Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 NDUFA8P1-201ENST00000605525 367 ntBASIC0.49□□□□□ -2.33
ABCA1O95477 AP000676.3-201ENST00000623299 569 ntBASIC0.49□□□□□ -2.33
ABCA1O95477 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC0.49□□□□□ -2.33
ABCA1O95477 RNU6-105P-201ENST00000363909 104 ntBASIC0.49□□□□□ -2.33
ABCA1O95477 RNU6-650P-201ENST00000365658 111 ntBASIC0.49□□□□□ -2.33
ABCA1O95477 MIR329-2-201ENST00000385029 84 ntBASIC0.49□□□□□ -2.33
ABCA1O95477 RPS20P10-201ENST00000451209 253 ntBASIC0.49□□□□□ -2.33
ABCA1O95477 RNA5SP269-201ENST00000459032 137 ntBASIC0.49□□□□□ -2.33
ABCA1O95477 RPL39P28-201ENST00000465655 155 ntBASIC0.49□□□□□ -2.33
ABCA1O95477 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC0.49□□□□□ -2.33
ABCA1O95477 UTP23-205ENST00000520733 369 ntTSL 3 BASIC0.49□□□□□ -2.33
ABCA1O95477 RRN3P3-201ENST00000549207 578 ntBASIC0.49□□□□□ -2.33
ABCA1O95477 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC0.49□□□□□ -2.33
ABCA1O95477 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.49□□□□□ -2.33
ABCA1O95477 AC126177.8-201ENST00000618339 1015 ntBASIC0.49□□□□□ -2.33
ABCA1O95477 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.49□□□□□ -2.33
ABCA1O95477 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC0.48□□□□□ -2.33
ABCA1O95477 DLEU2_6.3-201ENST00000340052 136 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
ABCA1O95477 SNORA25-201ENST00000384384 134 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 RNU6-360P-201ENST00000390944 104 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 RNU6-932P-201ENST00000391108 106 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.48□□□□□ -2.33
ABCA1O95477 AC139712.2-201ENST00000424302 339 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 AC008267.5-201ENST00000424928 265 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 AL161651.1-201ENST00000440882 223 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC0.48□□□□□ -2.33
ABCA1O95477 MTCYBP43-201ENST00000513621 740 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 RNU7-40P-201ENST00000516397 64 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 RNA5SP285-201ENST00000516619 119 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 RNA5SP404-201ENST00000517118 132 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.48□□□□□ -2.33
ABCA1O95477 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.48□□□□□ -2.33
ABCA1O95477 AC022616.8-201ENST00000533569 253 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 AC018630.3-201ENST00000542637 96 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.48□□□□□ -2.33
ABCA1O95477 AC090115.3-201ENST00000553218 849 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 CYP3A52P-201ENST00000563326 91 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 DLEU2_6.2-201ENST00000620994 136 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.48□□□□□ -2.33
ABCA1O95477 RNU6-1187P-201ENST00000364771 110 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 Y_RNA.549-201ENST00000384657 102 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 RNU6-114P-201ENST00000384704 105 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 PIGPP2-201ENST00000411569 458 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 AL139421.1-201ENST00000423010 169 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 AL358794.1-201ENST00000445689 381 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 PGBD4P5-201ENST00000445958 426 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 AC244505.3-201ENST00000454598 187 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 AL163195.1-201ENST00000496941 348 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 RPF2P2-201ENST00000504693 896 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 RNU6-1183P-201ENST00000517054 60 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC0.48□□□□□ -2.33
ABCA1O95477 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC0.48□□□□□ -2.33
ABCA1O95477 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.48□□□□□ -2.33
ABCA1O95477 AC010975.3-201ENST00000618727 978 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 AC068787.1-201ENST00000623908 691 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 AC009033.1-201ENST00000624279 431 ntBASIC0.48□□□□□ -2.33
ABCA1O95477 MIR302D-201ENST00000362275 68 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 RNU6-944P-201ENST00000364023 107 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 RNU1-119P-201ENST00000391122 165 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 MTCO1P56-201ENST00000401674 224 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 FTH1P15-201ENST00000406984 280 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 AC019178.2-201ENST00000423595 505 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 AC073614.1-201ENST00000438690 650 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 MTND2P20-201ENST00000440805 661 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC0.47□□□□□ -2.33
ABCA1O95477 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.47□□□□□ -2.33
ABCA1O95477 SCARNA16.2-201ENST00000516520 172 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 AC136618.2-201ENST00000575091 400 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC0.47□□□□□ -2.33
ABCA1O95477 AC010620.1-201ENST00000601088 1102 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 AC069304.2-201ENST00000605154 435 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 AP000654.2-201ENST00000605633 586 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 AL365434.2-201ENST00000607979 234 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
ABCA1O95477 RNU6-28P-201ENST00000362378 107 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 SNORA63.3-201ENST00000362682 132 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 RNU6-1010P-201ENST00000362757 107 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC0.47□□□□□ -2.33
ABCA1O95477 RNU6-481P-201ENST00000384194 107 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 MIR19B1-201ENST00000384829 87 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 MIR515-2-201ENST00000384883 83 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 MIR515-1-201ENST00000384884 83 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 MRPS36P1-201ENST00000421291 307 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.47□□□□□ -2.33
ABCA1O95477 MTND1P28-201ENST00000435623 950 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC0.47□□□□□ -2.33
ABCA1O95477 snoU13.8-201ENST00000458890 104 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC0.47□□□□□ -2.33
ABCA1O95477 MIR4653-201ENST00000585107 83 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 BNIP3P16-201ENST00000589779 534 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 AC013244.2-201ENST00000603396 103 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 MZT1P2-201ENST00000604387 248 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 AC093788.1-201ENST00000609356 927 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 MIR5087-201ENST00000635826 76 ntBASIC0.47□□□□□ -2.33
ABCA1O95477 AC092447.10-201ENST00000620607 1652 ntBASIC0.46□□□□□ -2.34
ABCA1O95477 RNU6-418P-201ENST00000384035 107 ntBASIC0.46□□□□□ -2.34
ABCA1O95477 MIR92A1-201ENST00000385233 78 ntBASIC0.46□□□□□ -2.34
ABCA1O95477 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
ABCA1O95477 ISCA1P1-201ENST00000426679 387 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms