Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 SNORA5B-201ENST00000363786 132 ntBASIC3.32□□□□□ -1.88
COL20A1Q9P218 RNU6-593P-201ENST00000364716 112 ntBASIC3.32□□□□□ -1.88
COL20A1Q9P218 Y_RNA.339-201ENST00000365325 102 ntBASIC3.32□□□□□ -1.88
COL20A1Q9P218 SNORD73A-201ENST00000386062 65 ntBASIC3.32□□□□□ -1.88
COL20A1Q9P218 RNU1-101P-201ENST00000391171 127 ntBASIC3.32□□□□□ -1.88
COL20A1Q9P218 RN7SKP158-201ENST00000410453 326 ntBASIC3.32□□□□□ -1.88
COL20A1Q9P218 RPL37P10-201ENST00000412884 288 ntBASIC3.32□□□□□ -1.88
COL20A1Q9P218 AC096649.2-201ENST00000416186 393 ntBASIC3.32□□□□□ -1.88
COL20A1Q9P218 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.32□□□□□ -1.88
COL20A1Q9P218 AC236972.1-201ENST00000433225 199 ntBASIC3.32□□□□□ -1.88
COL20A1Q9P218 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.32□□□□□ -1.88
COL20A1Q9P218 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC3.32□□□□□ -1.88
COL20A1Q9P218 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.32□□□□□ -1.88
COL20A1Q9P218 UBE2DNL-203ENST00000474922 222 ntBASIC3.32□□□□□ -1.88
COL20A1Q9P218 AC116655.1-201ENST00000508324 901 ntBASIC3.32□□□□□ -1.88
COL20A1Q9P218 RN7SKP24-201ENST00000515888 284 ntBASIC3.32□□□□□ -1.88
COL20A1Q9P218 RNA5SP356-201ENST00000515972 94 ntBASIC3.32□□□□□ -1.88
COL20A1Q9P218 Y_RNA.675-201ENST00000516389 149 ntBASIC3.32□□□□□ -1.88
COL20A1Q9P218 SNORA43.2-201ENST00000516652 128 ntBASIC3.32□□□□□ -1.88
COL20A1Q9P218 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.32□□□□□ -1.88
COL20A1Q9P218 AC104576.1-201ENST00000524225 88 ntBASIC3.32□□□□□ -1.88
COL20A1Q9P218 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC3.32□□□□□ -1.88
COL20A1Q9P218 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.32□□□□□ -1.88
COL20A1Q9P218 MIR4672-201ENST00000583126 81 ntBASIC3.32□□□□□ -1.88
COL20A1Q9P218 AC010378.1-201ENST00000619270 362 ntBASIC3.32□□□□□ -1.88
COL20A1Q9P218 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.32□□□□□ -1.88
COL20A1Q9P218 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.32□□□□□ -1.88
COL20A1Q9P218 U4.7-201ENST00000638126 106 ntBASIC3.32□□□□□ -1.88
COL20A1Q9P218 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.32□□□□□ -1.88
COL20A1Q9P218 AC008669.1-201ENST00000565823 2178 ntBASIC3.32□□□□□ -1.88
COL20A1Q9P218 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL20A1Q9P218 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL20A1Q9P218 MTND4P29-201ENST00000503122 1372 ntBASIC3.31□□□□□ -1.88
COL20A1Q9P218 RNU6-78P-201ENST00000362897 107 ntBASIC3.31□□□□□ -1.88
COL20A1Q9P218 Y_RNA.387-201ENST00000383918 102 ntBASIC3.31□□□□□ -1.88
COL20A1Q9P218 RNU6-95P-201ENST00000384697 107 ntBASIC3.31□□□□□ -1.88
COL20A1Q9P218 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.31□□□□□ -1.88
COL20A1Q9P218 RPL21P40-201ENST00000428586 483 ntBASIC3.31□□□□□ -1.88
COL20A1Q9P218 RPS3AP52-201ENST00000435639 297 ntBASIC3.31□□□□□ -1.88
COL20A1Q9P218 AC012308.1-201ENST00000451232 178 ntBASIC3.31□□□□□ -1.88
COL20A1Q9P218 AC092001.1-201ENST00000453012 261 ntBASIC3.31□□□□□ -1.88
COL20A1Q9P218 RNA5SP367-201ENST00000516557 118 ntBASIC3.31□□□□□ -1.88
COL20A1Q9P218 RNU1-54P-201ENST00000517181 120 ntBASIC3.31□□□□□ -1.88
COL20A1Q9P218 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
COL20A1Q9P218 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.31□□□□□ -1.88
COL20A1Q9P218 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.31□□□□□ -1.88
COL20A1Q9P218 AL670379.10-201ENST00000604330 253 ntBASIC3.31□□□□□ -1.88
COL20A1Q9P218 AL670379.9-201ENST00000605428 253 ntBASIC3.31□□□□□ -1.88
COL20A1Q9P218 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.31□□□□□ -1.88
COL20A1Q9P218 AC069234.5-201ENST00000611056 416 ntBASIC3.31□□□□□ -1.88
COL20A1Q9P218 AC244517.12-201ENST00000623581 663 ntBASIC3.31□□□□□ -1.88
COL20A1Q9P218 AL365361.1-201ENST00000566942 3481 ntBASIC3.31□□□□□ -1.88
COL20A1Q9P218 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL20A1Q9P218 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL20A1Q9P218 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL20A1Q9P218 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
COL20A1Q9P218 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
COL20A1Q9P218 AC096644.4-201ENST00000563417 2912 ntBASIC3.3□□□□□ -1.88
COL20A1Q9P218 SNORD62.1-201ENST00000362541 86 ntBASIC3.3□□□□□ -1.88
COL20A1Q9P218 RNA5SP139-201ENST00000364340 117 ntBASIC3.3□□□□□ -1.88
COL20A1Q9P218 RNU6-827P-201ENST00000365553 106 ntBASIC3.3□□□□□ -1.88
COL20A1Q9P218 MIR767-201ENST00000390228 109 ntBASIC3.3□□□□□ -1.88
COL20A1Q9P218 RNA5SP354-201ENST00000391247 136 ntBASIC3.3□□□□□ -1.88
COL20A1Q9P218 AL031121.1-201ENST00000406553 254 ntBASIC3.3□□□□□ -1.88
COL20A1Q9P218 AC023141.4-201ENST00000412031 328 ntBASIC3.3□□□□□ -1.88
COL20A1Q9P218 AL117339.3-201ENST00000418733 162 ntBASIC3.3□□□□□ -1.88
COL20A1Q9P218 AL365496.1-201ENST00000426885 215 ntBASIC3.3□□□□□ -1.88
COL20A1Q9P218 FABP5P14-201ENST00000437273 393 ntBASIC3.3□□□□□ -1.88
COL20A1Q9P218 AC105272.1-201ENST00000438604 198 ntBASIC3.3□□□□□ -1.88
COL20A1Q9P218 AL161651.1-201ENST00000440882 223 ntBASIC3.3□□□□□ -1.88
COL20A1Q9P218 AC108938.1-201ENST00000451204 136 ntBASIC3.3□□□□□ -1.88
COL20A1Q9P218 AC013470.1-201ENST00000453438 462 ntBASIC3.3□□□□□ -1.88
COL20A1Q9P218 AL441985.1-201ENST00000457727 251 ntBASIC3.3□□□□□ -1.88
COL20A1Q9P218 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.3□□□□□ -1.88
COL20A1Q9P218 AK3P2-201ENST00000507976 429 ntBASIC3.3□□□□□ -1.88
COL20A1Q9P218 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.3□□□□□ -1.88
COL20A1Q9P218 RNU6-581P-201ENST00000516214 105 ntBASIC3.3□□□□□ -1.88
COL20A1Q9P218 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.3□□□□□ -1.88
COL20A1Q9P218 AC093331.1-201ENST00000521474 169 ntBASIC3.3□□□□□ -1.88
COL20A1Q9P218 CR383656.8-201ENST00000549046 145 ntBASIC3.3□□□□□ -1.88
COL20A1Q9P218 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.3□□□□□ -1.88
COL20A1Q9P218 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC3.3□□□□□ -1.88
COL20A1Q9P218 AL355375.2-201ENST00000574825 175 ntBASIC3.3□□□□□ -1.88
COL20A1Q9P218 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.3□□□□□ -1.88
COL20A1Q9P218 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.3□□□□□ -1.88
COL20A1Q9P218 AC064836.2-201ENST00000609491 462 ntBASIC3.3□□□□□ -1.88
COL20A1Q9P218 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC3.3□□□□□ -1.88
COL20A1Q9P218 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.3□□□□□ -1.88
COL20A1Q9P218 AC073544.1-201ENST00000600110 1595 ntBASIC3.29□□□□□ -1.88
COL20A1Q9P218 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
COL20A1Q9P218 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
COL20A1Q9P218 RNU6-858P-201ENST00000362436 107 ntBASIC3.29□□□□□ -1.88
COL20A1Q9P218 RNA5SP383-201ENST00000362934 120 ntBASIC3.29□□□□□ -1.88
COL20A1Q9P218 RNU6-942P-201ENST00000363002 107 ntBASIC3.29□□□□□ -1.88
COL20A1Q9P218 RNU6-527P-201ENST00000363425 104 ntBASIC3.29□□□□□ -1.88
COL20A1Q9P218 RNU6-799P-201ENST00000363567 107 ntBASIC3.29□□□□□ -1.88
COL20A1Q9P218 Y_RNA.474-201ENST00000384341 102 ntBASIC3.29□□□□□ -1.88
COL20A1Q9P218 Y_RNA.482-201ENST00000384377 111 ntBASIC3.29□□□□□ -1.88
COL20A1Q9P218 RNU6-933P-201ENST00000384424 107 ntBASIC3.29□□□□□ -1.88
COL20A1Q9P218 SNORA46-201ENST00000384762 135 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 1089 ms