Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.12□□□□□ -2.07
NPIPA2E9PIF3 AC105137.2-201ENST00000569073 466 ntBASIC2.12□□□□□ -2.07
NPIPA2E9PIF3 MTATP6P3-201ENST00000581686 676 ntBASIC2.12□□□□□ -2.07
NPIPA2E9PIF3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.12□□□□□ -2.07
NPIPA2E9PIF3 AL391646.1-201ENST00000603860 190 ntBASIC2.12□□□□□ -2.07
NPIPA2E9PIF3 AL355297.2-201ENST00000604792 129 ntBASIC2.12□□□□□ -2.07
NPIPA2E9PIF3 AC021646.1-201ENST00000605469 484 ntBASIC2.12□□□□□ -2.07
NPIPA2E9PIF3 AC067747.1-201ENST00000608026 250 ntBASIC2.12□□□□□ -2.07
NPIPA2E9PIF3 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.12□□□□□ -2.07
NPIPA2E9PIF3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.12□□□□□ -2.07
NPIPA2E9PIF3 MIR6873-201ENST00000622788 63 ntBASIC2.12□□□□□ -2.07
NPIPA2E9PIF3 MIR3529-201ENST00000637713 78 ntBASIC2.12□□□□□ -2.07
NPIPA2E9PIF3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
NPIPA2E9PIF3 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.11□□□□□ -2.07
NPIPA2E9PIF3 OR4G2P-201ENST00000328113 903 ntBASIC2.11□□□□□ -2.07
NPIPA2E9PIF3 RNU1-72P-201ENST00000362976 153 ntBASIC2.11□□□□□ -2.07
NPIPA2E9PIF3 SNORD114-19-201ENST00000363072 75 ntBASIC2.11□□□□□ -2.07
NPIPA2E9PIF3 RNU1-148P-201ENST00000384472 162 ntBASIC2.11□□□□□ -2.07
NPIPA2E9PIF3 RNU6-606P-201ENST00000384721 111 ntBASIC2.11□□□□□ -2.07
NPIPA2E9PIF3 SNORD70.1-201ENST00000391007 85 ntBASIC2.11□□□□□ -2.07
NPIPA2E9PIF3 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.11□□□□□ -2.07
NPIPA2E9PIF3 RNU4-46P-201ENST00000410818 138 ntBASIC2.11□□□□□ -2.07
NPIPA2E9PIF3 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.11□□□□□ -2.07
NPIPA2E9PIF3 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.11□□□□□ -2.07
NPIPA2E9PIF3 DPH3P2-201ENST00000422618 250 ntBASIC2.11□□□□□ -2.07
NPIPA2E9PIF3 MTCYBP8-201ENST00000422855 651 ntBASIC2.11□□□□□ -2.07
NPIPA2E9PIF3 MTATP6P26-201ENST00000445926 662 ntBASIC2.11□□□□□ -2.07
NPIPA2E9PIF3 RPS27P21-201ENST00000486977 252 ntBASIC2.11□□□□□ -2.07
NPIPA2E9PIF3 AP003392.2-201ENST00000527269 208 ntBASIC2.11□□□□□ -2.07
NPIPA2E9PIF3 CR383656.8-201ENST00000549046 145 ntBASIC2.11□□□□□ -2.07
NPIPA2E9PIF3 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.11□□□□□ -2.07
NPIPA2E9PIF3 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.11□□□□□ -2.07
NPIPA2E9PIF3 MIR4648-201ENST00000580107 72 ntBASIC2.11□□□□□ -2.07
NPIPA2E9PIF3 NBR2-204ENST00000587322 63 ntBASIC2.11□□□□□ -2.07
NPIPA2E9PIF3 SCARNA4-202ENST00000625402 129 ntBASIC2.11□□□□□ -2.07
NPIPA2E9PIF3 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.11□□□□□ -2.07
NPIPA2E9PIF3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
NPIPA2E9PIF3 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 RNU6-843P-201ENST00000384454 104 ntBASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 RNU6-393P-201ENST00000384475 107 ntBASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 Y_RNA.582-201ENST00000391023 95 ntBASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 USP9YP14-201ENST00000430663 563 ntBASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 AL161788.1-201ENST00000441805 169 ntBASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 Z83846.1-201ENST00000446798 265 ntBASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 SCARNA18-201ENST00000459004 134 ntBASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 snoU13.26-201ENST00000459452 105 ntBASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 MTCO3P7-201ENST00000510008 774 ntBASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 AC107222.1-201ENST00000510899 637 ntBASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 SNORA31.23-201ENST00000517219 133 ntBASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 AP005435.4-201ENST00000529514 284 ntBASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 AC118273.2-201ENST00000532092 465 ntBASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 AC136619.2-201ENST00000563361 631 ntBASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 AL121917.1-203ENST00000605534 577 ntBASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 RMST_4.1-201ENST00000616886 107 ntBASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 HAUS6P2-201ENST00000433254 2404 ntBASIC2.1□□□□□ -2.07
NPIPA2E9PIF3 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 Y_RNA.1-201ENST00000352915 104 ntBASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 RNU6-37P-201ENST00000362692 107 ntBASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 SNORD56.1-201ENST00000362913 68 ntBASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 RNU6-11P-201ENST00000364234 107 ntBASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 Y_RNA.324-201ENST00000365165 102 ntBASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 RNU1-51P-201ENST00000365345 176 ntBASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 RNU6-487P-201ENST00000365430 104 ntBASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 RNU6-25P-201ENST00000383873 107 ntBASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 RNU6-1-201ENST00000383898 107 ntBASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 RNU6-1032P-201ENST00000384100 107 ntBASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 RNU5A-6P-201ENST00000384136 116 ntBASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 RNU6-48P-201ENST00000384161 107 ntBASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 RNU6-36P-201ENST00000384172 107 ntBASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 RNU6-4P-201ENST00000384205 107 ntBASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 RNU6-5P-201ENST00000384238 107 ntBASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 RNU6-3P-201ENST00000384314 107 ntBASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 RNU6-16P-201ENST00000384385 107 ntBASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 RNU6-15P-201ENST00000384534 107 ntBASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 RNU6-2-201ENST00000384627 107 ntBASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 RNU6-29P-201ENST00000384637 107 ntBASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 RNU6-9-201ENST00000384776 107 ntBASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 RNU6-33P-201ENST00000384793 107 ntBASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 RAP1BP3-201ENST00000407180 549 ntBASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 BTF3L4P1-201ENST00000413813 468 ntBASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 AC074117.2-201ENST00000417130 397 ntBASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 AL353193.1-201ENST00000421444 268 ntBASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 MTCO2P19-201ENST00000427513 598 ntBASIC2.09□□□□□ -2.07
NPIPA2E9PIF3 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.09□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms