Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 AC073901.1-201ENST00000462471 408 ntBASIC2.86□□□□□ -1.95
MBD4O95243 RPL37P25-201ENST00000507308 276 ntBASIC2.86□□□□□ -1.95
MBD4O95243 SNORA25.17-201ENST00000517184 124 ntBASIC2.86□□□□□ -1.95
MBD4O95243 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.86□□□□□ -1.95
MBD4O95243 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.86□□□□□ -1.95
MBD4O95243 AC091544.4-201ENST00000555268 342 ntBASIC2.86□□□□□ -1.95
MBD4O95243 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.86□□□□□ -1.95
MBD4O95243 MIR4658-201ENST00000584344 65 ntBASIC2.86□□□□□ -1.95
MBD4O95243 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.86□□□□□ -1.95
MBD4O95243 uc_338.15-201ENST00000615470 191 ntBASIC2.86□□□□□ -1.95
MBD4O95243 AC010297.1-201ENST00000623948 149 ntBASIC2.86□□□□□ -1.95
MBD4O95243 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
MBD4O95243 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.85□□□□□ -1.95
MBD4O95243 AC002543.1-201ENST00000299783 1954 ntBASIC2.85□□□□□ -1.95
MBD4O95243 RNU6-37P-201ENST00000362692 107 ntBASIC2.85□□□□□ -1.95
MBD4O95243 SNORA25.6-201ENST00000364121 118 ntBASIC2.85□□□□□ -1.95
MBD4O95243 RNU6-11P-201ENST00000364234 107 ntBASIC2.85□□□□□ -1.95
MBD4O95243 RNA5SP125-201ENST00000364843 120 ntBASIC2.85□□□□□ -1.95
MBD4O95243 RNA5SP240-201ENST00000365355 128 ntBASIC2.85□□□□□ -1.95
MBD4O95243 Y_RNA.381-201ENST00000365666 102 ntBASIC2.85□□□□□ -1.95
MBD4O95243 RNU6-25P-201ENST00000383873 107 ntBASIC2.85□□□□□ -1.95
MBD4O95243 RNU6-1-201ENST00000383898 107 ntBASIC2.85□□□□□ -1.95
MBD4O95243 RNU6-48P-201ENST00000384161 107 ntBASIC2.85□□□□□ -1.95
MBD4O95243 RNU6-36P-201ENST00000384172 107 ntBASIC2.85□□□□□ -1.95
MBD4O95243 RNU6-4P-201ENST00000384205 107 ntBASIC2.85□□□□□ -1.95
MBD4O95243 RNU6-5P-201ENST00000384238 107 ntBASIC2.85□□□□□ -1.95
MBD4O95243 RNU6-3P-201ENST00000384314 107 ntBASIC2.85□□□□□ -1.95
MBD4O95243 RNU6-16P-201ENST00000384385 107 ntBASIC2.85□□□□□ -1.95
MBD4O95243 RNU6-15P-201ENST00000384534 107 ntBASIC2.85□□□□□ -1.95
MBD4O95243 RNU6-2-201ENST00000384627 107 ntBASIC2.85□□□□□ -1.95
MBD4O95243 RNU6-29P-201ENST00000384637 107 ntBASIC2.85□□□□□ -1.95
MBD4O95243 SNORA41-201ENST00000384675 132 ntBASIC2.85□□□□□ -1.95
MBD4O95243 RNU6-9-201ENST00000384776 107 ntBASIC2.85□□□□□ -1.95
MBD4O95243 RNU6-33P-201ENST00000384793 107 ntBASIC2.85□□□□□ -1.95
MBD4O95243 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
MBD4O95243 RNA5SP508-201ENST00000411327 119 ntBASIC2.85□□□□□ -1.95
MBD4O95243 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.85□□□□□ -1.95
MBD4O95243 AL591043.1-201ENST00000432461 424 ntBASIC2.85□□□□□ -1.95
MBD4O95243 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.85□□□□□ -1.95
MBD4O95243 AC140059.1-201ENST00000489238 361 ntBASIC2.85□□□□□ -1.95
MBD4O95243 MIR3670-2-201ENST00000582974 65 ntBASIC2.85□□□□□ -1.95
MBD4O95243 MIR3670-1-201ENST00000584160 65 ntBASIC2.85□□□□□ -1.95
MBD4O95243 MIR3670-3-201ENST00000584855 65 ntBASIC2.85□□□□□ -1.95
MBD4O95243 AL138963.2-201ENST00000605137 226 ntBASIC2.85□□□□□ -1.95
MBD4O95243 RNU6-6P-201ENST00000606623 107 ntBASIC2.85□□□□□ -1.95
MBD4O95243 MIR3670-4-201ENST00000612260 65 ntBASIC2.85□□□□□ -1.95
MBD4O95243 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.85□□□□□ -1.95
MBD4O95243 AC007336.1-201ENST00000576365 3828 ntBASIC2.85□□□□□ -1.95
MBD4O95243 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.84□□□□□ -1.95
MBD4O95243 SNORD56.1-201ENST00000362913 68 ntBASIC2.84□□□□□ -1.95
MBD4O95243 RNU1-72P-201ENST00000362976 153 ntBASIC2.84□□□□□ -1.95
MBD4O95243 RNU6-266P-201ENST00000364225 107 ntBASIC2.84□□□□□ -1.95
MBD4O95243 Y_RNA.409-201ENST00000383990 98 ntBASIC2.84□□□□□ -1.95
MBD4O95243 RNU6-301P-201ENST00000384277 107 ntBASIC2.84□□□□□ -1.95
MBD4O95243 MIR186-201ENST00000384988 86 ntBASIC2.84□□□□□ -1.95
MBD4O95243 SNORD37.1-201ENST00000390968 65 ntBASIC2.84□□□□□ -1.95
MBD4O95243 RNU2-23P-201ENST00000410545 195 ntBASIC2.84□□□□□ -1.95
MBD4O95243 VN1R108P-201ENST00000431580 830 ntBASIC2.84□□□□□ -1.95
MBD4O95243 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.84□□□□□ -1.95
MBD4O95243 RPS12P2-201ENST00000439728 269 ntBASIC2.84□□□□□ -1.95
MBD4O95243 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
MBD4O95243 DYNLL1P5-201ENST00000467158 270 ntBASIC2.84□□□□□ -1.95
MBD4O95243 CKS1BP2-201ENST00000497342 240 ntBASIC2.84□□□□□ -1.95
MBD4O95243 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.84□□□□□ -1.95
MBD4O95243 AF213884.2-201ENST00000510417 903 ntBASIC2.84□□□□□ -1.95
MBD4O95243 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.84□□□□□ -1.95
MBD4O95243 AC245505.1-201ENST00000556398 224 ntBASIC2.84□□□□□ -1.95
MBD4O95243 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.84□□□□□ -1.95
MBD4O95243 MIR5583-1-201ENST00000580941 59 ntBASIC2.84□□□□□ -1.95
MBD4O95243 MIR4424-201ENST00000585257 86 ntBASIC2.84□□□□□ -1.95
MBD4O95243 AL049779.4-201ENST00000604500 156 ntBASIC2.84□□□□□ -1.95
MBD4O95243 AC002044.1-201ENST00000606707 158 ntBASIC2.84□□□□□ -1.95
MBD4O95243 AC067747.1-201ENST00000608026 250 ntBASIC2.84□□□□□ -1.95
MBD4O95243 AC087241.4-201ENST00000612441 480 ntBASIC2.84□□□□□ -1.95
MBD4O95243 AC015540.1-201ENST00000615828 501 ntBASIC2.84□□□□□ -1.95
MBD4O95243 AC068792.1-201ENST00000621354 417 ntBASIC2.84□□□□□ -1.95
MBD4O95243 AC007792.1-201ENST00000623023 402 ntBASIC2.84□□□□□ -1.95
MBD4O95243 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
MBD4O95243 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.83□□□□□ -1.96
MBD4O95243 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
MBD4O95243 RNU6-527P-201ENST00000363425 104 ntBASIC2.83□□□□□ -1.96
MBD4O95243 RNU4-75P-201ENST00000364621 146 ntBASIC2.83□□□□□ -1.96
MBD4O95243 RNU1-138P-201ENST00000384093 164 ntBASIC2.83□□□□□ -1.96
MBD4O95243 Y_RNA.517-201ENST00000384551 106 ntBASIC2.83□□□□□ -1.96
MBD4O95243 RNU6-1140P-201ENST00000410517 106 ntBASIC2.83□□□□□ -1.96
MBD4O95243 RNU4-53P-201ENST00000410828 140 ntBASIC2.83□□□□□ -1.96
MBD4O95243 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.83□□□□□ -1.96
MBD4O95243 DLGAP5P1-201ENST00000430307 464 ntBASIC2.83□□□□□ -1.96
MBD4O95243 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC2.83□□□□□ -1.96
MBD4O95243 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.83□□□□□ -1.96
MBD4O95243 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.83□□□□□ -1.96
MBD4O95243 RNU6-377P-201ENST00000515965 102 ntBASIC2.83□□□□□ -1.96
MBD4O95243 AP005902.1-201ENST00000521358 186 ntBASIC2.83□□□□□ -1.96
MBD4O95243 AC022880.1-201ENST00000534017 973 ntBASIC2.83□□□□□ -1.96
MBD4O95243 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.83□□□□□ -1.96
MBD4O95243 SNORD53-201ENST00000579969 78 ntBASIC2.83□□□□□ -1.96
MBD4O95243 HULC.1-201ENST00000612720 240 ntBASIC2.83□□□□□ -1.96
MBD4O95243 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
MBD4O95243 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.83□□□□□ -1.96
MBD4O95243 U4atac.1-201ENST00000618345 95 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms