Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 SNORD116-20-201ENST00000384529 92 ntBASIC1.35□□□□□ -2.19
USH1CQ9Y6N9 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
USH1CQ9Y6N9 SNORA67.6-201ENST00000391093 99 ntBASIC1.35□□□□□ -2.19
USH1CQ9Y6N9 CBX3P9-201ENST00000402326 552 ntBASIC1.35□□□□□ -2.19
USH1CQ9Y6N9 RPL23AP36-201ENST00000413895 458 ntBASIC1.35□□□□□ -2.19
USH1CQ9Y6N9 MTCO3P5-201ENST00000433620 714 ntBASIC1.35□□□□□ -2.19
USH1CQ9Y6N9 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.35□□□□□ -2.19
USH1CQ9Y6N9 SNORA31.24-201ENST00000517232 57 ntBASIC1.35□□□□□ -2.19
USH1CQ9Y6N9 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.35□□□□□ -2.19
USH1CQ9Y6N9 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.35□□□□□ -2.19
USH1CQ9Y6N9 AC123904.2-201ENST00000548059 300 ntBASIC1.35□□□□□ -2.19
USH1CQ9Y6N9 MIR4498-201ENST00000577599 66 ntBASIC1.35□□□□□ -2.19
USH1CQ9Y6N9 AP001004.1-201ENST00000582468 324 ntBASIC1.35□□□□□ -2.19
USH1CQ9Y6N9 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.35□□□□□ -2.19
USH1CQ9Y6N9 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.35□□□□□ -2.19
USH1CQ9Y6N9 MIR412-201ENST00000362142 91 ntBASIC1.34□□□□□ -2.19
USH1CQ9Y6N9 RNY4P24-201ENST00000362735 96 ntBASIC1.34□□□□□ -2.19
USH1CQ9Y6N9 RNU6-457P-201ENST00000363999 107 ntBASIC1.34□□□□□ -2.19
USH1CQ9Y6N9 MIR150-201ENST00000385048 84 ntBASIC1.34□□□□□ -2.19
USH1CQ9Y6N9 SNORA17.3-201ENST00000391159 129 ntBASIC1.34□□□□□ -2.19
USH1CQ9Y6N9 FGF7P8-201ENST00000402994 292 ntBASIC1.34□□□□□ -2.19
USH1CQ9Y6N9 RNU2-23P-201ENST00000410545 195 ntBASIC1.34□□□□□ -2.19
USH1CQ9Y6N9 USP9YP18-201ENST00000425912 695 ntBASIC1.34□□□□□ -2.19
USH1CQ9Y6N9 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC1.34□□□□□ -2.19
USH1CQ9Y6N9 AL627311.1-201ENST00000431514 115 ntBASIC1.34□□□□□ -2.19
USH1CQ9Y6N9 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC1.34□□□□□ -2.19
USH1CQ9Y6N9 AP001025.1-201ENST00000486139 332 ntBASIC1.34□□□□□ -2.19
USH1CQ9Y6N9 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC1.34□□□□□ -2.19
USH1CQ9Y6N9 RN7SKP256-201ENST00000517201 314 ntBASIC1.34□□□□□ -2.19
USH1CQ9Y6N9 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC1.34□□□□□ -2.19
USH1CQ9Y6N9 MTATP6P15-201ENST00000527233 835 ntBASIC1.34□□□□□ -2.19
USH1CQ9Y6N9 AC021755.4-201ENST00000616620 456 ntBASIC1.34□□□□□ -2.19
USH1CQ9Y6N9 MTND4P16-201ENST00000466108 1367 ntBASIC1.34□□□□□ -2.2
USH1CQ9Y6N9 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
USH1CQ9Y6N9 snoU2_19.1-201ENST00000362361 80 ntBASIC1.33□□□□□ -2.2
USH1CQ9Y6N9 RNY4P16-201ENST00000364768 94 ntBASIC1.33□□□□□ -2.2
USH1CQ9Y6N9 RNU6-338P-201ENST00000383888 105 ntBASIC1.33□□□□□ -2.2
USH1CQ9Y6N9 MIR10A-201ENST00000385043 110 ntBASIC1.33□□□□□ -2.2
USH1CQ9Y6N9 RNU6-757P-201ENST00000410334 100 ntBASIC1.33□□□□□ -2.2
USH1CQ9Y6N9 RPL23AP30-201ENST00000432419 501 ntBASIC1.33□□□□□ -2.2
USH1CQ9Y6N9 AL008629.1-201ENST00000438615 184 ntBASIC1.33□□□□□ -2.2
USH1CQ9Y6N9 CALM1P1-201ENST00000442082 433 ntBASIC1.33□□□□□ -2.2
USH1CQ9Y6N9 PTENP1-201ENST00000447117 1215 ntBASIC1.33□□□□□ -2.2
USH1CQ9Y6N9 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC1.33□□□□□ -2.2
USH1CQ9Y6N9 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC1.33□□□□□ -2.2
USH1CQ9Y6N9 RNU2-10P-201ENST00000516375 211 ntBASIC1.33□□□□□ -2.2
USH1CQ9Y6N9 Y_RNA.676-201ENST00000516393 96 ntBASIC1.33□□□□□ -2.2
USH1CQ9Y6N9 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.33□□□□□ -2.2
USH1CQ9Y6N9 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
USH1CQ9Y6N9 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC1.33□□□□□ -2.2
USH1CQ9Y6N9 AC015720.1-201ENST00000565251 277 ntBASIC1.33□□□□□ -2.2
USH1CQ9Y6N9 MIR4307-201ENST00000582802 84 ntBASIC1.33□□□□□ -2.2
USH1CQ9Y6N9 AC023043.2-201ENST00000589678 1026 ntBASIC1.33□□□□□ -2.2
USH1CQ9Y6N9 WISP1-OT1-201ENST00000602893 642 ntBASIC1.33□□□□□ -2.2
USH1CQ9Y6N9 AL022154.1-201ENST00000604698 785 ntBASIC1.33□□□□□ -2.2
USH1CQ9Y6N9 snoU13.31-201ENST00000607291 104 ntBASIC1.33□□□□□ -2.2
USH1CQ9Y6N9 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC1.33□□□□□ -2.2
USH1CQ9Y6N9 AC097478.2-201ENST00000610572 514 ntBASIC1.33□□□□□ -2.2
USH1CQ9Y6N9 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.33□□□□□ -2.2
USH1CQ9Y6N9 AP000484.1-201ENST00000620067 1252 ntBASIC1.33□□□□□ -2.2
USH1CQ9Y6N9 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
USH1CQ9Y6N9 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
USH1CQ9Y6N9 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.32□□□□□ -2.2
USH1CQ9Y6N9 AL161722.3-201ENST00000605789 2983 ntBASIC1.32□□□□□ -2.2
USH1CQ9Y6N9 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
USH1CQ9Y6N9 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.32□□□□□ -2.2
USH1CQ9Y6N9 RNU4-92P-201ENST00000363783 136 ntBASIC1.32□□□□□ -2.2
USH1CQ9Y6N9 RNU6-960P-201ENST00000364056 120 ntBASIC1.32□□□□□ -2.2
USH1CQ9Y6N9 RNU6-60P-201ENST00000364792 103 ntBASIC1.32□□□□□ -2.2
USH1CQ9Y6N9 U8.10-201ENST00000384260 133 ntBASIC1.32□□□□□ -2.2
USH1CQ9Y6N9 MIR29B2-201ENST00000385055 81 ntBASIC1.32□□□□□ -2.2
USH1CQ9Y6N9 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.32□□□□□ -2.2
USH1CQ9Y6N9 AC006366.1-201ENST00000422002 759 ntBASIC1.32□□□□□ -2.2
USH1CQ9Y6N9 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC1.32□□□□□ -2.2
USH1CQ9Y6N9 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.32□□□□□ -2.2
USH1CQ9Y6N9 ZNF736P5Y-201ENST00000451173 805 ntBASIC1.32□□□□□ -2.2
USH1CQ9Y6N9 AL353752.1-201ENST00000454946 260 ntBASIC1.32□□□□□ -2.2
USH1CQ9Y6N9 RNU6-1053P-201ENST00000515930 101 ntBASIC1.32□□□□□ -2.2
USH1CQ9Y6N9 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.32□□□□□ -2.2
USH1CQ9Y6N9 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.32□□□□□ -2.2
USH1CQ9Y6N9 AC078795.2-201ENST00000602835 1252 ntBASIC1.32□□□□□ -2.2
USH1CQ9Y6N9 AL512598.1-201ENST00000610158 273 ntBASIC1.32□□□□□ -2.2
USH1CQ9Y6N9 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.32□□□□□ -2.2
USH1CQ9Y6N9 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC1.32□□□□□ -2.2
USH1CQ9Y6N9 RNU6-661P-201ENST00000362409 107 ntBASIC1.31□□□□□ -2.2
USH1CQ9Y6N9 RNU6-203P-201ENST00000384038 104 ntBASIC1.31□□□□□ -2.2
USH1CQ9Y6N9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.31□□□□□ -2.2
USH1CQ9Y6N9 RPS20P2-201ENST00000402520 389 ntBASIC1.31□□□□□ -2.2
USH1CQ9Y6N9 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.31□□□□□ -2.2
USH1CQ9Y6N9 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.31□□□□□ -2.2
USH1CQ9Y6N9 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC1.31□□□□□ -2.2
USH1CQ9Y6N9 BTF3P4-201ENST00000418852 495 ntBASIC1.31□□□□□ -2.2
USH1CQ9Y6N9 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC1.31□□□□□ -2.2
USH1CQ9Y6N9 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.31□□□□□ -2.2
USH1CQ9Y6N9 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.31□□□□□ -2.2
USH1CQ9Y6N9 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.31□□□□□ -2.2
USH1CQ9Y6N9 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.31□□□□□ -2.2
USH1CQ9Y6N9 RPL30P6-201ENST00000475925 342 ntBASIC1.31□□□□□ -2.2
USH1CQ9Y6N9 AC093259.1-201ENST00000509755 300 ntBASIC1.31□□□□□ -2.2
USH1CQ9Y6N9 AC112206.3-201ENST00000514578 389 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms