Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 CKS1BP2-201ENST00000497342 240 ntBASIC1.64□□□□□ -2.15
HLA-DPB1P04440 SNORA4.4-201ENST00000515921 135 ntBASIC1.64□□□□□ -2.15
HLA-DPB1P04440 RNU2-53P-201ENST00000516257 147 ntBASIC1.64□□□□□ -2.15
HLA-DPB1P04440 SNORD27.1-201ENST00000516319 72 ntBASIC1.64□□□□□ -2.15
HLA-DPB1P04440 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.64□□□□□ -2.15
HLA-DPB1P04440 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.64□□□□□ -2.15
HLA-DPB1P04440 AP002453.2-201ENST00000533503 320 ntBASIC1.64□□□□□ -2.15
HLA-DPB1P04440 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.64□□□□□ -2.15
HLA-DPB1P04440 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.64□□□□□ -2.15
HLA-DPB1P04440 MIR4419B-201ENST00000577260 68 ntBASIC1.64□□□□□ -2.15
HLA-DPB1P04440 MIR3618-201ENST00000580330 88 ntBASIC1.64□□□□□ -2.15
HLA-DPB1P04440 Z84480.1-201ENST00000605131 311 ntBASIC1.64□□□□□ -2.15
HLA-DPB1P04440 AC098614.4-201ENST00000607601 462 ntBASIC1.64□□□□□ -2.15
HLA-DPB1P04440 AC096772.1-201ENST00000609146 564 ntBASIC1.64□□□□□ -2.15
HLA-DPB1P04440 AL161423.1-201ENST00000613700 262 ntBASIC1.64□□□□□ -2.15
HLA-DPB1P04440 RMST_4.1-201ENST00000616886 107 ntBASIC1.64□□□□□ -2.15
HLA-DPB1P04440 RN7SL853P-201ENST00000617250 223 ntBASIC1.64□□□□□ -2.15
HLA-DPB1P04440 RMST_7.1-201ENST00000621935 268 ntBASIC1.64□□□□□ -2.15
HLA-DPB1P04440 SCARNA4-202ENST00000625402 129 ntBASIC1.64□□□□□ -2.15
HLA-DPB1P04440 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.64□□□□□ -2.15
HLA-DPB1P04440 MTND5P17-201ENST00000418405 1603 ntBASIC1.64□□□□□ -2.15
HLA-DPB1P04440 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.64□□□□□ -2.15
HLA-DPB1P04440 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
HLA-DPB1P04440 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
HLA-DPB1P04440 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
HLA-DPB1P04440 OR4G2P-201ENST00000328113 903 ntBASIC1.63□□□□□ -2.15
HLA-DPB1P04440 RNU6-487P-201ENST00000365430 104 ntBASIC1.63□□□□□ -2.15
HLA-DPB1P04440 RNU6-108P-201ENST00000365558 107 ntBASIC1.63□□□□□ -2.15
HLA-DPB1P04440 MIR454-201ENST00000390180 115 ntBASIC1.63□□□□□ -2.15
HLA-DPB1P04440 AL049545.1-201ENST00000401856 572 ntBASIC1.63□□□□□ -2.15
HLA-DPB1P04440 AL355497.1-201ENST00000406262 551 ntBASIC1.63□□□□□ -2.15
HLA-DPB1P04440 RNU6-387P-201ENST00000411331 105 ntBASIC1.63□□□□□ -2.15
HLA-DPB1P04440 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DPB1P04440 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DPB1P04440 AC074117.2-201ENST00000417130 397 ntBASIC1.63□□□□□ -2.15
HLA-DPB1P04440 AL445685.2-201ENST00000422551 342 ntBASIC1.63□□□□□ -2.15
HLA-DPB1P04440 AL669831.1-202ENST00000428504 417 ntBASIC1.63□□□□□ -2.15
HLA-DPB1P04440 GTF2IP13-201ENST00000438487 386 ntBASIC1.63□□□□□ -2.15
HLA-DPB1P04440 AC016691.1-201ENST00000441321 413 ntBASIC1.63□□□□□ -2.15
HLA-DPB1P04440 AC009238.1-201ENST00000442165 424 ntBASIC1.63□□□□□ -2.15
HLA-DPB1P04440 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DPB1P04440 AC244505.5-201ENST00000443639 207 ntBASIC1.63□□□□□ -2.15
HLA-DPB1P04440 AC079781.2-201ENST00000446424 169 ntBASIC1.63□□□□□ -2.15
HLA-DPB1P04440 AC009237.6-201ENST00000446969 424 ntBASIC1.63□□□□□ -2.15
HLA-DPB1P04440 PPP1R2P5-201ENST00000457256 603 ntBASIC1.63□□□□□ -2.15
HLA-DPB1P04440 BET1P1-201ENST00000482276 359 ntBASIC1.63□□□□□ -2.15
HLA-DPB1P04440 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DPB1P04440 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DPB1P04440 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DPB1P04440 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DPB1P04440 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DPB1P04440 MIR514B-201ENST00000516774 80 ntBASIC1.63□□□□□ -2.15
HLA-DPB1P04440 SNORA48.11-201ENST00000517015 89 ntBASIC1.63□□□□□ -2.15
HLA-DPB1P04440 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC1.63□□□□□ -2.15
HLA-DPB1P04440 AC118273.2-201ENST00000532092 465 ntBASIC1.63□□□□□ -2.15
HLA-DPB1P04440 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DPB1P04440 AC090897.2-201ENST00000581715 130 ntBASIC1.63□□□□□ -2.15
HLA-DPB1P04440 MIR3945-201ENST00000581853 98 ntBASIC1.63□□□□□ -2.15
HLA-DPB1P04440 AP001486.3-201ENST00000615334 372 ntBASIC1.63□□□□□ -2.15
HLA-DPB1P04440 uc_338.15-201ENST00000615470 191 ntBASIC1.63□□□□□ -2.15
HLA-DPB1P04440 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC1.63□□□□□ -2.15
HLA-DPB1P04440 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
HLA-DPB1P04440 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
HLA-DPB1P04440 SNORD114-1-201ENST00000362705 72 ntBASIC1.62□□□□□ -2.15
HLA-DPB1P04440 RNU6-78P-201ENST00000362897 107 ntBASIC1.62□□□□□ -2.15
HLA-DPB1P04440 SNORD56.1-201ENST00000362913 68 ntBASIC1.62□□□□□ -2.15
HLA-DPB1P04440 RNU6-1287P-201ENST00000362914 107 ntBASIC1.62□□□□□ -2.15
HLA-DPB1P04440 RNU4-91P-201ENST00000364778 135 ntBASIC1.62□□□□□ -2.15
HLA-DPB1P04440 RNU6-715P-201ENST00000365204 103 ntBASIC1.62□□□□□ -2.15
HLA-DPB1P04440 SNORA25B-201ENST00000365507 128 ntBASIC1.62□□□□□ -2.15
HLA-DPB1P04440 RNU6-45P-201ENST00000384471 107 ntBASIC1.62□□□□□ -2.15
HLA-DPB1P04440 RNU6-1060P-201ENST00000384664 107 ntBASIC1.62□□□□□ -2.15
HLA-DPB1P04440 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
HLA-DPB1P04440 RN7SKP142-201ENST00000411236 328 ntBASIC1.62□□□□□ -2.15
HLA-DPB1P04440 RNU6-607P-201ENST00000411283 108 ntBASIC1.62□□□□□ -2.15
HLA-DPB1P04440 EDDM3CP-201ENST00000415977 425 ntBASIC1.62□□□□□ -2.15
HLA-DPB1P04440 AC003989.2-201ENST00000440224 169 ntBASIC1.62□□□□□ -2.15
HLA-DPB1P04440 IPO7P1-201ENST00000442031 636 ntBASIC1.62□□□□□ -2.15
HLA-DPB1P04440 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DPB1P04440 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.62□□□□□ -2.15
HLA-DPB1P04440 CYP2C59P-201ENST00000457790 269 ntBASIC1.62□□□□□ -2.15
HLA-DPB1P04440 RPL21P99-201ENST00000480369 423 ntBASIC1.62□□□□□ -2.15
HLA-DPB1P04440 AC107393.1-201ENST00000512403 346 ntBASIC1.62□□□□□ -2.15
HLA-DPB1P04440 RNU2-44P-201ENST00000516795 194 ntBASIC1.62□□□□□ -2.15
HLA-DPB1P04440 SNORA31.25-201ENST00000517242 134 ntBASIC1.62□□□□□ -2.15
HLA-DPB1P04440 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.62□□□□□ -2.15
HLA-DPB1P04440 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DPB1P04440 MIR5692A1-201ENST00000580523 69 ntBASIC1.62□□□□□ -2.15
HLA-DPB1P04440 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC1.62□□□□□ -2.15
HLA-DPB1P04440 AC245014.2-201ENST00000603689 287 ntBASIC1.62□□□□□ -2.15
HLA-DPB1P04440 AC246785.4-201ENST00000605374 287 ntBASIC1.62□□□□□ -2.15
HLA-DPB1P04440 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC1.62□□□□□ -2.15
HLA-DPB1P04440 AC026585.1-201ENST00000619582 524 ntBASIC1.62□□□□□ -2.15
HLA-DPB1P04440 AP003400.5-201ENST00000624827 617 ntBASIC1.62□□□□□ -2.15
HLA-DPB1P04440 MIR203B-201ENST00000636080 86 ntBASIC1.62□□□□□ -2.15
HLA-DPB1P04440 U6.114-201ENST00000636407 96 ntBASIC1.62□□□□□ -2.15
HLA-DPB1P04440 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.62□□□□□ -2.15
HLA-DPB1P04440 HAUS6P2-201ENST00000433254 2404 ntBASIC1.62□□□□□ -2.15
HLA-DPB1P04440 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
HLA-DPB1P04440 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 133 ms