Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
DNMT3BQ9UBC3 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 AC007256.1-201ENST00000392253 2765 ntBASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 AC110491.1-201ENST00000562191 2010 ntBASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 RNY4P36-201ENST00000391116 96 ntBASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 AL354751.2-201ENST00000415471 210 ntBASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 CST9LP2-201ENST00000437612 320 ntBASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 AC098831.1-201ENST00000440661 216 ntBASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 AC010099.1-201ENST00000455434 375 ntBASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 RPS29P20-201ENST00000489592 171 ntBASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 AC018437.1-201ENST00000492214 406 ntBASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 AC022432.1-201ENST00000595739 310 ntBASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 AL121917.1-203ENST00000605534 577 ntBASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 AC124303.1-201ENST00000605703 360 ntBASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 AC019193.3-201ENST00000609144 554 ntBASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 AL133215.3-201ENST00000609801 448 ntBASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 AC133104.2-201ENST00000615272 193 ntBASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 PISRT1.1-201ENST00000616930 107 ntBASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 MIR6134-201ENST00000617606 109 ntBASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 AC244517.12-201ENST00000623581 663 ntBASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 DLD-214ENST00000639772 421 ntTSL 5 BASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.28□□□□□ -1.88
DNMT3BQ9UBC3 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
DNMT3BQ9UBC3 MTND5P27-201ENST00000428871 1720 ntBASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 MIR148B-201ENST00000362252 99 ntBASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 SNORA5B-201ENST00000363786 132 ntBASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 RNU6-933P-201ENST00000384424 107 ntBASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 SNORD15B-201ENST00000384714 146 ntBASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 AL030996.1-201ENST00000411430 235 ntBASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 HMGN2P20-201ENST00000437531 273 ntBASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 HIGD1AP11-201ENST00000438361 280 ntBASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 PCMTD1P1-201ENST00000455560 355 ntBASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 RNU7-187P-201ENST00000458985 68 ntBASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 Y_RNA.653-201ENST00000459091 95 ntBASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 RNU6-377P-201ENST00000515965 102 ntBASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 Y_RNA.708-201ENST00000516950 96 ntBASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 AC104027.1-201ENST00000521887 300 ntBASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 APOOP3-201ENST00000536787 586 ntBASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 AL591516.1-201ENST00000611326 274 ntBASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 AC073476.4-201ENST00000628409 72 ntBASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 FILIP1L-206ENST00000471562 2854 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC3.27□□□□□ -1.89
DNMT3BQ9UBC3 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 Y_RNA.138-201ENST00000363462 102 ntBASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 RNU6-1188P-201ENST00000363795 107 ntBASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 RNU6-827P-201ENST00000365553 106 ntBASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 RNU6-198P-201ENST00000384258 104 ntBASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 SNORD116-29-201ENST00000384516 83 ntBASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 RNU6-306P-201ENST00000384617 107 ntBASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 MIR517A-201ENST00000385001 87 ntBASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 MIR518D-201ENST00000385014 87 ntBASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 RNU6-1077P-201ENST00000410506 102 ntBASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 BPY2DP-201ENST00000422208 265 ntBASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 SETP5-201ENST00000437270 562 ntBASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 AP002884.2-201ENST00000471647 395 ntBASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 AK3P2-201ENST00000507976 429 ntBASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 RNU6-1170P-201ENST00000515974 106 ntBASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 SNORA31.1-201ENST00000515993 133 ntBASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 SNORA31.5-201ENST00000516190 133 ntBASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 SCARNA20.6-201ENST00000517251 106 ntBASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 AP003072.1-201ENST00000531740 145 ntBASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 AC010186.2-204ENST00000537668 439 ntBASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 HMGN2P15-201ENST00000585707 270 ntBASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.26□□□□□ -1.89
DNMT3BQ9UBC3 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 129 ms