Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AL592182.3-201ENST00000642132 3304 ntBASIC5.09□□□□□ -1.59
ACTN4O43707 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.09□□□□□ -1.6
ACTN4O43707 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
ACTN4O43707 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
ACTN4O43707 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.08□□□□□ -1.6
ACTN4O43707 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
ACTN4O43707 RNA5SP87-201ENST00000384155 118 ntBASIC5.08□□□□□ -1.6
ACTN4O43707 SNORA26.3-201ENST00000391119 136 ntBASIC5.08□□□□□ -1.6
ACTN4O43707 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC5.08□□□□□ -1.6
ACTN4O43707 AC010285.1-201ENST00000470580 392 ntBASIC5.08□□□□□ -1.6
ACTN4O43707 AC008897.1-201ENST00000494006 347 ntBASIC5.08□□□□□ -1.6
ACTN4O43707 RPL31P61-201ENST00000496160 376 ntBASIC5.08□□□□□ -1.6
ACTN4O43707 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC5.08□□□□□ -1.6
ACTN4O43707 AC051619.2-201ENST00000559063 397 ntBASIC5.08□□□□□ -1.6
ACTN4O43707 MIR4443-201ENST00000585052 53 ntBASIC5.08□□□□□ -1.6
ACTN4O43707 AL021997.2-201ENST00000615674 271 ntBASIC5.08□□□□□ -1.6
ACTN4O43707 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC5.08□□□□□ -1.6
ACTN4O43707 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC5.08□□□□□ -1.6
ACTN4O43707 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
ACTN4O43707 AC090971.4-201ENST00000560291 1800 ntBASIC5.08□□□□□ -1.6
ACTN4O43707 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
ACTN4O43707 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.08□□□□□ -1.6
ACTN4O43707 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
ACTN4O43707 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.08□□□□□ -1.6
ACTN4O43707 AC073073.2-201ENST00000609827 2578 ntBASIC5.08□□□□□ -1.6
ACTN4O43707 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC5.08□□□□□ -1.6
ACTN4O43707 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ACTN4O43707 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
ACTN4O43707 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.07□□□□□ -1.6
ACTN4O43707 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
ACTN4O43707 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ACTN4O43707 AC126755.2-208ENST00000327792 462 ntBASIC5.07□□□□□ -1.6
ACTN4O43707 AC138969.1-213ENST00000331436 462 ntBASIC5.07□□□□□ -1.6
ACTN4O43707 RNU6-32P-201ENST00000383948 107 ntBASIC5.07□□□□□ -1.6
ACTN4O43707 RNU6-13P-201ENST00000384248 107 ntBASIC5.07□□□□□ -1.6
ACTN4O43707 SNORD116-21-201ENST00000384507 92 ntBASIC5.07□□□□□ -1.6
ACTN4O43707 RNU6-12P-201ENST00000384604 107 ntBASIC5.07□□□□□ -1.6
ACTN4O43707 RNU6-41P-201ENST00000384741 107 ntBASIC5.07□□□□□ -1.6
ACTN4O43707 Y_RNA.584-201ENST00000391090 114 ntBASIC5.07□□□□□ -1.6
ACTN4O43707 HDGFP1-201ENST00000405943 252 ntBASIC5.07□□□□□ -1.6
ACTN4O43707 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.07□□□□□ -1.6
ACTN4O43707 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC5.07□□□□□ -1.6
ACTN4O43707 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC5.07□□□□□ -1.6
ACTN4O43707 RPL26P9-201ENST00000457466 433 ntBASIC5.07□□□□□ -1.6
ACTN4O43707 AC006517.1-201ENST00000480485 328 ntBASIC5.07□□□□□ -1.6
ACTN4O43707 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC5.07□□□□□ -1.6
ACTN4O43707 SNORA70.16-201ENST00000516390 95 ntBASIC5.07□□□□□ -1.6
ACTN4O43707 SNORA31.23-201ENST00000517219 133 ntBASIC5.07□□□□□ -1.6
ACTN4O43707 MIR3934-201ENST00000579806 107 ntBASIC5.07□□□□□ -1.6
ACTN4O43707 RN7SL52P-201ENST00000584271 284 ntBASIC5.07□□□□□ -1.6
ACTN4O43707 AC006065.5-201ENST00000623427 349 ntBASIC5.07□□□□□ -1.6
ACTN4O43707 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ACTN4O43707 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ACTN4O43707 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
ACTN4O43707 MAPK10-286ENST00000641208 8747 ntBASIC5.06□□□□□ -1.6
ACTN4O43707 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.06□□□□□ -1.6
ACTN4O43707 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ACTN4O43707 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
ACTN4O43707 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.06□□□□□ -1.6
ACTN4O43707 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.06□□□□□ -1.6
ACTN4O43707 SNORD115-30-201ENST00000364117 82 ntBASIC5.06□□□□□ -1.6
ACTN4O43707 SNORA68.2-201ENST00000391263 128 ntBASIC5.06□□□□□ -1.6
ACTN4O43707 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
ACTN4O43707 RNY4P30-201ENST00000410216 95 ntBASIC5.06□□□□□ -1.6
ACTN4O43707 RNU6-855P-201ENST00000410395 104 ntBASIC5.06□□□□□ -1.6
ACTN4O43707 RN7SKP284-201ENST00000411002 343 ntBASIC5.06□□□□□ -1.6
ACTN4O43707 AC245028.1-201ENST00000423259 256 ntBASIC5.06□□□□□ -1.6
ACTN4O43707 AC019205.3-201ENST00000424573 156 ntBASIC5.06□□□□□ -1.6
ACTN4O43707 Y_RNA.651-201ENST00000459380 103 ntBASIC5.06□□□□□ -1.6
ACTN4O43707 RN7SL41P-201ENST00000476144 297 ntBASIC5.06□□□□□ -1.6
ACTN4O43707 AC146944.2-203ENST00000502493 354 ntBASIC5.06□□□□□ -1.6
ACTN4O43707 AC139495.1-202ENST00000513164 354 ntBASIC5.06□□□□□ -1.6
ACTN4O43707 AC100770.1-201ENST00000532310 322 ntBASIC5.06□□□□□ -1.6
ACTN4O43707 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.06□□□□□ -1.6
ACTN4O43707 AC006199.1-201ENST00000548728 219 ntBASIC5.06□□□□□ -1.6
ACTN4O43707 AC133485.4-201ENST00000561835 220 ntBASIC5.06□□□□□ -1.6
ACTN4O43707 AC138907.4-201ENST00000570107 226 ntBASIC5.06□□□□□ -1.6
ACTN4O43707 MIR4724-201ENST00000579485 89 ntBASIC5.06□□□□□ -1.6
ACTN4O43707 MIR4436B2-201ENST00000581415 91 ntBASIC5.06□□□□□ -1.6
ACTN4O43707 MIR4436B1-201ENST00000583272 91 ntBASIC5.06□□□□□ -1.6
ACTN4O43707 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.06□□□□□ -1.6
ACTN4O43707 AC025946.2-201ENST00000603398 234 ntBASIC5.06□□□□□ -1.6
ACTN4O43707 SNRPGP20-201ENST00000604477 205 ntBASIC5.06□□□□□ -1.6
ACTN4O43707 MIR6134-201ENST00000617606 109 ntBASIC5.06□□□□□ -1.6
ACTN4O43707 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.06□□□□□ -1.6
ACTN4O43707 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
ACTN4O43707 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.06□□□□□ -1.6
ACTN4O43707 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ACTN4O43707 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
ACTN4O43707 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
ACTN4O43707 CENPCP1-201ENST00000533085 2578 ntBASIC5.05□□□□□ -1.6
ACTN4O43707 MIR367-201ENST00000362299 68 ntBASIC5.05□□□□□ -1.6
ACTN4O43707 RN7SKP224-201ENST00000364140 325 ntBASIC5.05□□□□□ -1.6
ACTN4O43707 Y_RNA.341-201ENST00000365341 102 ntBASIC5.05□□□□□ -1.6
ACTN4O43707 Y_RNA.368-201ENST00000365547 113 ntBASIC5.05□□□□□ -1.6
ACTN4O43707 Y_RNA.415-201ENST00000384012 112 ntBASIC5.05□□□□□ -1.6
ACTN4O43707 RNU1-44P-201ENST00000384453 163 ntBASIC5.05□□□□□ -1.6
ACTN4O43707 FTH1P15-201ENST00000406984 280 ntBASIC5.05□□□□□ -1.6
ACTN4O43707 AL591034.1-201ENST00000407447 340 ntBASIC5.05□□□□□ -1.6
ACTN4O43707 CYCSP49-201ENST00000420810 319 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms