Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 Y_RNA.638-201ENST00000459374 113 ntBASIC2□□□□□ -2.09
MSH4O15457 AC104564.1-201ENST00000493028 407 ntBASIC2□□□□□ -2.09
MSH4O15457 RNU6-548P-201ENST00000517083 115 ntBASIC2□□□□□ -2.09
MSH4O15457 AL138976.2-201ENST00000563989 694 ntBASIC2□□□□□ -2.09
MSH4O15457 MIR4419B-201ENST00000577260 68 ntBASIC2□□□□□ -2.09
MSH4O15457 AC073410.2-201ENST00000603240 332 ntBASIC2□□□□□ -2.09
MSH4O15457 Z94722.1-201ENST00000604328 474 ntBASIC2□□□□□ -2.09
MSH4O15457 AC064872.1-201ENST00000604823 1072 ntBASIC2□□□□□ -2.09
MSH4O15457 BNIP3P10-201ENST00000605360 577 ntBASIC2□□□□□ -2.09
MSH4O15457 MIR8081-201ENST00000611533 95 ntBASIC2□□□□□ -2.09
MSH4O15457 AC012640.5-201ENST00000623897 319 ntBASIC2□□□□□ -2.09
MSH4O15457 U6.114-201ENST00000636407 96 ntBASIC2□□□□□ -2.09
MSH4O15457 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
MSH4O15457 MTND5P17-201ENST00000418405 1603 ntBASIC1.99□□□□□ -2.09
MSH4O15457 OR4G2P-201ENST00000328113 903 ntBASIC1.99□□□□□ -2.09
MSH4O15457 SNORD116-20-201ENST00000384529 92 ntBASIC1.99□□□□□ -2.09
MSH4O15457 RNU6-482P-201ENST00000391068 107 ntBASIC1.99□□□□□ -2.09
MSH4O15457 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC1.99□□□□□ -2.09
MSH4O15457 AL358453.1-201ENST00000422522 250 ntBASIC1.99□□□□□ -2.09
MSH4O15457 HMGN2P38-201ENST00000423806 265 ntBASIC1.99□□□□□ -2.09
MSH4O15457 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC1.99□□□□□ -2.09
MSH4O15457 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC1.99□□□□□ -2.09
MSH4O15457 AL161788.1-201ENST00000441805 169 ntBASIC1.99□□□□□ -2.09
MSH4O15457 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.99□□□□□ -2.09
MSH4O15457 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC1.99□□□□□ -2.09
MSH4O15457 RNU1-86P-201ENST00000516108 154 ntBASIC1.99□□□□□ -2.09
MSH4O15457 RNU1-107P-201ENST00000516617 154 ntBASIC1.99□□□□□ -2.09
MSH4O15457 CR383656.8-201ENST00000549046 145 ntBASIC1.99□□□□□ -2.09
MSH4O15457 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC1.99□□□□□ -2.09
MSH4O15457 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC1.99□□□□□ -2.09
MSH4O15457 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.99□□□□□ -2.09
MSH4O15457 AL713866.2-201ENST00000603579 219 ntBASIC1.99□□□□□ -2.09
MSH4O15457 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.99□□□□□ -2.09
MSH4O15457 AC097520.1-201ENST00000624435 385 ntBASIC1.99□□□□□ -2.09
MSH4O15457 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.99□□□□□ -2.09
MSH4O15457 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
MSH4O15457 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
MSH4O15457 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.98□□□□□ -2.09
MSH4O15457 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
MSH4O15457 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.98□□□□□ -2.09
MSH4O15457 Y_RNA.201-201ENST00000364052 96 ntBASIC1.98□□□□□ -2.09
MSH4O15457 SNORA62.1-201ENST00000364287 154 ntBASIC1.98□□□□□ -2.09
MSH4O15457 RNU1-57P-201ENST00000384491 166 ntBASIC1.98□□□□□ -2.09
MSH4O15457 OR6C66P-201ENST00000414917 930 ntBASIC1.98□□□□□ -2.09
MSH4O15457 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC1.98□□□□□ -2.09
MSH4O15457 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC1.98□□□□□ -2.09
MSH4O15457 SRIP2-201ENST00000428470 166 ntBASIC1.98□□□□□ -2.09
MSH4O15457 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.98□□□□□ -2.09
MSH4O15457 AL365400.1-201ENST00000431854 640 ntBASIC1.98□□□□□ -2.09
MSH4O15457 AL645568.3-201ENST00000433683 316 ntBASIC1.98□□□□□ -2.09
MSH4O15457 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC1.98□□□□□ -2.09
MSH4O15457 IPO7P1-201ENST00000442031 636 ntBASIC1.98□□□□□ -2.09
MSH4O15457 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC1.98□□□□□ -2.09
MSH4O15457 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC1.98□□□□□ -2.09
MSH4O15457 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.98□□□□□ -2.09
MSH4O15457 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC1.98□□□□□ -2.09
MSH4O15457 RNU6-250P-201ENST00000516958 103 ntBASIC1.98□□□□□ -2.09
MSH4O15457 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.98□□□□□ -2.09
MSH4O15457 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC1.98□□□□□ -2.09
MSH4O15457 AC007375.1-201ENST00000554513 578 ntBASIC1.98□□□□□ -2.09
MSH4O15457 AL133368.2-201ENST00000556978 386 ntTSL 3 BASIC1.98□□□□□ -2.09
MSH4O15457 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC1.98□□□□□ -2.09
MSH4O15457 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.98□□□□□ -2.09
MSH4O15457 RPL30P11-203ENST00000598995 310 ntBASIC1.98□□□□□ -2.09
MSH4O15457 AC245014.2-201ENST00000603689 287 ntBASIC1.98□□□□□ -2.09
MSH4O15457 AC246785.4-201ENST00000605374 287 ntBASIC1.98□□□□□ -2.09
MSH4O15457 AL353997.5-201ENST00000618886 171 ntBASIC1.98□□□□□ -2.09
MSH4O15457 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC1.98□□□□□ -2.09
MSH4O15457 HAUS6P2-201ENST00000433254 2404 ntBASIC1.98□□□□□ -2.09
MSH4O15457 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC1.97□□□□□ -2.09
MSH4O15457 RNU6-1010P-201ENST00000362757 107 ntBASIC1.97□□□□□ -2.09
MSH4O15457 RNU6-1287P-201ENST00000362914 107 ntBASIC1.97□□□□□ -2.09
MSH4O15457 RNU6-487P-201ENST00000365430 104 ntBASIC1.97□□□□□ -2.09
MSH4O15457 RNU6-1032P-201ENST00000384100 107 ntBASIC1.97□□□□□ -2.09
MSH4O15457 RNU6-74P-201ENST00000384235 107 ntBASIC1.97□□□□□ -2.09
MSH4O15457 RNU6-1060P-201ENST00000384664 107 ntBASIC1.97□□□□□ -2.09
MSH4O15457 MIR186-201ENST00000384988 86 ntBASIC1.97□□□□□ -2.09
MSH4O15457 AL627390.1-201ENST00000396055 340 ntBASIC1.97□□□□□ -2.09
MSH4O15457 RNU6-248P-201ENST00000410720 107 ntBASIC1.97□□□□□ -2.09
MSH4O15457 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC1.97□□□□□ -2.09
MSH4O15457 BX295541.1-201ENST00000417774 250 ntBASIC1.97□□□□□ -2.09
MSH4O15457 AC008267.5-201ENST00000424928 265 ntBASIC1.97□□□□□ -2.09
MSH4O15457 HMGN2P19-201ENST00000425149 265 ntBASIC1.97□□□□□ -2.09
MSH4O15457 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC1.97□□□□□ -2.09
MSH4O15457 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.97□□□□□ -2.09
MSH4O15457 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.97□□□□□ -2.09
MSH4O15457 HMGB1P31-201ENST00000437242 427 ntBASIC1.97□□□□□ -2.09
MSH4O15457 AC009238.1-201ENST00000442165 424 ntBASIC1.97□□□□□ -2.09
MSH4O15457 AC009237.6-201ENST00000446969 424 ntBASIC1.97□□□□□ -2.09
MSH4O15457 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC1.97□□□□□ -2.09
MSH4O15457 AC006026.2-201ENST00000457376 180 ntBASIC1.97□□□□□ -2.09
MSH4O15457 AC091965.2-201ENST00000512324 613 ntBASIC1.97□□□□□ -2.09
MSH4O15457 RNU7-193P-201ENST00000516723 65 ntBASIC1.97□□□□□ -2.09
MSH4O15457 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.97□□□□□ -2.09
MSH4O15457 AP003072.2-201ENST00000527756 676 ntBASIC1.97□□□□□ -2.09
MSH4O15457 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.97□□□□□ -2.09
MSH4O15457 AC118273.2-201ENST00000532092 465 ntBASIC1.97□□□□□ -2.09
MSH4O15457 CYCSP26-201ENST00000534107 320 ntBASIC1.97□□□□□ -2.09
MSH4O15457 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC1.97□□□□□ -2.09
MSH4O15457 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms