Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 MTATP6P4-201ENST00000427725 675 ntBASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 AC079780.1-201ENST00000428259 207 ntBASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 MYL8P-204ENST00000431574 518 ntBASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 AC004383.1-201ENST00000438135 289 ntBASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 NDUFB1P2-201ENST00000449477 176 ntBASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 RNU6-1037P-201ENST00000459571 107 ntBASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 AC078817.1-201ENST00000492623 435 ntBASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 RNU1-95P-201ENST00000516357 160 ntBASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 MIR892C-201ENST00000516410 77 ntBASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 RNA5SP309-201ENST00000516670 106 ntBASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 RNU1-128P-201ENST00000516704 160 ntBASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 RNU6-579P-201ENST00000516879 102 ntBASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 RNU6-789P-201ENST00000517105 102 ntBASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 AC026403.1-201ENST00000518938 295 ntBASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 MIR5696-201ENST00000578474 85 ntBASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 MIR5187-201ENST00000583479 76 ntBASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 FTX_2.1-201ENST00000618816 94 ntBASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 AL034408.1-202ENST00000636088 415 ntBASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 MIR7153-201ENST00000637758 57 ntBASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 MTND5P9-201ENST00000503854 1755 ntBASIC3.38□□□□□ -1.87
PACSIN3Q9UKS6 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 SNORA5A-201ENST00000384111 134 ntBASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 RNU6-700P-201ENST00000391043 107 ntBASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 AL603910.2-201ENST00000407268 136 ntBASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 AL592148.1-201ENST00000413568 445 ntBASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 AC007098.1-201ENST00000420122 367 ntBASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 AP000907.1-201ENST00000428428 510 ntBASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 AP000873.1-201ENST00000463987 400 ntBASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 AC010469.2-201ENST00000496412 480 ntBASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 RNU6-927P-201ENST00000516199 100 ntBASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 DEFB108E-201ENST00000524692 240 ntBASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 MIR1273C-201ENST00000578669 77 ntBASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 AC009314.1-201ENST00000603871 304 ntBASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 AC004792.1-201ENST00000614523 137 ntBASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 RMST_4.1-201ENST00000616886 107 ntBASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 MIR4275-201ENST00000636486 87 ntBASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 AL450472.1-202ENST00000637286 180 ntBASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 AC009812.4-201ENST00000569134 1805 ntBASIC3.37□□□□□ -1.87
PACSIN3Q9UKS6 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 Z75746.1-201ENST00000440243 2080 ntBASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 Y_RNA.54-201ENST00000362766 105 ntBASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 Y_RNA.180-201ENST00000363867 113 ntBASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 RNU6-280P-201ENST00000364145 104 ntBASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 RNU6-335P-201ENST00000364563 113 ntBASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 RNU6-827P-201ENST00000365553 106 ntBASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 Y_RNA.458-201ENST00000384240 102 ntBASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 MIR7-3-201ENST00000384898 110 ntBASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 MTCO2P33-201ENST00000402100 465 ntBASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 MIR548H3-201ENST00000408771 118 ntBASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 AP000275.1-201ENST00000411943 390 ntBASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 AL096701.2-201ENST00000416920 238 ntBASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 AL159169.1-201ENST00000421119 127 ntBASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 AL357552.1-201ENST00000445254 415 ntBASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 HIGD1AP2-201ENST00000446367 280 ntBASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 AC021205.2-201ENST00000480069 347 ntBASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 AC074250.1-201ENST00000511117 192 ntBASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 RNU2-27P-201ENST00000516185 142 ntBASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 RNU6-911P-201ENST00000516523 104 ntBASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 RNU6-1315P-201ENST00000517187 99 ntBASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 IGKV2-23-201ENST00000518729 323 ntBASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 MIR3944-201ENST00000581277 108 ntBASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 SNRPGP15-201ENST00000600149 222 ntBASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 AC098826.3-201ENST00000603823 466 ntBASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PACSIN3Q9UKS6 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms