Protein–RNA interactions for Protein: Q9NX63

CHCHD3, MICOS complex subunit MIC19, humanhuman

Known RBP Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3Q9NX63 RNU2-16P-201ENST00000410712 136 ntBASIC2.41□□□□□ -2.02
CHCHD3Q9NX63 RNU6-1245P-201ENST00000411130 106 ntBASIC2.41□□□□□ -2.02
CHCHD3Q9NX63 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.41□□□□□ -2.02
CHCHD3Q9NX63 TPT1P7-201ENST00000458300 517 ntBASIC2.41□□□□□ -2.02
CHCHD3Q9NX63 RNA5SP233-201ENST00000459153 113 ntBASIC2.41□□□□□ -2.02
CHCHD3Q9NX63 RNU7-167P-201ENST00000459160 62 ntBASIC2.41□□□□□ -2.02
CHCHD3Q9NX63 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.41□□□□□ -2.02
CHCHD3Q9NX63 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.41□□□□□ -2.02
CHCHD3Q9NX63 AL163973.1-201ENST00000484753 577 ntBASIC2.41□□□□□ -2.02
CHCHD3Q9NX63 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC2.41□□□□□ -2.02
CHCHD3Q9NX63 RNU2-53P-201ENST00000516257 147 ntBASIC2.41□□□□□ -2.02
CHCHD3Q9NX63 COPS8P3-201ENST00000526024 482 ntBASIC2.41□□□□□ -2.02
CHCHD3Q9NX63 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.41□□□□□ -2.02
CHCHD3Q9NX63 HIF1AP1-201ENST00000553642 175 ntBASIC2.41□□□□□ -2.02
CHCHD3Q9NX63 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.41□□□□□ -2.02
CHCHD3Q9NX63 AP005136.1-201ENST00000579765 429 ntBASIC2.41□□□□□ -2.02
CHCHD3Q9NX63 MIR4635-201ENST00000583759 79 ntBASIC2.41□□□□□ -2.02
CHCHD3Q9NX63 MIR4448-201ENST00000584360 86 ntBASIC2.41□□□□□ -2.02
CHCHD3Q9NX63 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.41□□□□□ -2.02
CHCHD3Q9NX63 AL713866.2-201ENST00000603579 219 ntBASIC2.41□□□□□ -2.02
CHCHD3Q9NX63 AL136363.2-201ENST00000604173 851 ntBASIC2.41□□□□□ -2.02
CHCHD3Q9NX63 AL355297.2-201ENST00000604792 129 ntBASIC2.41□□□□□ -2.02
CHCHD3Q9NX63 AP001330.5-201ENST00000607176 411 ntBASIC2.41□□□□□ -2.02
CHCHD3Q9NX63 U2.17-201ENST00000611454 95 ntBASIC2.41□□□□□ -2.02
CHCHD3Q9NX63 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.41□□□□□ -2.02
CHCHD3Q9NX63 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CHCHD3Q9NX63 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.41□□□□□ -2.02
CHCHD3Q9NX63 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
CHCHD3Q9NX63 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
CHCHD3Q9NX63 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.4□□□□□ -2.02
CHCHD3Q9NX63 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.03
CHCHD3Q9NX63 RNU6-1322P-201ENST00000364309 107 ntBASIC2.4□□□□□ -2.03
CHCHD3Q9NX63 MIR561-201ENST00000385216 97 ntBASIC2.4□□□□□ -2.03
CHCHD3Q9NX63 RNU2-40P-201ENST00000410833 196 ntBASIC2.4□□□□□ -2.03
CHCHD3Q9NX63 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.4□□□□□ -2.03
CHCHD3Q9NX63 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.4□□□□□ -2.03
CHCHD3Q9NX63 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.4□□□□□ -2.03
CHCHD3Q9NX63 RNU6-261P-201ENST00000459506 102 ntBASIC2.4□□□□□ -2.03
CHCHD3Q9NX63 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.4□□□□□ -2.03
CHCHD3Q9NX63 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.4□□□□□ -2.03
CHCHD3Q9NX63 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC2.4□□□□□ -2.03
CHCHD3Q9NX63 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.4□□□□□ -2.03
CHCHD3Q9NX63 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.4□□□□□ -2.03
CHCHD3Q9NX63 AC115990.1-201ENST00000526957 301 ntBASIC2.4□□□□□ -2.03
CHCHD3Q9NX63 IMMP1LP2-201ENST00000552954 492 ntBASIC2.4□□□□□ -2.03
CHCHD3Q9NX63 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.4□□□□□ -2.03
CHCHD3Q9NX63 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.4□□□□□ -2.03
CHCHD3Q9NX63 MTATP6P3-201ENST00000581686 676 ntBASIC2.4□□□□□ -2.03
CHCHD3Q9NX63 AC008752.3-201ENST00000588113 712 ntBASIC2.4□□□□□ -2.03
CHCHD3Q9NX63 RPL30P11-203ENST00000598995 310 ntBASIC2.4□□□□□ -2.03
CHCHD3Q9NX63 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.4□□□□□ -2.03
CHCHD3Q9NX63 AL162373.1-201ENST00000620433 407 ntBASIC2.4□□□□□ -2.03
CHCHD3Q9NX63 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
CHCHD3Q9NX63 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.39□□□□□ -2.03
CHCHD3Q9NX63 Y_RNA.255-201ENST00000364581 97 ntBASIC2.39□□□□□ -2.03
CHCHD3Q9NX63 SNORA16.2-201ENST00000390991 127 ntBASIC2.39□□□□□ -2.03
CHCHD3Q9NX63 SNORA48.5-201ENST00000391143 135 ntBASIC2.39□□□□□ -2.03
CHCHD3Q9NX63 CBX3P9-201ENST00000402326 552 ntBASIC2.39□□□□□ -2.03
CHCHD3Q9NX63 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.39□□□□□ -2.03
CHCHD3Q9NX63 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.39□□□□□ -2.03
CHCHD3Q9NX63 AC073415.1-201ENST00000449240 153 ntBASIC2.39□□□□□ -2.03
CHCHD3Q9NX63 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.39□□□□□ -2.03
CHCHD3Q9NX63 AC140059.1-201ENST00000489238 361 ntBASIC2.39□□□□□ -2.03
CHCHD3Q9NX63 RN7SL504P-201ENST00000494496 287 ntBASIC2.39□□□□□ -2.03
CHCHD3Q9NX63 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.39□□□□□ -2.03
CHCHD3Q9NX63 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.39□□□□□ -2.03
CHCHD3Q9NX63 AC097462.2-201ENST00000504623 481 ntBASIC2.39□□□□□ -2.03
CHCHD3Q9NX63 AC093534.1-201ENST00000504977 132 ntBASIC2.39□□□□□ -2.03
CHCHD3Q9NX63 SNORA25.11-201ENST00000515935 105 ntBASIC2.39□□□□□ -2.03
CHCHD3Q9NX63 SNORA40.12-201ENST00000516329 111 ntBASIC2.39□□□□□ -2.03
CHCHD3Q9NX63 RN7SKP256-201ENST00000517201 314 ntBASIC2.39□□□□□ -2.03
CHCHD3Q9NX63 MTND4P7-201ENST00000523876 130 ntBASIC2.39□□□□□ -2.03
CHCHD3Q9NX63 AP003392.2-201ENST00000527269 208 ntBASIC2.39□□□□□ -2.03
CHCHD3Q9NX63 AC009063.1-201ENST00000563342 702 ntBASIC2.39□□□□□ -2.03
CHCHD3Q9NX63 AC097065.2-201ENST00000608159 533 ntBASIC2.39□□□□□ -2.03
CHCHD3Q9NX63 AC104073.3-201ENST00000610942 955 ntBASIC2.39□□□□□ -2.03
CHCHD3Q9NX63 AL161423.1-201ENST00000613700 262 ntBASIC2.39□□□□□ -2.03
CHCHD3Q9NX63 ATP5A1P2-202ENST00000616464 443 ntBASIC2.39□□□□□ -2.03
CHCHD3Q9NX63 AC098657.3-201ENST00000620434 263 ntBASIC2.39□□□□□ -2.03
CHCHD3Q9NX63 SDR42E1P4-201ENST00000620894 481 ntBASIC2.39□□□□□ -2.03
CHCHD3Q9NX63 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
CHCHD3Q9NX63 MTND5P26-201ENST00000426018 1752 ntBASIC2.38□□□□□ -2.03
CHCHD3Q9NX63 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
CHCHD3Q9NX63 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
CHCHD3Q9NX63 SNORD56.1-201ENST00000362913 68 ntBASIC2.38□□□□□ -2.03
CHCHD3Q9NX63 RNU6-527P-201ENST00000363425 104 ntBASIC2.38□□□□□ -2.03
CHCHD3Q9NX63 RNU6-105P-201ENST00000363909 104 ntBASIC2.38□□□□□ -2.03
CHCHD3Q9NX63 RNU6-259P-201ENST00000383999 107 ntBASIC2.38□□□□□ -2.03
CHCHD3Q9NX63 RNU6-1222P-201ENST00000384615 107 ntBASIC2.38□□□□□ -2.03
CHCHD3Q9NX63 MIR29B2-201ENST00000385055 81 ntBASIC2.38□□□□□ -2.03
CHCHD3Q9NX63 Z92545.1-201ENST00000411782 234 ntBASIC2.38□□□□□ -2.03
CHCHD3Q9NX63 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.38□□□□□ -2.03
CHCHD3Q9NX63 AC008267.5-201ENST00000424928 265 ntBASIC2.38□□□□□ -2.03
CHCHD3Q9NX63 AC010975.2-201ENST00000427781 588 ntBASIC2.38□□□□□ -2.03
CHCHD3Q9NX63 AL451074.3-201ENST00000437709 472 ntBASIC2.38□□□□□ -2.03
CHCHD3Q9NX63 AC009238.1-201ENST00000442165 424 ntBASIC2.38□□□□□ -2.03
CHCHD3Q9NX63 AC009237.6-201ENST00000446969 424 ntBASIC2.38□□□□□ -2.03
CHCHD3Q9NX63 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.38□□□□□ -2.03
CHCHD3Q9NX63 RNU7-180P-201ENST00000459240 63 ntBASIC2.38□□□□□ -2.03
CHCHD3Q9NX63 S100A11P2-201ENST00000467589 312 ntBASIC2.38□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms