Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.78□□□□□ -1.8
VAMP1P23763 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC3.78□□□□□ -1.8
VAMP1P23763 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.78□□□□□ -1.8
VAMP1P23763 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.78□□□□□ -1.8
VAMP1P23763 PARP4P3-201ENST00000510265 317 ntBASIC3.78□□□□□ -1.8
VAMP1P23763 AC067942.3-201ENST00000512025 362 ntBASIC3.78□□□□□ -1.8
VAMP1P23763 RNU2-44P-201ENST00000516795 194 ntBASIC3.78□□□□□ -1.8
VAMP1P23763 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.78□□□□□ -1.8
VAMP1P23763 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC3.78□□□□□ -1.8
VAMP1P23763 RPL17P51-201ENST00000605218 238 ntBASIC3.78□□□□□ -1.8
VAMP1P23763 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.78□□□□□ -1.8
VAMP1P23763 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
VAMP1P23763 AC138915.1-201ENST00000565427 1685 ntBASIC3.78□□□□□ -1.81
VAMP1P23763 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
VAMP1P23763 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.77□□□□□ -1.81
VAMP1P23763 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.77□□□□□ -1.81
VAMP1P23763 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VAMP1P23763 Y_RNA.19-201ENST00000362462 99 ntBASIC3.77□□□□□ -1.81
VAMP1P23763 RNU6-770P-201ENST00000363929 105 ntBASIC3.77□□□□□ -1.81
VAMP1P23763 SNORA74A-201ENST00000364089 198 ntBASIC3.77□□□□□ -1.81
VAMP1P23763 RNU6-1026P-201ENST00000384465 108 ntBASIC3.77□□□□□ -1.81
VAMP1P23763 Z98745.1-201ENST00000402553 494 ntBASIC3.77□□□□□ -1.81
VAMP1P23763 MIR1282-201ENST00000408865 101 ntBASIC3.77□□□□□ -1.81
VAMP1P23763 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC3.77□□□□□ -1.81
VAMP1P23763 RN7SL132P-201ENST00000478131 296 ntBASIC3.77□□□□□ -1.81
VAMP1P23763 AC108043.1-201ENST00000512696 574 ntBASIC3.77□□□□□ -1.81
VAMP1P23763 RNU6-1012P-201ENST00000516606 109 ntBASIC3.77□□□□□ -1.81
VAMP1P23763 AL161670.1-201ENST00000554348 137 ntBASIC3.77□□□□□ -1.81
VAMP1P23763 AC023824.2-201ENST00000566185 400 ntBASIC3.77□□□□□ -1.81
VAMP1P23763 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.77□□□□□ -1.81
VAMP1P23763 MIR3616-201ENST00000584070 92 ntBASIC3.77□□□□□ -1.81
VAMP1P23763 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.77□□□□□ -1.81
VAMP1P23763 AL049767.1-202ENST00000637826 242 ntBASIC3.77□□□□□ -1.81
VAMP1P23763 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VAMP1P23763 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VAMP1P23763 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VAMP1P23763 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VAMP1P23763 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VAMP1P23763 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
VAMP1P23763 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VAMP1P23763 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.76□□□□□ -1.81
VAMP1P23763 MAPK10-253ENST00000641010 4072 ntBASIC3.76□□□□□ -1.81
VAMP1P23763 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.76□□□□□ -1.81
VAMP1P23763 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VAMP1P23763 RNU1-62P-201ENST00000362599 164 ntBASIC3.76□□□□□ -1.81
VAMP1P23763 Y_RNA.183-201ENST00000363882 113 ntBASIC3.76□□□□□ -1.81
VAMP1P23763 Y_RNA.276-201ENST00000364732 109 ntBASIC3.76□□□□□ -1.81
VAMP1P23763 MIR329-1-201ENST00000385028 80 ntBASIC3.76□□□□□ -1.81
VAMP1P23763 RHEBP3-201ENST00000411920 351 ntBASIC3.76□□□□□ -1.81
VAMP1P23763 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC3.76□□□□□ -1.81
VAMP1P23763 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.76□□□□□ -1.81
VAMP1P23763 RBMY1KP-201ENST00000423480 476 ntBASIC3.76□□□□□ -1.81
VAMP1P23763 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC3.76□□□□□ -1.81
VAMP1P23763 COX6B1P7-201ENST00000430845 235 ntBASIC3.76□□□□□ -1.81
VAMP1P23763 BX679664.1-201ENST00000434429 253 ntBASIC3.76□□□□□ -1.81
VAMP1P23763 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.76□□□□□ -1.81
VAMP1P23763 PCNPP5-201ENST00000452246 481 ntBASIC3.76□□□□□ -1.81
VAMP1P23763 AC080013.2-201ENST00000460866 323 ntBASIC3.76□□□□□ -1.81
VAMP1P23763 AC090515.1-201ENST00000465295 476 ntBASIC3.76□□□□□ -1.81
VAMP1P23763 RPS23P5-201ENST00000495419 428 ntBASIC3.76□□□□□ -1.81
VAMP1P23763 AC083906.5-201ENST00000503722 328 ntBASIC3.76□□□□□ -1.81
VAMP1P23763 RNA5SP473-201ENST00000516402 125 ntBASIC3.76□□□□□ -1.81
VAMP1P23763 RNU6-107P-201ENST00000516643 102 ntBASIC3.76□□□□□ -1.81
VAMP1P23763 RNU1-117P-201ENST00000517041 158 ntBASIC3.76□□□□□ -1.81
VAMP1P23763 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.76□□□□□ -1.81
VAMP1P23763 MIR3117-201ENST00000584034 78 ntBASIC3.76□□□□□ -1.81
VAMP1P23763 AC011447.4-201ENST00000587562 111 ntBASIC3.76□□□□□ -1.81
VAMP1P23763 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.76□□□□□ -1.81
VAMP1P23763 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VAMP1P23763 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
VAMP1P23763 ZNF962P-201ENST00000443465 3140 ntBASIC3.75□□□□□ -1.81
VAMP1P23763 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VAMP1P23763 SNORA72.2-201ENST00000365028 127 ntBASIC3.75□□□□□ -1.81
VAMP1P23763 RNU6-26P-201ENST00000383985 107 ntBASIC3.75□□□□□ -1.81
VAMP1P23763 RNU6-611P-201ENST00000384276 104 ntBASIC3.75□□□□□ -1.81
VAMP1P23763 RNU6-1274P-201ENST00000384557 107 ntBASIC3.75□□□□□ -1.81
VAMP1P23763 RN7SKP293-201ENST00000411389 296 ntBASIC3.75□□□□□ -1.81
VAMP1P23763 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.75□□□□□ -1.81
VAMP1P23763 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC3.75□□□□□ -1.81
VAMP1P23763 TRIAP1P1-201ENST00000427062 225 ntBASIC3.75□□□□□ -1.81
VAMP1P23763 CBX3P6-201ENST00000430257 527 ntBASIC3.75□□□□□ -1.81
VAMP1P23763 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.75□□□□□ -1.81
VAMP1P23763 AL731563.1-201ENST00000442202 214 ntBASIC3.75□□□□□ -1.81
VAMP1P23763 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.75□□□□□ -1.81
VAMP1P23763 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.75□□□□□ -1.81
VAMP1P23763 AC140172.1-201ENST00000502928 141 ntBASIC3.75□□□□□ -1.81
VAMP1P23763 AC092490.3-201ENST00000545370 572 ntBASIC3.75□□□□□ -1.81
VAMP1P23763 MIR3186-201ENST00000577404 85 ntBASIC3.75□□□□□ -1.81
VAMP1P23763 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.75□□□□□ -1.81
VAMP1P23763 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.75□□□□□ -1.81
VAMP1P23763 AL713866.2-201ENST00000603579 219 ntBASIC3.75□□□□□ -1.81
VAMP1P23763 AL160290.3-201ENST00000604869 165 ntBASIC3.75□□□□□ -1.81
VAMP1P23763 SNORD11B-201ENST00000607707 90 ntBASIC3.75□□□□□ -1.81
VAMP1P23763 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC3.75□□□□□ -1.81
VAMP1P23763 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
VAMP1P23763 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VAMP1P23763 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VAMP1P23763 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VAMP1P23763 AC006971.1-201ENST00000407916 4486 ntBASIC3.75□□□□□ -1.81
VAMP1P23763 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms