Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.35□□□□□ -1.87
LRIT1Q9P2V4 DYNLT3P2-201ENST00000442517 295 ntBASIC3.35□□□□□ -1.87
LRIT1Q9P2V4 AL590664.1-201ENST00000448065 339 ntBASIC3.35□□□□□ -1.87
LRIT1Q9P2V4 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.35□□□□□ -1.87
LRIT1Q9P2V4 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC3.35□□□□□ -1.87
LRIT1Q9P2V4 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.35□□□□□ -1.87
LRIT1Q9P2V4 RN7SL594P-201ENST00000470590 287 ntBASIC3.35□□□□□ -1.87
LRIT1Q9P2V4 RPS20P22-201ENST00000473700 357 ntBASIC3.35□□□□□ -1.87
LRIT1Q9P2V4 RPL22P13-201ENST00000493291 347 ntBASIC3.35□□□□□ -1.87
LRIT1Q9P2V4 RNU6-143P-201ENST00000516942 93 ntBASIC3.35□□□□□ -1.87
LRIT1Q9P2V4 AC025755.1-201ENST00000521306 278 ntBASIC3.35□□□□□ -1.87
LRIT1Q9P2V4 AC022616.4-201ENST00000522985 181 ntBASIC3.35□□□□□ -1.87
LRIT1Q9P2V4 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.35□□□□□ -1.87
LRIT1Q9P2V4 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.35□□□□□ -1.87
LRIT1Q9P2V4 AL355297.3-201ENST00000604082 446 ntBASIC3.35□□□□□ -1.87
LRIT1Q9P2V4 MIR1244-1-201ENST00000612829 85 ntBASIC3.35□□□□□ -1.87
LRIT1Q9P2V4 U2.1-201ENST00000618978 145 ntBASIC3.35□□□□□ -1.87
LRIT1Q9P2V4 MIR1244-3-201ENST00000635744 85 ntBASIC3.35□□□□□ -1.87
LRIT1Q9P2V4 MIR1244-2-201ENST00000636449 85 ntBASIC3.35□□□□□ -1.87
LRIT1Q9P2V4 MIR1244-4-202ENST00000636813 85 ntBASIC3.35□□□□□ -1.87
LRIT1Q9P2V4 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LRIT1Q9P2V4 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LRIT1Q9P2V4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
LRIT1Q9P2V4 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LRIT1Q9P2V4 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC3.34□□□□□ -1.87
LRIT1Q9P2V4 RNA5SP42-201ENST00000364278 115 ntBASIC3.34□□□□□ -1.87
LRIT1Q9P2V4 RNU6-827P-201ENST00000365553 106 ntBASIC3.34□□□□□ -1.87
LRIT1Q9P2V4 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC3.34□□□□□ -1.87
LRIT1Q9P2V4 RNU6-1026P-201ENST00000384465 108 ntBASIC3.34□□□□□ -1.87
LRIT1Q9P2V4 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.34□□□□□ -1.87
LRIT1Q9P2V4 RN7SKP111-201ENST00000410349 271 ntBASIC3.34□□□□□ -1.87
LRIT1Q9P2V4 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LRIT1Q9P2V4 AC006989.1-201ENST00000427212 131 ntBASIC3.34□□□□□ -1.87
LRIT1Q9P2V4 AC007919.1-201ENST00000429380 217 ntBASIC3.34□□□□□ -1.87
LRIT1Q9P2V4 CYCSP32-201ENST00000440548 321 ntBASIC3.34□□□□□ -1.87
LRIT1Q9P2V4 OR2AQ1P-201ENST00000451972 200 ntBASIC3.34□□□□□ -1.87
LRIT1Q9P2V4 CECR9-201ENST00000453421 199 ntBASIC3.34□□□□□ -1.87
LRIT1Q9P2V4 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC3.34□□□□□ -1.87
LRIT1Q9P2V4 RNU7-169P-201ENST00000459456 61 ntBASIC3.34□□□□□ -1.87
LRIT1Q9P2V4 Y_RNA.715-201ENST00000517082 110 ntBASIC3.34□□□□□ -1.87
LRIT1Q9P2V4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.34□□□□□ -1.87
LRIT1Q9P2V4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.34□□□□□ -1.87
LRIT1Q9P2V4 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.34□□□□□ -1.87
LRIT1Q9P2V4 AC006557.5-201ENST00000603126 811 ntBASIC3.34□□□□□ -1.87
LRIT1Q9P2V4 AC009314.1-201ENST00000603871 304 ntBASIC3.34□□□□□ -1.87
LRIT1Q9P2V4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
LRIT1Q9P2V4 CEP170P1-201ENST00000502249 4587 ntBASIC3.34□□□□□ -1.87
LRIT1Q9P2V4 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
LRIT1Q9P2V4 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 RPL9P7-201ENST00000330965 580 ntBASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 MIR412-201ENST00000362142 91 ntBASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 Y_RNA.245-201ENST00000364493 95 ntBASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 RNU6-806P-201ENST00000365147 105 ntBASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 Y_RNA.424-201ENST00000384063 103 ntBASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 MIR1252-201ENST00000408861 65 ntBASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 RNA5SP38-201ENST00000410750 119 ntBASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 AC017079.2-201ENST00000416102 485 ntBASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 AL117339.3-201ENST00000418733 162 ntBASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 USP9YP16-201ENST00000430287 407 ntBASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 AL513043.1-201ENST00000439124 535 ntBASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 USP9YP23-201ENST00000455085 407 ntBASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 RPL9P9-202ENST00000466501 579 ntBASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 AC084357.1-201ENST00000473404 255 ntBASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 RPL23AP45-201ENST00000476406 468 ntBASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 RPL30P5-201ENST00000494923 336 ntBASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 ACA59.1-201ENST00000515966 143 ntBASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 Y_RNA.680-201ENST00000516441 93 ntBASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 Y_RNA.687-201ENST00000516558 91 ntBASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 RNU6-711P-201ENST00000517255 106 ntBASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 AC040926.1-201ENST00000530195 238 ntBASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 AC103996.1-201ENST00000555468 102 ntBASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 MIR4273-201ENST00000582824 84 ntBASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 Z98751.3-201ENST00000604447 521 ntBASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 AL442067.1-201ENST00000613261 223 ntBASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 HMGB1P24-202ENST00000615653 685 ntBASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 MFSD8-233ENST00000641482 4860 ntBASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
LRIT1Q9P2V4 FIGNL1-201ENST00000356889 3471 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LRIT1Q9P2V4 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LRIT1Q9P2V4 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
LRIT1Q9P2V4 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
LRIT1Q9P2V4 RNU6-283P-201ENST00000364788 107 ntBASIC3.32□□□□□ -1.88
LRIT1Q9P2V4 SNORD14.1-201ENST00000365609 90 ntBASIC3.32□□□□□ -1.88
LRIT1Q9P2V4 Y_RNA.380-201ENST00000365663 111 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms