Protein–RNA interactions for Protein: P08294

SOD3, Extracellular superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 240 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD3P08294 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.33□□□□□ -2.2
SOD3P08294 RPL22P17-201ENST00000438729 315 ntBASIC1.33□□□□□ -2.2
SOD3P08294 AC004854.1-201ENST00000440356 349 ntBASIC1.33□□□□□ -2.2
SOD3P08294 AC118469.1-201ENST00000442943 488 ntBASIC1.33□□□□□ -2.2
SOD3P08294 AC009474.2-201ENST00000451383 136 ntBASIC1.33□□□□□ -2.2
SOD3P08294 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC1.33□□□□□ -2.2
SOD3P08294 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC1.33□□□□□ -2.2
SOD3P08294 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.33□□□□□ -2.2
SOD3P08294 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.33□□□□□ -2.2
SOD3P08294 PTP4A1P4-201ENST00000512479 322 ntBASIC1.33□□□□□ -2.2
SOD3P08294 RNU7-51P-201ENST00000516560 62 ntBASIC1.33□□□□□ -2.2
SOD3P08294 RNA5SP337-201ENST00000517007 109 ntBASIC1.33□□□□□ -2.2
SOD3P08294 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.33□□□□□ -2.2
SOD3P08294 AC022616.8-201ENST00000533569 253 ntBASIC1.33□□□□□ -2.2
SOD3P08294 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC1.33□□□□□ -2.2
SOD3P08294 MIR4713-201ENST00000582691 75 ntBASIC1.33□□□□□ -2.2
SOD3P08294 AL031281.1-201ENST00000604049 488 ntBASIC1.33□□□□□ -2.2
SOD3P08294 AC018714.1-201ENST00000605028 208 ntBASIC1.33□□□□□ -2.2
SOD3P08294 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.33□□□□□ -2.2
SOD3P08294 AC004908.3-201ENST00000610248 625 ntBASIC1.33□□□□□ -2.2
SOD3P08294 AP002782.1-201ENST00000623107 614 ntBASIC1.33□□□□□ -2.2
SOD3P08294 AC093648.1-201ENST00000623546 606 ntBASIC1.33□□□□□ -2.2
SOD3P08294 AC092192.1-201ENST00000633154 1018 ntBASIC1.33□□□□□ -2.2
SOD3P08294 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SOD3P08294 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.32□□□□□ -2.2
SOD3P08294 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.32□□□□□ -2.2
SOD3P08294 RNU6-1210P-201ENST00000363775 107 ntBASIC1.32□□□□□ -2.2
SOD3P08294 RNU4-1-201ENST00000363925 141 ntBASIC1.32□□□□□ -2.2
SOD3P08294 RNU6-384P-201ENST00000364900 104 ntBASIC1.32□□□□□ -2.2
SOD3P08294 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC1.32□□□□□ -2.2
SOD3P08294 SNORD14D-201ENST00000384390 87 ntBASIC1.32□□□□□ -2.2
SOD3P08294 RNU11-3P-201ENST00000391111 133 ntBASIC1.32□□□□□ -2.2
SOD3P08294 MIR1287-201ENST00000408492 90 ntBASIC1.32□□□□□ -2.2
SOD3P08294 RNA5SP390-201ENST00000410191 113 ntBASIC1.32□□□□□ -2.2
SOD3P08294 MTCO2P8-201ENST00000412213 658 ntBASIC1.32□□□□□ -2.2
SOD3P08294 AC004965.1-201ENST00000413033 213 ntBASIC1.32□□□□□ -2.2
SOD3P08294 SRIP3-201ENST00000413200 219 ntBASIC1.32□□□□□ -2.2
SOD3P08294 AC114491.1-201ENST00000416095 246 ntBASIC1.32□□□□□ -2.2
SOD3P08294 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.32□□□□□ -2.2
SOD3P08294 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.32□□□□□ -2.2
SOD3P08294 AL353752.1-201ENST00000454946 260 ntBASIC1.32□□□□□ -2.2
SOD3P08294 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC1.32□□□□□ -2.2
SOD3P08294 Y_RNA.687-201ENST00000516558 91 ntBASIC1.32□□□□□ -2.2
SOD3P08294 RN7SKP256-201ENST00000517201 314 ntBASIC1.32□□□□□ -2.2
SOD3P08294 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.32□□□□□ -2.2
SOD3P08294 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.32□□□□□ -2.2
SOD3P08294 AP005435.4-201ENST00000529514 284 ntBASIC1.32□□□□□ -2.2
SOD3P08294 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC1.32□□□□□ -2.2
SOD3P08294 AC018630.3-201ENST00000542637 96 ntBASIC1.32□□□□□ -2.2
SOD3P08294 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC1.32□□□□□ -2.2
SOD3P08294 AC090888.2-201ENST00000559765 1144 ntBASIC1.32□□□□□ -2.2
SOD3P08294 DEFB131E-202ENST00000602581 683 ntBASIC1.32□□□□□ -2.2
SOD3P08294 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.32□□□□□ -2.2
SOD3P08294 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.32□□□□□ -2.2
SOD3P08294 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SOD3P08294 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.32□□□□□ -2.2
SOD3P08294 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.31□□□□□ -2.2
SOD3P08294 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
SOD3P08294 AC073343.1-201ENST00000328239 651 ntBASIC1.31□□□□□ -2.2
SOD3P08294 SNORD56.2-201ENST00000363242 71 ntBASIC1.31□□□□□ -2.2
SOD3P08294 MIR578-201ENST00000384828 96 ntBASIC1.31□□□□□ -2.2
SOD3P08294 MIR597-201ENST00000384968 97 ntBASIC1.31□□□□□ -2.2
SOD3P08294 MIR517C-201ENST00000385103 95 ntBASIC1.31□□□□□ -2.2
SOD3P08294 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
SOD3P08294 AC068050.1-201ENST00000394891 380 ntBASIC1.31□□□□□ -2.2
SOD3P08294 AC009310.1-201ENST00000414414 451 ntBASIC1.31□□□□□ -2.2
SOD3P08294 VN1R36P-201ENST00000414936 291 ntBASIC1.31□□□□□ -2.2
SOD3P08294 AC106883.1-201ENST00000418805 562 ntBASIC1.31□□□□□ -2.2
SOD3P08294 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC1.31□□□□□ -2.2
SOD3P08294 UBE2V1P4-201ENST00000425374 344 ntBASIC1.31□□□□□ -2.2
SOD3P08294 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC1.31□□□□□ -2.2
SOD3P08294 AC245102.2-201ENST00000448956 180 ntBASIC1.31□□□□□ -2.2
SOD3P08294 AMD1P1-201ENST00000457220 922 ntBASIC1.31□□□□□ -2.2
SOD3P08294 FO393415.2-201ENST00000480085 343 ntBASIC1.31□□□□□ -2.2
SOD3P08294 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SOD3P08294 AC112204.1-201ENST00000502591 103 ntBASIC1.31□□□□□ -2.2
SOD3P08294 RNU6-970P-201ENST00000516312 107 ntBASIC1.31□□□□□ -2.2
SOD3P08294 SNORA43.2-201ENST00000516652 128 ntBASIC1.31□□□□□ -2.2
SOD3P08294 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.31□□□□□ -2.2
SOD3P08294 BNIP3P6-201ENST00000549284 499 ntBASIC1.31□□□□□ -2.2
SOD3P08294 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.31□□□□□ -2.2
SOD3P08294 AC091489.2-201ENST00000566263 604 ntBASIC1.31□□□□□ -2.2
SOD3P08294 MIR548AC-201ENST00000585049 88 ntBASIC1.31□□□□□ -2.2
SOD3P08294 MTCO2P2-201ENST00000591258 225 ntBASIC1.31□□□□□ -2.2
SOD3P08294 AL158032.1-201ENST00000605401 106 ntBASIC1.31□□□□□ -2.2
SOD3P08294 AL391834.2-201ENST00000609982 546 ntBASIC1.31□□□□□ -2.2
SOD3P08294 AC068944.2-201ENST00000610373 403 ntBASIC1.31□□□□□ -2.2
SOD3P08294 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.31□□□□□ -2.2
SOD3P08294 AC104010.1-201ENST00000616889 150 ntBASIC1.31□□□□□ -2.2
SOD3P08294 U6.42-201ENST00000618440 107 ntBASIC1.31□□□□□ -2.2
SOD3P08294 SCARNA4-202ENST00000625402 129 ntBASIC1.31□□□□□ -2.2
SOD3P08294 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SOD3P08294 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SOD3P08294 AL391987.6-201ENST00000305671 199 ntBASIC1.3□□□□□ -2.2
SOD3P08294 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
SOD3P08294 RNU1-58P-201ENST00000362413 163 ntBASIC1.3□□□□□ -2.2
SOD3P08294 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SOD3P08294 RNA5SP501-201ENST00000410990 112 ntBASIC1.3□□□□□ -2.2
SOD3P08294 MTATP6P19-201ENST00000413797 659 ntBASIC1.3□□□□□ -2.2
SOD3P08294 CR769776.1-201ENST00000441254 787 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms