Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RAPGEF3O95398 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RAPGEF3O95398 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.11□□□□□ -1.75
RAPGEF3O95398 RNU6-1227P-201ENST00000383981 107 ntBASIC4.11□□□□□ -1.75
RAPGEF3O95398 RNU6-166P-201ENST00000384371 107 ntBASIC4.11□□□□□ -1.75
RAPGEF3O95398 RNU6-601P-201ENST00000384540 107 ntBASIC4.11□□□□□ -1.75
RAPGEF3O95398 SNORA1.3-201ENST00000384676 136 ntBASIC4.11□□□□□ -1.75
RAPGEF3O95398 RNU6-95P-201ENST00000384697 107 ntBASIC4.11□□□□□ -1.75
RAPGEF3O95398 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
RAPGEF3O95398 RNY4P36-201ENST00000391116 96 ntBASIC4.11□□□□□ -1.75
RAPGEF3O95398 RNU6-370P-201ENST00000411008 104 ntBASIC4.11□□□□□ -1.75
RAPGEF3O95398 AL159169.1-201ENST00000421119 127 ntBASIC4.11□□□□□ -1.75
RAPGEF3O95398 AF228730.4-201ENST00000421457 183 ntBASIC4.11□□□□□ -1.75
RAPGEF3O95398 AC005534.2-201ENST00000431047 433 ntBASIC4.11□□□□□ -1.75
RAPGEF3O95398 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.11□□□□□ -1.75
RAPGEF3O95398 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.11□□□□□ -1.75
RAPGEF3O95398 AC090525.1-201ENST00000479116 478 ntBASIC4.11□□□□□ -1.75
RAPGEF3O95398 AL049830.2-201ENST00000480072 201 ntBASIC4.11□□□□□ -1.75
RAPGEF3O95398 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.11□□□□□ -1.75
RAPGEF3O95398 AC116337.1-201ENST00000509680 687 ntBASIC4.11□□□□□ -1.75
RAPGEF3O95398 AC092436.3-201ENST00000511788 257 ntBASIC4.11□□□□□ -1.75
RAPGEF3O95398 RNU6-572P-201ENST00000516724 80 ntBASIC4.11□□□□□ -1.75
RAPGEF3O95398 RNU6-703P-201ENST00000516946 107 ntBASIC4.11□□□□□ -1.75
RAPGEF3O95398 RNU1-54P-201ENST00000517181 120 ntBASIC4.11□□□□□ -1.75
RAPGEF3O95398 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.11□□□□□ -1.75
RAPGEF3O95398 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.11□□□□□ -1.75
RAPGEF3O95398 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC4.11□□□□□ -1.75
RAPGEF3O95398 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.11□□□□□ -1.75
RAPGEF3O95398 AC098657.3-201ENST00000620434 263 ntBASIC4.11□□□□□ -1.75
RAPGEF3O95398 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
RAPGEF3O95398 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RAPGEF3O95398 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC4.11□□□□□ -1.75
RAPGEF3O95398 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
RAPGEF3O95398 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC4.11□□□□□ -1.75
RAPGEF3O95398 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RAPGEF3O95398 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RAPGEF3O95398 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
RAPGEF3O95398 AC016831.2-201ENST00000417179 352 ntBASIC4.1□□□□□ -1.75
RAPGEF3O95398 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC4.1□□□□□ -1.75
RAPGEF3O95398 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.1□□□□□ -1.75
RAPGEF3O95398 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RAPGEF3O95398 AC007560.1-201ENST00000426912 237 ntBASIC4.1□□□□□ -1.75
RAPGEF3O95398 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RAPGEF3O95398 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC4.1□□□□□ -1.75
RAPGEF3O95398 SSXP4-201ENST00000451349 245 ntBASIC4.1□□□□□ -1.75
RAPGEF3O95398 MTATP6P7-201ENST00000453315 681 ntBASIC4.1□□□□□ -1.75
RAPGEF3O95398 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RAPGEF3O95398 AC092798.1-201ENST00000458542 409 ntBASIC4.1□□□□□ -1.75
RAPGEF3O95398 RNU7-152P-201ENST00000458982 64 ntBASIC4.1□□□□□ -1.75
RAPGEF3O95398 RNU6-1016P-201ENST00000516689 94 ntBASIC4.1□□□□□ -1.75
RAPGEF3O95398 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.1□□□□□ -1.75
RAPGEF3O95398 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.1□□□□□ -1.75
RAPGEF3O95398 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC4.1□□□□□ -1.75
RAPGEF3O95398 AMZ2P1-203ENST00000565833 850 ntBASIC4.1□□□□□ -1.75
RAPGEF3O95398 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.1□□□□□ -1.75
RAPGEF3O95398 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC4.1□□□□□ -1.75
RAPGEF3O95398 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC4.1□□□□□ -1.75
RAPGEF3O95398 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.1□□□□□ -1.75
RAPGEF3O95398 U7.8-201ENST00000619968 63 ntBASIC4.1□□□□□ -1.75
RAPGEF3O95398 MTND4LP32-201ENST00000636111 270 ntBASIC4.1□□□□□ -1.75
RAPGEF3O95398 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
RAPGEF3O95398 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
RAPGEF3O95398 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.1□□□□□ -1.75
RAPGEF3O95398 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RAPGEF3O95398 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RAPGEF3O95398 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.75
RAPGEF3O95398 SNORD62.1-201ENST00000362541 86 ntBASIC4.09□□□□□ -1.75
RAPGEF3O95398 RNU6-1035P-201ENST00000384477 107 ntBASIC4.09□□□□□ -1.75
RAPGEF3O95398 SNORD116-29-201ENST00000384516 83 ntBASIC4.09□□□□□ -1.75
RAPGEF3O95398 MIR888-201ENST00000401186 77 ntBASIC4.09□□□□□ -1.75
RAPGEF3O95398 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
RAPGEF3O95398 RNA5SP274-201ENST00000410484 108 ntBASIC4.09□□□□□ -1.75
RAPGEF3O95398 AL354751.2-201ENST00000415471 210 ntBASIC4.09□□□□□ -1.75
RAPGEF3O95398 AC245054.2-201ENST00000415639 319 ntBASIC4.09□□□□□ -1.75
RAPGEF3O95398 MTCO2P12-201ENST00000427426 682 ntBASIC4.09□□□□□ -1.75
RAPGEF3O95398 RNA5SP310-201ENST00000459084 116 ntBASIC4.09□□□□□ -1.75
RAPGEF3O95398 RPS27AP9-201ENST00000477681 438 ntBASIC4.09□□□□□ -1.75
RAPGEF3O95398 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.09□□□□□ -1.75
RAPGEF3O95398 APOOP3-201ENST00000536787 586 ntBASIC4.09□□□□□ -1.75
RAPGEF3O95398 AC011602.1-201ENST00000546484 331 ntBASIC4.09□□□□□ -1.75
RAPGEF3O95398 MIR4474-201ENST00000579189 78 ntBASIC4.09□□□□□ -1.75
RAPGEF3O95398 ELOCP5-201ENST00000604924 333 ntBASIC4.09□□□□□ -1.75
RAPGEF3O95398 MIR6128-201ENST00000615528 109 ntBASIC4.09□□□□□ -1.75
RAPGEF3O95398 AC084781.2-201ENST00000615568 161 ntBASIC4.09□□□□□ -1.75
RAPGEF3O95398 MIR7111-201ENST00000619751 72 ntBASIC4.09□□□□□ -1.75
RAPGEF3O95398 Z69720.2-201ENST00000624755 279 ntBASIC4.09□□□□□ -1.75
RAPGEF3O95398 U2.21-201ENST00000637295 81 ntBASIC4.09□□□□□ -1.75
RAPGEF3O95398 AC092593.1-201ENST00000515413 1815 ntBASIC4.09□□□□□ -1.76
RAPGEF3O95398 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.09□□□□□ -1.76
RAPGEF3O95398 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
RAPGEF3O95398 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RAPGEF3O95398 MIR10A-201ENST00000385043 110 ntBASIC4.08□□□□□ -1.76
RAPGEF3O95398 RNU6-1106P-201ENST00000390845 107 ntBASIC4.08□□□□□ -1.76
RAPGEF3O95398 5S_rRNA.2-201ENST00000391293 112 ntBASIC4.08□□□□□ -1.76
RAPGEF3O95398 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
RAPGEF3O95398 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
RAPGEF3O95398 RNA5SP425-201ENST00000410336 112 ntBASIC4.08□□□□□ -1.76
RAPGEF3O95398 RPL26P27-201ENST00000414397 437 ntBASIC4.08□□□□□ -1.76
RAPGEF3O95398 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.08□□□□□ -1.76
RAPGEF3O95398 AL590632.1-201ENST00000424289 371 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms