Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 RNU6-1210P-201ENST00000363775 107 ntBASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 SNORD114-24-201ENST00000365029 72 ntBASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 RNU6ATAC3P-201ENST00000387974 126 ntBASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 RNU6-733P-201ENST00000410759 104 ntBASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 RPS27AP8-201ENST00000452665 445 ntBASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 RNU6-333P-201ENST00000459117 107 ntBASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 RAP1BP2-201ENST00000478270 544 ntBASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 PDCD5P2-201ENST00000507570 312 ntBASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 SNORA31.3-201ENST00000516029 96 ntBASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 RNU6-572P-201ENST00000516724 80 ntBASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 RNA5SP437-201ENST00000517249 129 ntBASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 ZKSCAN7P1-201ENST00000543668 673 ntBASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 AC137800.2-201ENST00000574375 120 ntBASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 AC126365.2-201ENST00000580630 379 ntBASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 AC008751.2-201ENST00000597885 980 ntBASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 AC105129.3-201ENST00000605455 485 ntBASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 MIR6504-201ENST00000613520 61 ntBASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 MIR8070-201ENST00000616510 88 ntBASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 AC010975.3-201ENST00000618727 978 ntBASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 AL359740.1-201ENST00000624340 592 ntBASIC0.37□□□□□ -2.35
TRAV12-3A0A0B4J271 Y_RNA.164-201ENST00000363709 102 ntBASIC0.36□□□□□ -2.35
TRAV12-3A0A0B4J271 RNU6-843P-201ENST00000384454 104 ntBASIC0.36□□□□□ -2.35
TRAV12-3A0A0B4J271 AL117342.1-201ENST00000404861 406 ntBASIC0.36□□□□□ -2.35
TRAV12-3A0A0B4J271 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAV12-3A0A0B4J271 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC0.36□□□□□ -2.35
TRAV12-3A0A0B4J271 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC0.36□□□□□ -2.35
TRAV12-3A0A0B4J271 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAV12-3A0A0B4J271 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAV12-3A0A0B4J271 MED28P2-201ENST00000475771 317 ntBASIC0.36□□□□□ -2.35
TRAV12-3A0A0B4J271 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAV12-3A0A0B4J271 RNU6-229P-201ENST00000516614 102 ntBASIC0.36□□□□□ -2.35
TRAV12-3A0A0B4J271 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAV12-3A0A0B4J271 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC0.36□□□□□ -2.35
TRAV12-3A0A0B4J271 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC0.36□□□□□ -2.35
TRAV12-3A0A0B4J271 HMGB1P33-201ENST00000563485 527 ntBASIC0.36□□□□□ -2.35
TRAV12-3A0A0B4J271 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC0.36□□□□□ -2.35
TRAV12-3A0A0B4J271 AC130324.3-201ENST00000614165 542 ntBASIC0.36□□□□□ -2.35
TRAV12-3A0A0B4J271 AC120349.2-201ENST00000625002 298 ntBASIC0.36□□□□□ -2.35
TRAV12-3A0A0B4J271 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.36□□□□□ -2.35
TRAV12-3A0A0B4J271 LINC02555-201ENST00000563933 1951 ntBASIC0.36□□□□□ -2.35
TRAV12-3A0A0B4J271 MTND4P16-201ENST00000466108 1367 ntBASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 Y_RNA.40-201ENST00000362645 93 ntBASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 SNORD18A-201ENST00000363753 72 ntBASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 RNU6-487P-201ENST00000365430 104 ntBASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 MIR548J-201ENST00000408833 112 ntBASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 RPS26P5-201ENST00000418544 335 ntBASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 AC083875.1-201ENST00000419509 405 ntBASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 CBX3P6-201ENST00000430257 527 ntBASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 GTF2IP13-201ENST00000438487 386 ntBASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 snoU13.14-201ENST00000459372 104 ntBASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 SNORD124-201ENST00000459577 104 ntBASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 RPS27P22-201ENST00000478056 241 ntBASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 AC097473.1-201ENST00000508142 408 ntBASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 SNORA70.22-201ENST00000517160 124 ntBASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 MIR4452-201ENST00000583004 71 ntBASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 AP002906.1-201ENST00000603405 233 ntBASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 AC243773.3-201ENST00000613270 256 ntBASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 AC068647.2-201ENST00000637380 353 ntBASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 MIR3529-201ENST00000637713 78 ntBASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 AC068700.1-201ENST00000565862 3754 ntBASIC0.35□□□□□ -2.35
TRAV12-3A0A0B4J271 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.35
TRAV12-3A0A0B4J271 SNORA25.9-201ENST00000365087 128 ntBASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 MIR605-201ENST00000385078 83 ntBASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 MTCO1P56-201ENST00000401674 224 ntBASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 RPL21P24-201ENST00000413752 448 ntBASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 AC114737.2-201ENST00000421583 173 ntBASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 MTCYBP15-201ENST00000433123 1127 ntBASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.34□□□□□ -2.36
TRAV12-3A0A0B4J271 TAF9P1-201ENST00000445421 515 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms