Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC4.5□□□□□ -1.69
ZFYVE28Q9HCC9 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.5□□□□□ -1.69
ZFYVE28Q9HCC9 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.5□□□□□ -1.69
ZFYVE28Q9HCC9 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.5□□□□□ -1.69
ZFYVE28Q9HCC9 AL137100.2-201ENST00000555786 315 ntBASIC4.5□□□□□ -1.69
ZFYVE28Q9HCC9 AC023824.2-201ENST00000566185 400 ntBASIC4.5□□□□□ -1.69
ZFYVE28Q9HCC9 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.5□□□□□ -1.69
ZFYVE28Q9HCC9 RPL23AP88-201ENST00000605759 454 ntBASIC4.5□□□□□ -1.69
ZFYVE28Q9HCC9 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ZFYVE28Q9HCC9 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
ZFYVE28Q9HCC9 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
ZFYVE28Q9HCC9 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
ZFYVE28Q9HCC9 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
ZFYVE28Q9HCC9 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
ZFYVE28Q9HCC9 RNU6-600P-201ENST00000362524 99 ntBASIC4.49□□□□□ -1.69
ZFYVE28Q9HCC9 Y_RNA.277-201ENST00000364754 102 ntBASIC4.49□□□□□ -1.69
ZFYVE28Q9HCC9 RNA5SP267-201ENST00000364893 126 ntBASIC4.49□□□□□ -1.69
ZFYVE28Q9HCC9 RNU6-898P-201ENST00000365627 104 ntBASIC4.49□□□□□ -1.69
ZFYVE28Q9HCC9 RNU6-1286P-201ENST00000383871 107 ntBASIC4.49□□□□□ -1.69
ZFYVE28Q9HCC9 RNU6-217P-201ENST00000384164 104 ntBASIC4.49□□□□□ -1.69
ZFYVE28Q9HCC9 RNU6-843P-201ENST00000384454 104 ntBASIC4.49□□□□□ -1.69
ZFYVE28Q9HCC9 MIR32-201ENST00000384965 70 ntBASIC4.49□□□□□ -1.69
ZFYVE28Q9HCC9 MIR548M-201ENST00000408260 86 ntBASIC4.49□□□□□ -1.69
ZFYVE28Q9HCC9 RNU2-20P-201ENST00000410425 191 ntBASIC4.49□□□□□ -1.69
ZFYVE28Q9HCC9 Y_RNA.602-201ENST00000410535 92 ntBASIC4.49□□□□□ -1.69
ZFYVE28Q9HCC9 RN7SKP167-201ENST00000411047 285 ntBASIC4.49□□□□□ -1.69
ZFYVE28Q9HCC9 AC010469.1-201ENST00000463864 576 ntBASIC4.49□□□□□ -1.69
ZFYVE28Q9HCC9 RPS29P2-201ENST00000479278 136 ntBASIC4.49□□□□□ -1.69
ZFYVE28Q9HCC9 RN7SL271P-201ENST00000487601 295 ntBASIC4.49□□□□□ -1.69
ZFYVE28Q9HCC9 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ZFYVE28Q9HCC9 AC073657.2-201ENST00000605661 303 ntBASIC4.49□□□□□ -1.69
ZFYVE28Q9HCC9 AC024581.2-201ENST00000619986 252 ntBASIC4.49□□□□□ -1.69
ZFYVE28Q9HCC9 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
ZFYVE28Q9HCC9 MIR3651-201ENST00000630427 90 ntBASIC4.49□□□□□ -1.69
ZFYVE28Q9HCC9 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
ZFYVE28Q9HCC9 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
ZFYVE28Q9HCC9 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
ZFYVE28Q9HCC9 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 AL079305.1-201ENST00000623159 3008 ntBASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 RNU6-50P-201ENST00000362356 103 ntBASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 Y_RNA.16-201ENST00000362421 102 ntBASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 RNU6-222P-201ENST00000362438 107 ntBASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 RNU6-1266P-201ENST00000362794 105 ntBASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 SNORD113-8-201ENST00000363497 74 ntBASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 SNORD115-32-201ENST00000364079 82 ntBASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 MIR518D-201ENST00000385014 87 ntBASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 RPL26P27-201ENST00000414397 437 ntBASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 HMGN2P30-201ENST00000423237 256 ntBASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 AC098831.1-201ENST00000440661 216 ntBASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 AC243964.1-201ENST00000441814 261 ntBASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 RPL37P4-201ENST00000448908 268 ntBASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 BX510359.1-201ENST00000456973 237 ntBASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 RPL23AP14-201ENST00000468281 468 ntBASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 SCARNA24.2-201ENST00000516968 130 ntBASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 H3F3AP1-201ENST00000559984 334 ntBASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 AC015813.4-201ENST00000610469 179 ntBASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 U2.21-201ENST00000637295 81 ntBASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 AC087190.4-201ENST00000574616 8334 ntBASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 AL353743.1-202ENST00000431724 1695 ntBASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.48□□□□□ -1.69
ZFYVE28Q9HCC9 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
ZFYVE28Q9HCC9 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ZFYVE28Q9HCC9 RNU6-942P-201ENST00000363002 107 ntBASIC4.47□□□□□ -1.69
ZFYVE28Q9HCC9 RNU6-778P-201ENST00000363269 103 ntBASIC4.47□□□□□ -1.69
ZFYVE28Q9HCC9 Y_RNA.297-201ENST00000364950 91 ntBASIC4.47□□□□□ -1.69
ZFYVE28Q9HCC9 RNU1-73P-201ENST00000383971 164 ntBASIC4.47□□□□□ -1.69
ZFYVE28Q9HCC9 RNU6-142P-201ENST00000384019 107 ntBASIC4.47□□□□□ -1.69
ZFYVE28Q9HCC9 RNU6-937P-201ENST00000384325 106 ntBASIC4.47□□□□□ -1.69
ZFYVE28Q9HCC9 Y_RNA.541-201ENST00000384640 113 ntBASIC4.47□□□□□ -1.69
ZFYVE28Q9HCC9 MIR153-2-201ENST00000385225 87 ntBASIC4.47□□□□□ -1.69
ZFYVE28Q9HCC9 MIR1251-201ENST00000408552 70 ntBASIC4.47□□□□□ -1.69
ZFYVE28Q9HCC9 NDUFB4P6-201ENST00000436819 366 ntBASIC4.47□□□□□ -1.69
ZFYVE28Q9HCC9 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC4.47□□□□□ -1.69
ZFYVE28Q9HCC9 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.47□□□□□ -1.69
ZFYVE28Q9HCC9 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.47□□□□□ -1.69
ZFYVE28Q9HCC9 AL138752.1-201ENST00000452964 351 ntBASIC4.47□□□□□ -1.69
ZFYVE28Q9HCC9 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.47□□□□□ -1.69
ZFYVE28Q9HCC9 RPL30P1-201ENST00000488676 339 ntBASIC4.47□□□□□ -1.69
ZFYVE28Q9HCC9 AC005921.1-201ENST00000510589 286 ntBASIC4.47□□□□□ -1.69
ZFYVE28Q9HCC9 RNA5SP164-201ENST00000516533 110 ntBASIC4.47□□□□□ -1.69
ZFYVE28Q9HCC9 RN7SKP57-201ENST00000517248 293 ntBASIC4.47□□□□□ -1.69
ZFYVE28Q9HCC9 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.47□□□□□ -1.69
ZFYVE28Q9HCC9 AC020895.1-201ENST00000595362 272 ntBASIC4.47□□□□□ -1.69
ZFYVE28Q9HCC9 AC011476.5-201ENST00000615594 130 ntBASIC4.47□□□□□ -1.69
ZFYVE28Q9HCC9 SCARNA15.3-201ENST00000626315 122 ntBASIC4.47□□□□□ -1.69
ZFYVE28Q9HCC9 SCARNA4.1-201ENST00000628597 123 ntBASIC4.47□□□□□ -1.69
ZFYVE28Q9HCC9 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
ZFYVE28Q9HCC9 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
ZFYVE28Q9HCC9 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms