Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC0.9□□□□□ -2.27
SDCBPO00560 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC0.9□□□□□ -2.27
SDCBPO00560 HMGN2P18-201ENST00000450680 270 ntBASIC0.9□□□□□ -2.27
SDCBPO00560 AC003071.1-201ENST00000451219 789 ntBASIC0.9□□□□□ -2.27
SDCBPO00560 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC0.9□□□□□ -2.27
SDCBPO00560 snoU13.9-201ENST00000458927 103 ntBASIC0.9□□□□□ -2.27
SDCBPO00560 RPL30P1-201ENST00000488676 339 ntBASIC0.9□□□□□ -2.27
SDCBPO00560 AC009646.1-201ENST00000510455 318 ntBASIC0.9□□□□□ -2.27
SDCBPO00560 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.9□□□□□ -2.27
SDCBPO00560 RNA5SP216-201ENST00000516111 123 ntBASIC0.9□□□□□ -2.27
SDCBPO00560 RNU6-677P-201ENST00000516914 101 ntBASIC0.9□□□□□ -2.27
SDCBPO00560 AC010376.1-201ENST00000522101 334 ntBASIC0.9□□□□□ -2.27
SDCBPO00560 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.9□□□□□ -2.27
SDCBPO00560 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC0.9□□□□□ -2.27
SDCBPO00560 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC0.9□□□□□ -2.27
SDCBPO00560 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.9□□□□□ -2.27
SDCBPO00560 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC0.9□□□□□ -2.27
SDCBPO00560 RRN3P3-201ENST00000549207 578 ntBASIC0.9□□□□□ -2.27
SDCBPO00560 SUB1P4-201ENST00000566062 339 ntBASIC0.9□□□□□ -2.27
SDCBPO00560 AC002400.1-201ENST00000569310 726 ntBASIC0.9□□□□□ -2.27
SDCBPO00560 MIR3146-201ENST00000580367 79 ntBASIC0.9□□□□□ -2.27
SDCBPO00560 KC877982.1-201ENST00000602313 470 ntBASIC0.9□□□□□ -2.27
SDCBPO00560 AL022154.1-201ENST00000604698 785 ntBASIC0.9□□□□□ -2.27
SDCBPO00560 AL590240.4-201ENST00000616908 390 ntBASIC0.9□□□□□ -2.27
SDCBPO00560 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
SDCBPO00560 CBX3P1-201ENST00000325243 554 ntBASIC0.89□□□□□ -2.27
SDCBPO00560 RNU6-212P-201ENST00000362642 104 ntBASIC0.89□□□□□ -2.27
SDCBPO00560 Y_RNA.99-201ENST00000363138 105 ntBASIC0.89□□□□□ -2.27
SDCBPO00560 SNORA4.1-201ENST00000364263 144 ntBASIC0.89□□□□□ -2.27
SDCBPO00560 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.89□□□□□ -2.27
SDCBPO00560 Y_RNA.465-201ENST00000384293 102 ntBASIC0.89□□□□□ -2.27
SDCBPO00560 FGF7P8-201ENST00000402994 292 ntBASIC0.89□□□□□ -2.27
SDCBPO00560 RNU4-22P-201ENST00000411058 166 ntBASIC0.89□□□□□ -2.27
SDCBPO00560 ELOCP17-201ENST00000414751 326 ntBASIC0.89□□□□□ -2.27
SDCBPO00560 ELOCP9-201ENST00000418624 239 ntBASIC0.89□□□□□ -2.27
SDCBPO00560 MRPL35P3-201ENST00000421557 364 ntBASIC0.89□□□□□ -2.27
SDCBPO00560 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC0.89□□□□□ -2.27
SDCBPO00560 AL035666.1-201ENST00000446195 348 ntBASIC0.89□□□□□ -2.27
SDCBPO00560 AC104982.1-201ENST00000478775 574 ntBASIC0.89□□□□□ -2.27
SDCBPO00560 AL163540.1-201ENST00000485382 386 ntBASIC0.89□□□□□ -2.27
SDCBPO00560 AC112206.3-201ENST00000514578 389 ntBASIC0.89□□□□□ -2.27
SDCBPO00560 RNA5SP458-201ENST00000516188 119 ntBASIC0.89□□□□□ -2.27
SDCBPO00560 Y_RNA.689-201ENST00000516589 107 ntBASIC0.89□□□□□ -2.27
SDCBPO00560 RNU6-1092P-201ENST00000516955 87 ntBASIC0.89□□□□□ -2.27
SDCBPO00560 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.89□□□□□ -2.27
SDCBPO00560 AC103810.9-201ENST00000606688 112 ntBASIC0.89□□□□□ -2.27
SDCBPO00560 AC080013.3-201ENST00000606839 578 ntBASIC0.89□□□□□ -2.27
SDCBPO00560 AC072039.2-201ENST00000608883 439 ntBASIC0.89□□□□□ -2.27
SDCBPO00560 AL159153.1-201ENST00000619688 317 ntBASIC0.89□□□□□ -2.27
SDCBPO00560 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.89□□□□□ -2.27
SDCBPO00560 AC068205.3-201ENST00000636385 468 ntBASIC0.89□□□□□ -2.27
SDCBPO00560 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC0.89□□□□□ -2.27
SDCBPO00560 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.89□□□□□ -2.27
SDCBPO00560 Y_RNA.46-201ENST00000362695 102 ntBASIC0.88□□□□□ -2.27
SDCBPO00560 RNU6-23P-201ENST00000363283 107 ntBASIC0.88□□□□□ -2.27
SDCBPO00560 MIR10A-201ENST00000385043 110 ntBASIC0.88□□□□□ -2.27
SDCBPO00560 Y_RNA.597-201ENST00000410463 100 ntBASIC0.88□□□□□ -2.27
SDCBPO00560 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.88□□□□□ -2.27
SDCBPO00560 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.88□□□□□ -2.27
SDCBPO00560 AL031779.1-201ENST00000415663 330 ntBASIC0.88□□□□□ -2.27
SDCBPO00560 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC0.88□□□□□ -2.27
SDCBPO00560 RPS3AP37-201ENST00000419176 745 ntBASIC0.88□□□□□ -2.27
SDCBPO00560 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC0.88□□□□□ -2.27
SDCBPO00560 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC0.88□□□□□ -2.27
SDCBPO00560 RPS15AP10-201ENST00000432472 382 ntBASIC0.88□□□□□ -2.27
SDCBPO00560 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.88□□□□□ -2.27
SDCBPO00560 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.88□□□□□ -2.27
SDCBPO00560 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.88□□□□□ -2.27
SDCBPO00560 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC0.88□□□□□ -2.27
SDCBPO00560 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC0.88□□□□□ -2.27
SDCBPO00560 RPL23AP35-201ENST00000451906 501 ntBASIC0.88□□□□□ -2.27
SDCBPO00560 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.88□□□□□ -2.27
SDCBPO00560 DUXAP8-207ENST00000456786 622 ntBASIC0.88□□□□□ -2.27
SDCBPO00560 RPL30P12-201ENST00000474666 353 ntBASIC0.88□□□□□ -2.27
SDCBPO00560 AC087343.1-201ENST00000477341 475 ntBASIC0.88□□□□□ -2.27
SDCBPO00560 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC0.88□□□□□ -2.27
SDCBPO00560 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.88□□□□□ -2.27
SDCBPO00560 Y_RNA.687-201ENST00000516558 91 ntBASIC0.88□□□□□ -2.27
SDCBPO00560 RNU6-902P-201ENST00000517212 91 ntBASIC0.88□□□□□ -2.27
SDCBPO00560 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC0.88□□□□□ -2.27
SDCBPO00560 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC0.88□□□□□ -2.27
SDCBPO00560 AP003122.4-201ENST00000530980 758 ntBASIC0.88□□□□□ -2.27
SDCBPO00560 AC023050.2-201ENST00000544968 387 ntBASIC0.88□□□□□ -2.27
SDCBPO00560 AC123904.2-201ENST00000548059 300 ntBASIC0.88□□□□□ -2.27
SDCBPO00560 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.88□□□□□ -2.27
SDCBPO00560 MTND4LP25-201ENST00000570218 163 ntBASIC0.88□□□□□ -2.27
SDCBPO00560 SNORA77B-201ENST00000578179 125 ntBASIC0.88□□□□□ -2.27
SDCBPO00560 SNORD114-21-201ENST00000606412 72 ntBASIC0.88□□□□□ -2.27
SDCBPO00560 RNU6-88P-201ENST00000606801 100 ntBASIC0.88□□□□□ -2.27
SDCBPO00560 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC0.88□□□□□ -2.27
SDCBPO00560 AC024940.5-201ENST00000622889 474 ntBASIC0.88□□□□□ -2.27
SDCBPO00560 AP002782.1-201ENST00000623107 614 ntBASIC0.88□□□□□ -2.27
SDCBPO00560 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC0.88□□□□□ -2.27
SDCBPO00560 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC0.88□□□□□ -2.27
SDCBPO00560 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
SDCBPO00560 RNU6-384P-201ENST00000364900 104 ntBASIC0.87□□□□□ -2.27
SDCBPO00560 SNORA22-201ENST00000383907 134 ntBASIC0.87□□□□□ -2.27
SDCBPO00560 RNU6-190P-201ENST00000384154 102 ntBASIC0.87□□□□□ -2.27
SDCBPO00560 SNORA22C-201ENST00000384614 134 ntBASIC0.87□□□□□ -2.27
SDCBPO00560 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms