Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 IGHVIII-44-202ENST00000636235 289 ntBASIC4.04□□□□□ -1.76
SSU72Q9NP77 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
SSU72Q9NP77 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.04□□□□□ -1.76
SSU72Q9NP77 MAPK10-372ENST00000641954 3413 ntBASIC4.04□□□□□ -1.76
SSU72Q9NP77 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.04□□□□□ -1.76
SSU72Q9NP77 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.04□□□□□ -1.76
SSU72Q9NP77 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.04□□□□□ -1.76
SSU72Q9NP77 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.04□□□□□ -1.76
SSU72Q9NP77 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
SSU72Q9NP77 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSU72Q9NP77 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.03□□□□□ -1.76
SSU72Q9NP77 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.03□□□□□ -1.76
SSU72Q9NP77 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSU72Q9NP77 SNORA25.1-201ENST00000362326 128 ntBASIC4.03□□□□□ -1.76
SSU72Q9NP77 RNU6-704P-201ENST00000364162 103 ntBASIC4.03□□□□□ -1.76
SSU72Q9NP77 RNU6-1175P-201ENST00000365200 107 ntBASIC4.03□□□□□ -1.76
SSU72Q9NP77 RNU6-541P-201ENST00000384709 110 ntBASIC4.03□□□□□ -1.76
SSU72Q9NP77 MIR613-201ENST00000385248 95 ntBASIC4.03□□□□□ -1.76
SSU72Q9NP77 U3.19-201ENST00000390893 196 ntBASIC4.03□□□□□ -1.76
SSU72Q9NP77 RHEBP3-201ENST00000411920 351 ntBASIC4.03□□□□□ -1.76
SSU72Q9NP77 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.03□□□□□ -1.76
SSU72Q9NP77 AC009237.7-201ENST00000447357 229 ntBASIC4.03□□□□□ -1.76
SSU72Q9NP77 NUTF2P3-201ENST00000448540 384 ntBASIC4.03□□□□□ -1.76
SSU72Q9NP77 AP000705.1-201ENST00000454567 350 ntBASIC4.03□□□□□ -1.76
SSU72Q9NP77 AC006026.2-201ENST00000457376 180 ntBASIC4.03□□□□□ -1.76
SSU72Q9NP77 AC078817.1-201ENST00000492623 435 ntBASIC4.03□□□□□ -1.76
SSU72Q9NP77 RN7SL810P-201ENST00000493031 276 ntBASIC4.03□□□□□ -1.76
SSU72Q9NP77 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.03□□□□□ -1.76
SSU72Q9NP77 RNA5SP49-201ENST00000516450 115 ntBASIC4.03□□□□□ -1.76
SSU72Q9NP77 RNU6-1282P-201ENST00000516735 96 ntBASIC4.03□□□□□ -1.76
SSU72Q9NP77 TRAV8-5-201ENST00000537369 341 ntBASIC4.03□□□□□ -1.76
SSU72Q9NP77 HSPE1P5-201ENST00000561489 272 ntBASIC4.03□□□□□ -1.76
SSU72Q9NP77 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.03□□□□□ -1.76
SSU72Q9NP77 MIR3144-201ENST00000579460 79 ntBASIC4.03□□□□□ -1.76
SSU72Q9NP77 MIR4308-201ENST00000580634 81 ntBASIC4.03□□□□□ -1.76
SSU72Q9NP77 AL356157.2-201ENST00000605122 111 ntBASIC4.03□□□□□ -1.76
SSU72Q9NP77 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSU72Q9NP77 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.03□□□□□ -1.76
SSU72Q9NP77 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.03□□□□□ -1.76
SSU72Q9NP77 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSU72Q9NP77 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
SSU72Q9NP77 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
SSU72Q9NP77 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC4.03□□□□□ -1.76
SSU72Q9NP77 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
SSU72Q9NP77 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.03□□□□□ -1.77
SSU72Q9NP77 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.02□□□□□ -1.77
SSU72Q9NP77 MIR423-201ENST00000362201 94 ntBASIC4.02□□□□□ -1.77
SSU72Q9NP77 RNU6-137P-201ENST00000363680 108 ntBASIC4.02□□□□□ -1.77
SSU72Q9NP77 SNORD115-8-201ENST00000363856 82 ntBASIC4.02□□□□□ -1.77
SSU72Q9NP77 SNORA7.2-201ENST00000364446 145 ntBASIC4.02□□□□□ -1.77
SSU72Q9NP77 RNU6-923P-201ENST00000364753 107 ntBASIC4.02□□□□□ -1.77
SSU72Q9NP77 SNORD115-38-201ENST00000365037 82 ntBASIC4.02□□□□□ -1.77
SSU72Q9NP77 RNU1-140P-201ENST00000365040 165 ntBASIC4.02□□□□□ -1.77
SSU72Q9NP77 AL645927.1-201ENST00000396783 406 ntBASIC4.02□□□□□ -1.77
SSU72Q9NP77 FTH1P15-201ENST00000406984 280 ntBASIC4.02□□□□□ -1.77
SSU72Q9NP77 RNU6-1135P-201ENST00000411083 103 ntBASIC4.02□□□□□ -1.77
SSU72Q9NP77 AL512844.2-201ENST00000433990 593 ntBASIC4.02□□□□□ -1.77
SSU72Q9NP77 NDUFB4P6-201ENST00000436819 366 ntBASIC4.02□□□□□ -1.77
SSU72Q9NP77 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC4.02□□□□□ -1.77
SSU72Q9NP77 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.02□□□□□ -1.77
SSU72Q9NP77 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC4.02□□□□□ -1.77
SSU72Q9NP77 AC091021.1-201ENST00000468051 388 ntBASIC4.02□□□□□ -1.77
SSU72Q9NP77 RPS4XP22-201ENST00000480755 780 ntBASIC4.02□□□□□ -1.77
SSU72Q9NP77 RPL30P5-201ENST00000494923 336 ntBASIC4.02□□□□□ -1.77
SSU72Q9NP77 AC020593.1-201ENST00000507399 299 ntBASIC4.02□□□□□ -1.77
SSU72Q9NP77 SNORA40.9-201ENST00000515895 93 ntBASIC4.02□□□□□ -1.77
SSU72Q9NP77 Y_RNA.679-201ENST00000516416 91 ntBASIC4.02□□□□□ -1.77
SSU72Q9NP77 Vault.1-201ENST00000516474 102 ntBASIC4.02□□□□□ -1.77
SSU72Q9NP77 SNORA31.23-201ENST00000517219 133 ntBASIC4.02□□□□□ -1.77
SSU72Q9NP77 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SSU72Q9NP77 MIR5684-201ENST00000585074 65 ntBASIC4.02□□□□□ -1.77
SSU72Q9NP77 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.02□□□□□ -1.77
SSU72Q9NP77 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.02□□□□□ -1.77
SSU72Q9NP77 AL713866.2-201ENST00000603579 219 ntBASIC4.02□□□□□ -1.77
SSU72Q9NP77 AC037487.3-201ENST00000606668 112 ntBASIC4.02□□□□□ -1.77
SSU72Q9NP77 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC4.02□□□□□ -1.77
SSU72Q9NP77 MIR6886-201ENST00000619864 61 ntBASIC4.02□□□□□ -1.77
SSU72Q9NP77 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
SSU72Q9NP77 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SSU72Q9NP77 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
SSU72Q9NP77 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.02□□□□□ -1.77
SSU72Q9NP77 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SSU72Q9NP77 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.02□□□□□ -1.77
SSU72Q9NP77 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
SSU72Q9NP77 SRP72P2-201ENST00000344851 1979 ntBASIC4.02□□□□□ -1.77
SSU72Q9NP77 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
SSU72Q9NP77 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.01□□□□□ -1.77
SSU72Q9NP77 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
SSU72Q9NP77 Z82217.1-201ENST00000625157 8149 ntBASIC4.01□□□□□ -1.77
SSU72Q9NP77 SNORA60-201ENST00000362396 134 ntBASIC4.01□□□□□ -1.77
SSU72Q9NP77 SNORD50.2-201ENST00000365465 70 ntBASIC4.01□□□□□ -1.77
SSU72Q9NP77 RNU6-213P-201ENST00000384051 104 ntBASIC4.01□□□□□ -1.77
SSU72Q9NP77 U3.39-201ENST00000408569 239 ntBASIC4.01□□□□□ -1.77
SSU72Q9NP77 ELOCP19-201ENST00000411919 318 ntBASIC4.01□□□□□ -1.77
SSU72Q9NP77 RPL26P27-201ENST00000414397 437 ntBASIC4.01□□□□□ -1.77
SSU72Q9NP77 RPEP3-201ENST00000425462 676 ntBASIC4.01□□□□□ -1.77
SSU72Q9NP77 AC083863.1-201ENST00000438811 231 ntBASIC4.01□□□□□ -1.77
SSU72Q9NP77 HMGB1P37-201ENST00000439613 609 ntBASIC4.01□□□□□ -1.77
SSU72Q9NP77 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.01□□□□□ -1.77
SSU72Q9NP77 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms