Protein–RNA interactions for Protein: A0A0B4J268

TRAV4, T-cell receptor alpha variable 4 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4A0A0B4J268 KATNBL1P3-201ENST00000443475 909 ntBASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 MTCO2P25-201ENST00000447065 681 ntBASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 RNU1-131P-201ENST00000458943 161 ntBASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 AC093852.1-201ENST00000503587 266 ntBASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 SUMO2P5-201ENST00000506790 245 ntBASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 UBL5P1-201ENST00000507979 193 ntBASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 RNU6-914P-201ENST00000516749 109 ntBASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 HMGB1P33-201ENST00000563485 527 ntBASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 AC099785.1-201ENST00000605697 437 ntBASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 RMST_4.1-201ENST00000616886 107 ntBASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 AL589994.2-201ENST00000621124 579 ntBASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 MTND5P35-201ENST00000557537 1720 ntBASIC0.77□□□□□ -2.29
TRAV4A0A0B4J268 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 LINC02555-201ENST00000563933 1951 ntBASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 RNU1-22P-201ENST00000363334 158 ntBASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 RNU6-968P-201ENST00000384076 107 ntBASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 Y_RNA.578-201ENST00000390903 88 ntBASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 RPL23AP32-201ENST00000395315 459 ntBASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 FCF1P10-201ENST00000407590 479 ntBASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 MIR1305-201ENST00000408300 86 ntBASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 RPL23AP36-201ENST00000413895 458 ntBASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 AL161935.2-201ENST00000414627 60 ntBASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 AC013262.1-201ENST00000426710 252 ntBASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 MTND4P15-201ENST00000437913 1033 ntBASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 EEF1E1P1-201ENST00000446998 430 ntBASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 OR2AQ1P-201ENST00000451972 200 ntBASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 AL163195.1-201ENST00000496941 348 ntBASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 CENPUP1-201ENST00000526649 1202 ntBASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 AC103810.9-201ENST00000606688 112 ntBASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 AC022893.3-201ENST00000607665 437 ntBASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 AC092574.1-201ENST00000609771 420 ntBASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 AL365204.3-201ENST00000612448 685 ntBASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 AC022513.1-201ENST00000624512 117 ntBASIC0.76□□□□□ -2.29
TRAV4A0A0B4J268 RNU5A-8P-201ENST00000364102 114 ntBASIC0.75□□□□□ -2.29
TRAV4A0A0B4J268 SNORD116-20-201ENST00000384529 92 ntBASIC0.75□□□□□ -2.29
TRAV4A0A0B4J268 MIR520A-201ENST00000384862 85 ntBASIC0.75□□□□□ -2.29
TRAV4A0A0B4J268 MIR513A1-201ENST00000385138 129 ntBASIC0.75□□□□□ -2.29
TRAV4A0A0B4J268 AC069282.1-201ENST00000411911 526 ntBASIC0.75□□□□□ -2.29
TRAV4A0A0B4J268 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV4A0A0B4J268 AL583843.1-201ENST00000456070 346 ntBASIC0.75□□□□□ -2.29
TRAV4A0A0B4J268 SNRPFP4-201ENST00000456366 242 ntBASIC0.75□□□□□ -2.29
TRAV4A0A0B4J268 AL139824.2-201ENST00000458731 1095 ntBASIC0.75□□□□□ -2.29
TRAV4A0A0B4J268 RPL39P28-201ENST00000465655 155 ntBASIC0.75□□□□□ -2.29
TRAV4A0A0B4J268 AC087343.1-201ENST00000477341 475 ntBASIC0.75□□□□□ -2.29
TRAV4A0A0B4J268 AL163540.1-201ENST00000485382 386 ntBASIC0.75□□□□□ -2.29
TRAV4A0A0B4J268 RPS23P4-201ENST00000487908 423 ntBASIC0.75□□□□□ -2.29
TRAV4A0A0B4J268 SNORA3.4-201ENST00000515969 96 ntBASIC0.75□□□□□ -2.29
TRAV4A0A0B4J268 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.75□□□□□ -2.29
TRAV4A0A0B4J268 OR8K2P-201ENST00000524645 927 ntBASIC0.75□□□□□ -2.29
TRAV4A0A0B4J268 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV4A0A0B4J268 AC006270.3-201ENST00000605967 1036 ntBASIC0.75□□□□□ -2.29
TRAV4A0A0B4J268 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC0.75□□□□□ -2.29
TRAV4A0A0B4J268 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC0.75□□□□□ -2.29
TRAV4A0A0B4J268 AL163152.1-201ENST00000642001 374 ntBASIC0.75□□□□□ -2.29
TRAV4A0A0B4J268 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
TRAV4A0A0B4J268 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 AL589826.1-201ENST00000340697 249 ntBASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 SNORD3E-201ENST00000362899 217 ntBASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 RNU1-124P-201ENST00000363861 145 ntBASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 RNU6-72P-201ENST00000384285 79 ntBASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 SNRPEP10-201ENST00000420249 274 ntBASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 AL365400.1-201ENST00000431854 640 ntBASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 MTCO1P27-201ENST00000448269 226 ntBASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 AC132479.1-201ENST00000449160 144 ntBASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 RPS27AP8-201ENST00000452665 445 ntBASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 snoU109.2-201ENST00000459316 135 ntBASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 AC114982.1-201ENST00000469402 321 ntBASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 RPL30P12-201ENST00000474666 353 ntBASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 AC097473.1-201ENST00000508142 408 ntBASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 AC009646.1-201ENST00000510455 318 ntBASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 RNU6-677P-201ENST00000516914 101 ntBASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 AC136932.1-201ENST00000574771 208 ntBASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 MIR4298-201ENST00000584380 73 ntBASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 AL391646.1-201ENST00000603860 190 ntBASIC0.74□□□□□ -2.29
TRAV4A0A0B4J268 BNIP3P31-201ENST00000604515 566 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms