Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
CALCOCO1Q9P1Z2 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CALCOCO1Q9P1Z2 KPNA2P1-201ENST00000458289 1591 ntBASIC3.55□□□□□ -1.84
CALCOCO1Q9P1Z2 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.55□□□□□ -1.84
CALCOCO1Q9P1Z2 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 RNU6-778P-201ENST00000363269 103 ntBASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 RNU6-270P-201ENST00000364131 105 ntBASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 MIR128-1-201ENST00000384921 82 ntBASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 MIR517A-201ENST00000385001 87 ntBASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 MIR634-201ENST00000385208 97 ntBASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 U3.19-201ENST00000390893 196 ntBASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 SNORA48.2-201ENST00000390926 124 ntBASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 SAR1AP2-201ENST00000392696 594 ntBASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 MIR888-201ENST00000401186 77 ntBASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 AC096664.2-201ENST00000411843 406 ntBASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 AC236972.1-201ENST00000433225 199 ntBASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 AL590664.1-201ENST00000448065 339 ntBASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 AC093303.1-201ENST00000514549 295 ntBASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 LINC00933-203ENST00000559812 219 ntBASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 CYCSP39-201ENST00000565821 309 ntBASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 AMZ2P1-203ENST00000565833 850 ntBASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 HSPE1P7-201ENST00000604681 321 ntBASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 AL157817.1-201ENST00000614264 790 ntBASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 AC133104.2-201ENST00000615272 193 ntBASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 U2.21-201ENST00000637295 81 ntBASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 AC108206.1-201ENST00000570186 4159 ntBASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.54□□□□□ -1.84
CALCOCO1Q9P1Z2 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 Y_RNA.187-201ENST00000363918 113 ntBASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 RNU6-827P-201ENST00000365553 106 ntBASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 RNU6-310P-201ENST00000384655 107 ntBASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 SNORA46-201ENST00000384762 135 ntBASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 RNU1-101P-201ENST00000391171 127 ntBASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 RN7SKP111-201ENST00000410349 271 ntBASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 Y_RNA.594-201ENST00000410373 140 ntBASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 AL030996.1-201ENST00000411430 235 ntBASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 RPL26P27-201ENST00000414397 437 ntBASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 ATG3P1-201ENST00000419507 911 ntBASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 USP9YP30-201ENST00000430729 455 ntBASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 RPL39P40-201ENST00000445481 146 ntBASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 MTATP6P7-201ENST00000453315 681 ntBASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 MTCO3P10-201ENST00000455912 772 ntBASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 snoU13.28-201ENST00000459235 104 ntBASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 RNU6-1037P-201ENST00000459571 107 ntBASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 RPL7P42-201ENST00000481005 679 ntBASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 RPS29P20-201ENST00000489592 171 ntBASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 AC026782.1-201ENST00000512952 449 ntBASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 SCARNA20.6-201ENST00000517251 106 ntBASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 HIGD1AP1-201ENST00000550979 275 ntBASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 AL442663.2-201ENST00000554385 511 ntBASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 AC018462.2-201ENST00000605375 395 ntBASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 AP000654.2-201ENST00000605633 586 ntBASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 AL161629.2-201ENST00000615347 275 ntBASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 MIR7112-201ENST00000616126 65 ntBASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
CALCOCO1Q9P1Z2 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.53□□□□□ -1.85
CALCOCO1Q9P1Z2 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CALCOCO1Q9P1Z2 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
CALCOCO1Q9P1Z2 RNU6-898P-201ENST00000365627 104 ntBASIC3.52□□□□□ -1.85
CALCOCO1Q9P1Z2 RNU6-933P-201ENST00000384424 107 ntBASIC3.52□□□□□ -1.85
CALCOCO1Q9P1Z2 Y_RNA.646-201ENST00000410980 101 ntBASIC3.52□□□□□ -1.85
CALCOCO1Q9P1Z2 RNU6-325P-201ENST00000411132 105 ntBASIC3.52□□□□□ -1.85
CALCOCO1Q9P1Z2 AL356968.1-201ENST00000416622 474 ntBASIC3.52□□□□□ -1.85
CALCOCO1Q9P1Z2 Z82205.1-201ENST00000428456 297 ntBASIC3.52□□□□□ -1.85
CALCOCO1Q9P1Z2 BTF3P15-201ENST00000455606 336 ntBASIC3.52□□□□□ -1.85
CALCOCO1Q9P1Z2 RPL26P9-201ENST00000457466 433 ntBASIC3.52□□□□□ -1.85
CALCOCO1Q9P1Z2 MTCYBP40-201ENST00000509390 1135 ntBASIC3.52□□□□□ -1.85
CALCOCO1Q9P1Z2 AC113155.1-201ENST00000511141 769 ntBASIC3.52□□□□□ -1.85
CALCOCO1Q9P1Z2 Y_RNA.670-201ENST00000516255 105 ntBASIC3.52□□□□□ -1.85
CALCOCO1Q9P1Z2 RNU6-711P-201ENST00000517255 106 ntBASIC3.52□□□□□ -1.85
CALCOCO1Q9P1Z2 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.52□□□□□ -1.85
CALCOCO1Q9P1Z2 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.52□□□□□ -1.85
CALCOCO1Q9P1Z2 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC3.52□□□□□ -1.85
CALCOCO1Q9P1Z2 MTCO3P13-201ENST00000577757 781 ntBASIC3.52□□□□□ -1.85
CALCOCO1Q9P1Z2 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.52□□□□□ -1.85
CALCOCO1Q9P1Z2 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.52□□□□□ -1.85
CALCOCO1Q9P1Z2 AC006557.5-201ENST00000603126 811 ntBASIC3.52□□□□□ -1.85
CALCOCO1Q9P1Z2 AP000787.2-201ENST00000604432 568 ntBASIC3.52□□□□□ -1.85
CALCOCO1Q9P1Z2 YPEL5P2-201ENST00000605553 359 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms