Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.36□□□□□ -1.71
RNF223E7ERA6 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RNF223E7ERA6 AC022254.1-201ENST00000567857 235 ntBASIC4.36□□□□□ -1.71
RNF223E7ERA6 AC024220.1-201ENST00000603675 484 ntBASIC4.36□□□□□ -1.71
RNF223E7ERA6 MIR3199-2-201ENST00000636243 86 ntBASIC4.36□□□□□ -1.71
RNF223E7ERA6 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF223E7ERA6 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.36□□□□□ -1.71
RNF223E7ERA6 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
RNF223E7ERA6 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RNF223E7ERA6 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
RNF223E7ERA6 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF223E7ERA6 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF223E7ERA6 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
RNF223E7ERA6 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
RNF223E7ERA6 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
RNF223E7ERA6 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC4.35□□□□□ -1.71
RNF223E7ERA6 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.35□□□□□ -1.71
RNF223E7ERA6 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
RNF223E7ERA6 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.35□□□□□ -1.71
RNF223E7ERA6 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.35□□□□□ -1.71
RNF223E7ERA6 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF223E7ERA6 AC068254.2-201ENST00000623938 3577 ntBASIC4.35□□□□□ -1.71
RNF223E7ERA6 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF223E7ERA6 RNU1-32P-201ENST00000363937 159 ntBASIC4.35□□□□□ -1.71
RNF223E7ERA6 RNU6-117P-201ENST00000365415 107 ntBASIC4.35□□□□□ -1.71
RNF223E7ERA6 AL133475.1-201ENST00000404414 305 ntBASIC4.35□□□□□ -1.71
RNF223E7ERA6 AL031121.1-201ENST00000406553 254 ntBASIC4.35□□□□□ -1.71
RNF223E7ERA6 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.35□□□□□ -1.71
RNF223E7ERA6 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC4.35□□□□□ -1.71
RNF223E7ERA6 AC011753.3-201ENST00000443436 406 ntBASIC4.35□□□□□ -1.71
RNF223E7ERA6 RPL23AP67-201ENST00000465341 474 ntBASIC4.35□□□□□ -1.71
RNF223E7ERA6 RN7SL188P-201ENST00000469842 285 ntBASIC4.35□□□□□ -1.71
RNF223E7ERA6 AC140172.1-201ENST00000502928 141 ntBASIC4.35□□□□□ -1.71
RNF223E7ERA6 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.35□□□□□ -1.71
RNF223E7ERA6 RNU6-91P-201ENST00000607774 107 ntBASIC4.35□□□□□ -1.71
RNF223E7ERA6 AL162726.3-218ENST00000636401 95 ntBASIC4.35□□□□□ -1.71
RNF223E7ERA6 MIR4662A-201ENST00000637499 67 ntBASIC4.35□□□□□ -1.71
RNF223E7ERA6 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RNF223E7ERA6 AC058791.1-201ENST00000608412 3198 ntBASIC4.35□□□□□ -1.71
RNF223E7ERA6 STX3-208ENST00000641815 3236 ntBASIC4.35□□□□□ -1.71
RNF223E7ERA6 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RNF223E7ERA6 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
RNF223E7ERA6 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RNF223E7ERA6 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC4.35□□□□□ -1.71
RNF223E7ERA6 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
RNF223E7ERA6 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RNF223E7ERA6 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RNF223E7ERA6 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.35□□□□□ -1.71
RNF223E7ERA6 FAM35BP-202ENST00000497389 3337 ntBASIC4.34□□□□□ -1.71
RNF223E7ERA6 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RNF223E7ERA6 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC4.34□□□□□ -1.71
RNF223E7ERA6 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
RNF223E7ERA6 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
RNF223E7ERA6 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RNF223E7ERA6 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.34□□□□□ -1.71
RNF223E7ERA6 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
RNF223E7ERA6 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RNF223E7ERA6 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RNF223E7ERA6 RNA5SP453-201ENST00000362503 119 ntBASIC4.34□□□□□ -1.71
RNF223E7ERA6 MIR548D2-201ENST00000384955 97 ntBASIC4.34□□□□□ -1.71
RNF223E7ERA6 MT-TI-201ENST00000387365 69 ntBASIC4.34□□□□□ -1.71
RNF223E7ERA6 RPS16P5-201ENST00000406501 404 ntBASIC4.34□□□□□ -1.71
RNF223E7ERA6 RNU7-57P-201ENST00000459540 60 ntBASIC4.34□□□□□ -1.71
RNF223E7ERA6 RN7SL244P-201ENST00000493405 297 ntBASIC4.34□□□□□ -1.71
RNF223E7ERA6 MIR4666B-201ENST00000578142 81 ntBASIC4.34□□□□□ -1.71
RNF223E7ERA6 AC060780.2-201ENST00000589047 198 ntBASIC4.34□□□□□ -1.71
RNF223E7ERA6 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RNF223E7ERA6 MIR6715B-201ENST00000637172 77 ntBASIC4.34□□□□□ -1.71
RNF223E7ERA6 Z95114.1-201ENST00000624264 14574 ntBASIC4.34□□□□□ -1.71
RNF223E7ERA6 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.34□□□□□ -1.71
RNF223E7ERA6 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RNF223E7ERA6 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
RNF223E7ERA6 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.72
RNF223E7ERA6 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
RNF223E7ERA6 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
RNF223E7ERA6 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
RNF223E7ERA6 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
RNF223E7ERA6 AC009962.1-201ENST00000567327 3813 ntBASIC4.34□□□□□ -1.72
RNF223E7ERA6 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
RNF223E7ERA6 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC4.34□□□□□ -1.72
RNF223E7ERA6 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF223E7ERA6 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.33□□□□□ -1.72
RNF223E7ERA6 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF223E7ERA6 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RNF223E7ERA6 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
RNF223E7ERA6 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RNF223E7ERA6 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.33□□□□□ -1.72
RNF223E7ERA6 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF223E7ERA6 AC026241.1-201ENST00000517873 2142 ntBASIC4.33□□□□□ -1.72
RNF223E7ERA6 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
RNF223E7ERA6 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF223E7ERA6 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RNF223E7ERA6 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF223E7ERA6 RNU6-675P-201ENST00000384236 104 ntBASIC4.33□□□□□ -1.72
RNF223E7ERA6 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RNF223E7ERA6 RPL21P3-201ENST00000395517 478 ntBASIC4.33□□□□□ -1.72
RNF223E7ERA6 MIR1182-201ENST00000408363 97 ntBASIC4.33□□□□□ -1.72
RNF223E7ERA6 RPL39P25-201ENST00000449384 154 ntBASIC4.33□□□□□ -1.72
RNF223E7ERA6 AC027419.1-201ENST00000522976 328 ntBASIC4.33□□□□□ -1.72
RNF223E7ERA6 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms