Protein–RNA interactions for Protein: Q9NQT5

EXOSC3, Exosome complex component RRP40, humanhuman

Known RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3Q9NQT5 RNU2-69P-201ENST00000516061 100 ntBASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 AC105245.1-201ENST00000581934 244 ntBASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 MIR3616-201ENST00000584070 92 ntBASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 MIR4658-201ENST00000584344 65 ntBASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 AC069294.1-201ENST00000608397 350 ntBASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 AP001596.2-201ENST00000608410 312 ntBASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 AC093788.1-201ENST00000609356 927 ntBASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 AC009831.4-201ENST00000620744 325 ntBASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 AC005609.4-201ENST00000625071 447 ntBASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 SCARNA4-202ENST00000625402 129 ntBASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 AP000553.5-201ENST00000641933 54 ntBASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 AL354685.2-201ENST00000448218 1447 ntBASIC2.07□□□□□ -2.08
EXOSC3Q9NQT5 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 AC006020.1-201ENST00000420179 1854 ntBASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 AL139276.1-201ENST00000311910 1001 ntBASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 AC138393.1-203ENST00000327086 343 ntBASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 Y_RNA.324-201ENST00000365165 102 ntBASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 MIR634-201ENST00000385208 97 ntBASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 AC090515.1-201ENST00000465295 476 ntBASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 RPL9P6-201ENST00000492764 598 ntBASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 RPL22P13-201ENST00000493291 347 ntBASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 RNU5B-3P-201ENST00000516601 115 ntBASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 SNORA43.2-201ENST00000516652 128 ntBASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 AP000889.2-201ENST00000532684 490 ntBASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 AC023824.2-201ENST00000566185 400 ntBASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 AC004223.2-201ENST00000590309 544 ntBASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 RPS15AP11-201ENST00000594193 385 ntBASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 AL136363.2-201ENST00000604173 851 ntBASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 AC021646.1-201ENST00000605469 484 ntBASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 HMGB1P24-202ENST00000615653 685 ntBASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 AC068792.1-201ENST00000621354 417 ntBASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 AC022418.1-201ENST00000624118 445 ntBASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 AC135776.4-201ENST00000624300 1904 ntBASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
EXOSC3Q9NQT5 RNA5SP125-201ENST00000364843 120 ntBASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 RNU6-843P-201ENST00000384454 104 ntBASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 Y_RNA.517-201ENST00000384551 106 ntBASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 SNORA48.3-201ENST00000391081 134 ntBASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 HMGB3P2-201ENST00000411913 584 ntBASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 UBE2V1P10-201ENST00000414685 269 ntBASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 AC138623.1-201ENST00000418060 216 ntBASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 DNAJC19P4-201ENST00000440115 345 ntBASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 RPL7P12-201ENST00000446719 750 ntBASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 FDX1P2-201ENST00000450769 375 ntBASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 AL163973.1-201ENST00000484753 577 ntBASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 AC140059.1-201ENST00000489238 361 ntBASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 AC107401.1-201ENST00000503426 685 ntBASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 RNA5SP200-201ENST00000516360 103 ntBASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 AL137161.1-201ENST00000532231 390 ntBASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 AC079598.5-201ENST00000547460 117 ntBASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 MIR5571-201ENST00000577998 113 ntBASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 AC078795.2-201ENST00000602835 1252 ntBASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 AC002044.1-201ENST00000606707 158 ntBASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 RMST_7.1-201ENST00000621935 268 ntBASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 AP003400.5-201ENST00000624827 617 ntBASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 SCARNA15.3-201ENST00000626315 122 ntBASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 SCARNA4.1-201ENST00000628597 123 ntBASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 MIR3529-201ENST00000637713 78 ntBASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 MTND4P14-201ENST00000435799 1354 ntBASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
EXOSC3Q9NQT5 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 Y_RNA.41-201ENST00000362646 102 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 RNU6-37P-201ENST00000362692 107 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 RNU6-78P-201ENST00000362897 107 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 SNORD56.1-201ENST00000362913 68 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 RNU6-11P-201ENST00000364234 107 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 RNU6-25P-201ENST00000383873 107 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 RNU6-1-201ENST00000383898 107 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 RNU6-48P-201ENST00000384161 107 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 RNU6-36P-201ENST00000384172 107 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 RNU6-4P-201ENST00000384205 107 ntBASIC2.04□□□□□ -2.08
EXOSC3Q9NQT5 RNU6-5P-201ENST00000384238 107 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 155.4 ms