Protein–RNA interactions for Protein: Q9NSD5

SLC6A13, Sodium- and chloride-dependent GABA transporter 2, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13Q9NSD5 AC138915.1-201ENST00000565427 1685 ntBASIC2.75□□□□□ -1.97
SLC6A13Q9NSD5 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
SLC6A13Q9NSD5 RBBP8P1-201ENST00000449447 1844 ntBASIC2.75□□□□□ -1.97
SLC6A13Q9NSD5 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 AL109809.4-201ENST00000603520 2185 ntBASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 RPL9P7-201ENST00000330965 580 ntBASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 RNU6-105P-201ENST00000363909 104 ntBASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 RNU6-128P-201ENST00000383976 107 ntBASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 RNU6-214P-201ENST00000384130 107 ntBASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 MIR128-1-201ENST00000384921 82 ntBASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 MT-TL1-201ENST00000386347 75 ntBASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 AL513475.1-201ENST00000406602 315 ntBASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 AC074117.2-201ENST00000417130 397 ntBASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 AL139281.1-201ENST00000422120 335 ntBASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 AC006028.1-201ENST00000438379 402 ntBASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 AL513043.1-201ENST00000439124 535 ntBASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 RPL7P43-201ENST00000478876 753 ntBASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 AC025465.4-201ENST00000513422 638 ntBASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 SNORA31.23-201ENST00000517219 133 ntBASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 AC010186.2-204ENST00000537668 439 ntBASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 AC100830.2-201ENST00000581636 240 ntBASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 AC021646.1-201ENST00000605469 484 ntBASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 YPEL5P2-201ENST00000605553 359 ntBASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 MIR8057-201ENST00000620957 69 ntBASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 MIR7515-201ENST00000637837 67 ntBASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
SLC6A13Q9NSD5 MTND5P30-201ENST00000452896 1731 ntBASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 RNU6-1252P-201ENST00000363054 104 ntBASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 RNU6-527P-201ENST00000363425 104 ntBASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 Y_RNA.160-201ENST00000363677 92 ntBASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 RNU6-827P-201ENST00000365553 106 ntBASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 SNORA32.2-201ENST00000384049 122 ntBASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 VN1R36P-201ENST00000414936 291 ntBASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 AL591043.1-201ENST00000432461 424 ntBASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 AC133134.1-201ENST00000466800 359 ntBASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 AP001025.1-201ENST00000486139 332 ntBASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 RNU6-1332P-201ENST00000516666 104 ntBASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 RNU6-256P-201ENST00000516747 97 ntBASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 RN7SKP256-201ENST00000517201 314 ntBASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 AC107953.1-201ENST00000522216 297 ntBASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 AC087241.2-201ENST00000535801 324 ntBASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 HSPE1P20-201ENST00000538133 289 ntBASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 AC012493.2-201ENST00000595083 291 ntBASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 VN1R107P-201ENST00000601784 209 ntBASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 AL121917.1-203ENST00000605534 577 ntBASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 RPL23AP88-201ENST00000605759 454 ntBASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 AC090115.4-201ENST00000609970 188 ntBASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 AL359854.1-201ENST00000614203 1594 ntBASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 AC010329.5-201ENST00000623497 2174 ntBASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.73□□□□□ -1.97
SLC6A13Q9NSD5 MAPK10-266ENST00000641066 6555 ntBASIC2.72□□□□□ -1.97
SLC6A13Q9NSD5 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SLC6A13Q9NSD5 SNORD56.1-201ENST00000362913 68 ntBASIC2.72□□□□□ -1.97
SLC6A13Q9NSD5 RNU6-428P-201ENST00000362942 107 ntBASIC2.72□□□□□ -1.97
SLC6A13Q9NSD5 RNU6-336P-201ENST00000364891 107 ntBASIC2.72□□□□□ -1.97
SLC6A13Q9NSD5 RNU6-1329P-201ENST00000365664 107 ntBASIC2.72□□□□□ -1.97
SLC6A13Q9NSD5 Y_RNA.390-201ENST00000383932 102 ntBASIC2.72□□□□□ -1.97
SLC6A13Q9NSD5 RNU6-622P-201ENST00000384272 103 ntBASIC2.72□□□□□ -1.97
SLC6A13Q9NSD5 RNU6-831P-201ENST00000384548 107 ntBASIC2.72□□□□□ -1.97
SLC6A13Q9NSD5 RNU6-1106P-201ENST00000390845 107 ntBASIC2.72□□□□□ -1.97
SLC6A13Q9NSD5 RNU6-510P-201ENST00000391239 108 ntBASIC2.72□□□□□ -1.97
SLC6A13Q9NSD5 RPS29P13-201ENST00000402041 169 ntBASIC2.72□□□□□ -1.97
SLC6A13Q9NSD5 AC096664.2-201ENST00000411843 406 ntBASIC2.72□□□□□ -1.97
SLC6A13Q9NSD5 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.72□□□□□ -1.97
SLC6A13Q9NSD5 UBE2V1P4-201ENST00000425374 344 ntBASIC2.72□□□□□ -1.97
SLC6A13Q9NSD5 MTCO3P46-201ENST00000425787 232 ntBASIC2.72□□□□□ -1.97
SLC6A13Q9NSD5 RPS15AP10-201ENST00000432472 382 ntBASIC2.72□□□□□ -1.97
SLC6A13Q9NSD5 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.72□□□□□ -1.97
SLC6A13Q9NSD5 MTCO2P3-201ENST00000442543 421 ntBASIC2.72□□□□□ -1.97
SLC6A13Q9NSD5 RPL7P12-201ENST00000446719 750 ntBASIC2.72□□□□□ -1.97
SLC6A13Q9NSD5 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.72□□□□□ -1.97
SLC6A13Q9NSD5 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.72□□□□□ -1.97
SLC6A13Q9NSD5 RNU6-864P-201ENST00000516256 108 ntBASIC2.72□□□□□ -1.97
SLC6A13Q9NSD5 AC118273.2-201ENST00000532092 465 ntBASIC2.72□□□□□ -1.97
SLC6A13Q9NSD5 AP000889.2-201ENST00000532684 490 ntBASIC2.72□□□□□ -1.97
SLC6A13Q9NSD5 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.72□□□□□ -1.97
SLC6A13Q9NSD5 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.72□□□□□ -1.97
SLC6A13Q9NSD5 AC011712.1-201ENST00000588959 234 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms