Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.53
PDZRN3Q9UPQ7 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
PDZRN3Q9UPQ7 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.46□□□□□ -1.53
PDZRN3Q9UPQ7 DDX10P1-201ENST00000448545 1933 ntBASIC5.46□□□□□ -1.53
PDZRN3Q9UPQ7 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDZRN3Q9UPQ7 ENSAP1-201ENST00000392855 326 ntBASIC5.46□□□□□ -1.54
PDZRN3Q9UPQ7 Y_RNA.595-201ENST00000410403 105 ntBASIC5.46□□□□□ -1.54
PDZRN3Q9UPQ7 CYCSP19-201ENST00000411715 316 ntBASIC5.46□□□□□ -1.54
PDZRN3Q9UPQ7 COX6B1P7-201ENST00000430845 235 ntBASIC5.46□□□□□ -1.54
PDZRN3Q9UPQ7 AL353748.1-201ENST00000440753 474 ntBASIC5.46□□□□□ -1.54
PDZRN3Q9UPQ7 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.46□□□□□ -1.54
PDZRN3Q9UPQ7 AC099522.1-202ENST00000514718 367 ntBASIC5.46□□□□□ -1.54
PDZRN3Q9UPQ7 RN7SKP49-201ENST00000516675 260 ntBASIC5.46□□□□□ -1.54
PDZRN3Q9UPQ7 TVP23BP1-201ENST00000557500 617 ntBASIC5.46□□□□□ -1.54
PDZRN3Q9UPQ7 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC5.46□□□□□ -1.54
PDZRN3Q9UPQ7 SRGNP1-201ENST00000603392 451 ntBASIC5.46□□□□□ -1.54
PDZRN3Q9UPQ7 AC068831.7-201ENST00000616954 363 ntBASIC5.46□□□□□ -1.54
PDZRN3Q9UPQ7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC5.46□□□□□ -1.54
PDZRN3Q9UPQ7 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
PDZRN3Q9UPQ7 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
PDZRN3Q9UPQ7 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PDZRN3Q9UPQ7 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDZRN3Q9UPQ7 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDZRN3Q9UPQ7 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDZRN3Q9UPQ7 snoU2_19.4-201ENST00000364329 80 ntBASIC5.45□□□□□ -1.54
PDZRN3Q9UPQ7 RNU4-9P-201ENST00000364951 139 ntBASIC5.45□□□□□ -1.54
PDZRN3Q9UPQ7 RNU1-139P-201ENST00000391307 165 ntBASIC5.45□□□□□ -1.54
PDZRN3Q9UPQ7 RNU6ATAC-201ENST00000408749 126 ntBASIC5.45□□□□□ -1.54
PDZRN3Q9UPQ7 AC006461.1-201ENST00000412637 326 ntBASIC5.45□□□□□ -1.54
PDZRN3Q9UPQ7 AP000907.1-201ENST00000428428 510 ntBASIC5.45□□□□□ -1.54
PDZRN3Q9UPQ7 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.45□□□□□ -1.54
PDZRN3Q9UPQ7 AL162151.2-201ENST00000448875 158 ntBASIC5.45□□□□□ -1.54
PDZRN3Q9UPQ7 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC5.45□□□□□ -1.54
PDZRN3Q9UPQ7 Y_RNA.637-201ENST00000459424 114 ntBASIC5.45□□□□□ -1.54
PDZRN3Q9UPQ7 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC5.45□□□□□ -1.54
PDZRN3Q9UPQ7 RNU1-45P-201ENST00000517191 141 ntBASIC5.45□□□□□ -1.54
PDZRN3Q9UPQ7 AC109810.1-201ENST00000534066 224 ntBASIC5.45□□□□□ -1.54
PDZRN3Q9UPQ7 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.45□□□□□ -1.54
PDZRN3Q9UPQ7 LINC00901.1-201ENST00000617252 152 ntBASIC5.45□□□□□ -1.54
PDZRN3Q9UPQ7 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
PDZRN3Q9UPQ7 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC5.45□□□□□ -1.54
PDZRN3Q9UPQ7 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
PDZRN3Q9UPQ7 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
PDZRN3Q9UPQ7 CUL1P1-201ENST00000509510 2425 ntBASIC5.45□□□□□ -1.54
PDZRN3Q9UPQ7 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
PDZRN3Q9UPQ7 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC5.44□□□□□ -1.54
PDZRN3Q9UPQ7 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.44□□□□□ -1.54
PDZRN3Q9UPQ7 NOL8P1-201ENST00000508336 3529 ntBASIC5.44□□□□□ -1.54
PDZRN3Q9UPQ7 Y_RNA.534-201ENST00000384599 112 ntBASIC5.44□□□□□ -1.54
PDZRN3Q9UPQ7 MIR548A3-201ENST00000385297 97 ntBASIC5.44□□□□□ -1.54
PDZRN3Q9UPQ7 SNORD72-201ENST00000390994 80 ntBASIC5.44□□□□□ -1.54
PDZRN3Q9UPQ7 AL592148.1-201ENST00000413568 445 ntBASIC5.44□□□□□ -1.54
PDZRN3Q9UPQ7 AC007529.1-201ENST00000418574 2178 ntBASIC5.44□□□□□ -1.54
PDZRN3Q9UPQ7 BPY2DP-201ENST00000422208 265 ntBASIC5.44□□□□□ -1.54
PDZRN3Q9UPQ7 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC5.44□□□□□ -1.54
PDZRN3Q9UPQ7 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
PDZRN3Q9UPQ7 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.44□□□□□ -1.54
PDZRN3Q9UPQ7 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.44□□□□□ -1.54
PDZRN3Q9UPQ7 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC5.44□□□□□ -1.54
PDZRN3Q9UPQ7 RPL35AP15-201ENST00000468042 339 ntBASIC5.44□□□□□ -1.54
PDZRN3Q9UPQ7 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC5.44□□□□□ -1.54
PDZRN3Q9UPQ7 RN7SKP12-201ENST00000516275 143 ntBASIC5.44□□□□□ -1.54
PDZRN3Q9UPQ7 MIR892C-201ENST00000516410 77 ntBASIC5.44□□□□□ -1.54
PDZRN3Q9UPQ7 RNU6-966P-201ENST00000516479 104 ntBASIC5.44□□□□□ -1.54
PDZRN3Q9UPQ7 AC022790.1-201ENST00000522872 204 ntBASIC5.44□□□□□ -1.54
PDZRN3Q9UPQ7 MIR3646-201ENST00000578301 84 ntBASIC5.44□□□□□ -1.54
PDZRN3Q9UPQ7 MIR3944-201ENST00000581277 108 ntBASIC5.44□□□□□ -1.54
PDZRN3Q9UPQ7 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC5.44□□□□□ -1.54
PDZRN3Q9UPQ7 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PDZRN3Q9UPQ7 AC022441.3-201ENST00000605737 136 ntBASIC5.44□□□□□ -1.54
PDZRN3Q9UPQ7 AL136360.1-201ENST00000503377 1900 ntBASIC5.44□□□□□ -1.54
PDZRN3Q9UPQ7 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PDZRN3Q9UPQ7 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
PDZRN3Q9UPQ7 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.44□□□□□ -1.54
PDZRN3Q9UPQ7 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.43□□□□□ -1.54
PDZRN3Q9UPQ7 Z82217.1-201ENST00000625157 8149 ntBASIC5.43□□□□□ -1.54
PDZRN3Q9UPQ7 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.43□□□□□ -1.54
PDZRN3Q9UPQ7 RNU1-14P-201ENST00000362759 152 ntBASIC5.43□□□□□ -1.54
PDZRN3Q9UPQ7 SNORD114-19-201ENST00000363072 75 ntBASIC5.43□□□□□ -1.54
PDZRN3Q9UPQ7 RNU6-407P-201ENST00000365280 104 ntBASIC5.43□□□□□ -1.54
PDZRN3Q9UPQ7 SNORA70.4-201ENST00000365509 134 ntBASIC5.43□□□□□ -1.54
PDZRN3Q9UPQ7 RNU6-395P-201ENST00000365662 106 ntBASIC5.43□□□□□ -1.54
PDZRN3Q9UPQ7 RNU6-1293P-201ENST00000384077 107 ntBASIC5.43□□□□□ -1.54
PDZRN3Q9UPQ7 RNU6-106P-201ENST00000384405 107 ntBASIC5.43□□□□□ -1.54
PDZRN3Q9UPQ7 AC005042.3-201ENST00000453230 174 ntBASIC5.43□□□□□ -1.54
PDZRN3Q9UPQ7 RNA5SP73-201ENST00000516744 108 ntBASIC5.43□□□□□ -1.54
PDZRN3Q9UPQ7 snoMBII-202.2-201ENST00000517263 86 ntBASIC5.43□□□□□ -1.54
PDZRN3Q9UPQ7 IFITM8P-201ENST00000522529 394 ntBASIC5.43□□□□□ -1.54
PDZRN3Q9UPQ7 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
PDZRN3Q9UPQ7 MIR6875-201ENST00000617506 72 ntBASIC5.43□□□□□ -1.54
PDZRN3Q9UPQ7 RNU6-156P-201ENST00000621869 107 ntBASIC5.43□□□□□ -1.54
PDZRN3Q9UPQ7 AL353748.2-201ENST00000622148 471 ntBASIC5.43□□□□□ -1.54
PDZRN3Q9UPQ7 AC112200.1-201ENST00000625015 234 ntBASIC5.43□□□□□ -1.54
PDZRN3Q9UPQ7 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PDZRN3Q9UPQ7 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PDZRN3Q9UPQ7 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
PDZRN3Q9UPQ7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC5.43□□□□□ -1.54
PDZRN3Q9UPQ7 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC5.43□□□□□ -1.54
PDZRN3Q9UPQ7 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.43□□□□□ -1.54
PDZRN3Q9UPQ7 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms