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.58□□□□□ -1.68
RXRBP28702 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
RXRBP28702 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
RXRBP28702 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC4.58□□□□□ -1.68
RXRBP28702 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
RXRBP28702 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RXRBP28702 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RXRBP28702 Y_RNA.143-201ENST00000363520 106 ntBASIC4.57□□□□□ -1.68
RXRBP28702 RNU6-384P-201ENST00000364900 104 ntBASIC4.57□□□□□ -1.68
RXRBP28702 RNU6-102P-201ENST00000384485 104 ntBASIC4.57□□□□□ -1.68
RXRBP28702 MIR153-1-201ENST00000384914 90 ntBASIC4.57□□□□□ -1.68
RXRBP28702 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.57□□□□□ -1.68
RXRBP28702 AL451074.5-201ENST00000415894 435 ntBASIC4.57□□□□□ -1.68
RXRBP28702 AC017079.2-201ENST00000416102 485 ntBASIC4.57□□□□□ -1.68
RXRBP28702 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RXRBP28702 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
RXRBP28702 RPS26P15-201ENST00000488067 348 ntBASIC4.57□□□□□ -1.68
RXRBP28702 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC4.57□□□□□ -1.68
RXRBP28702 VWA8P1-201ENST00000510889 176 ntBASIC4.57□□□□□ -1.68
RXRBP28702 SERF1AP1-201ENST00000514575 187 ntBASIC4.57□□□□□ -1.68
RXRBP28702 AC024405.2-202ENST00000532731 184 ntBASIC4.57□□□□□ -1.68
RXRBP28702 TRAV37-201ENST00000553906 342 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms