Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.98□□□□□ -1.93
USP44Q9H0E7 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.98□□□□□ -1.93
USP44Q9H0E7 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
USP44Q9H0E7 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
USP44Q9H0E7 AC138393.1-203ENST00000327086 343 ntBASIC2.97□□□□□ -1.93
USP44Q9H0E7 RNY3P3-201ENST00000363816 102 ntBASIC2.97□□□□□ -1.93
USP44Q9H0E7 Y_RNA.248-201ENST00000364501 109 ntBASIC2.97□□□□□ -1.93
USP44Q9H0E7 RNA5SP126-201ENST00000365092 109 ntBASIC2.97□□□□□ -1.93
USP44Q9H0E7 RNU6-898P-201ENST00000365627 104 ntBASIC2.97□□□□□ -1.93
USP44Q9H0E7 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
USP44Q9H0E7 SNORD37.1-201ENST00000390968 65 ntBASIC2.97□□□□□ -1.93
USP44Q9H0E7 MIR887-201ENST00000401258 79 ntBASIC2.97□□□□□ -1.93
USP44Q9H0E7 MIR1277-201ENST00000408536 78 ntBASIC2.97□□□□□ -1.93
USP44Q9H0E7 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC2.97□□□□□ -1.93
USP44Q9H0E7 SNRPEP10-201ENST00000420249 274 ntBASIC2.97□□□□□ -1.93
USP44Q9H0E7 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC2.97□□□□□ -1.93
USP44Q9H0E7 SAR1AP4-201ENST00000429225 591 ntBASIC2.97□□□□□ -1.93
USP44Q9H0E7 AL365400.1-201ENST00000431854 640 ntBASIC2.97□□□□□ -1.93
USP44Q9H0E7 MTCO3P38-201ENST00000468910 766 ntBASIC2.97□□□□□ -1.93
USP44Q9H0E7 AC107626.1-201ENST00000471084 183 ntBASIC2.97□□□□□ -1.93
USP44Q9H0E7 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.97□□□□□ -1.93
USP44Q9H0E7 FAM92A1P2-202ENST00000504766 877 ntBASIC2.97□□□□□ -1.93
USP44Q9H0E7 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.97□□□□□ -1.93
USP44Q9H0E7 RNU5B-3P-201ENST00000516601 115 ntBASIC2.97□□□□□ -1.93
USP44Q9H0E7 CYCSP27-201ENST00000527643 293 ntBASIC2.97□□□□□ -1.93
USP44Q9H0E7 CR383656.8-201ENST00000549046 145 ntBASIC2.97□□□□□ -1.93
USP44Q9H0E7 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC2.97□□□□□ -1.93
USP44Q9H0E7 MIR3616-201ENST00000584070 92 ntBASIC2.97□□□□□ -1.93
USP44Q9H0E7 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC2.97□□□□□ -1.93
USP44Q9H0E7 AP000907.4-201ENST00000604143 237 ntBASIC2.97□□□□□ -1.93
USP44Q9H0E7 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.97□□□□□ -1.93
USP44Q9H0E7 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.97□□□□□ -1.93
USP44Q9H0E7 MIR3529-201ENST00000637713 78 ntBASIC2.97□□□□□ -1.93
USP44Q9H0E7 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.96□□□□□ -1.93
USP44Q9H0E7 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
USP44Q9H0E7 RNU6-451P-201ENST00000362921 107 ntBASIC2.96□□□□□ -1.94
USP44Q9H0E7 SNORA25.6-201ENST00000364121 118 ntBASIC2.96□□□□□ -1.94
USP44Q9H0E7 RNU6-384P-201ENST00000364900 104 ntBASIC2.96□□□□□ -1.94
USP44Q9H0E7 U8.8-201ENST00000365399 135 ntBASIC2.96□□□□□ -1.94
USP44Q9H0E7 MIR147B-201ENST00000390185 80 ntBASIC2.96□□□□□ -1.94
USP44Q9H0E7 SNORA26.7-201ENST00000391288 122 ntBASIC2.96□□□□□ -1.94
USP44Q9H0E7 RNU2-3P-201ENST00000410144 191 ntBASIC2.96□□□□□ -1.94
USP44Q9H0E7 AL139415.2-201ENST00000431968 163 ntBASIC2.96□□□□□ -1.94
USP44Q9H0E7 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.96□□□□□ -1.94
USP44Q9H0E7 AC092001.1-201ENST00000453012 261 ntBASIC2.96□□□□□ -1.94
USP44Q9H0E7 AC233279.1-201ENST00000455300 423 ntBASIC2.96□□□□□ -1.94
USP44Q9H0E7 RPS27AP9-201ENST00000477681 438 ntBASIC2.96□□□□□ -1.94
USP44Q9H0E7 MTND3P25-201ENST00000509243 135 ntBASIC2.96□□□□□ -1.94
USP44Q9H0E7 AL117351.2-201ENST00000513571 157 ntBASIC2.96□□□□□ -1.94
USP44Q9H0E7 ACA59.2-201ENST00000517061 156 ntBASIC2.96□□□□□ -1.94
USP44Q9H0E7 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
USP44Q9H0E7 AC005858.4-201ENST00000623191 700 ntBASIC2.96□□□□□ -1.94
USP44Q9H0E7 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
USP44Q9H0E7 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
USP44Q9H0E7 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
USP44Q9H0E7 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.95□□□□□ -1.94
USP44Q9H0E7 Y_RNA.295-201ENST00000364918 102 ntBASIC2.95□□□□□ -1.94
USP44Q9H0E7 RNU6-487P-201ENST00000365430 104 ntBASIC2.95□□□□□ -1.94
USP44Q9H0E7 RNU4-20P-201ENST00000365601 151 ntBASIC2.95□□□□□ -1.94
USP44Q9H0E7 SNORA16.2-201ENST00000390991 127 ntBASIC2.95□□□□□ -1.94
USP44Q9H0E7 CYCSP33-201ENST00000414485 327 ntBASIC2.95□□□□□ -1.94
USP44Q9H0E7 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC2.95□□□□□ -1.94
USP44Q9H0E7 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC2.95□□□□□ -1.94
USP44Q9H0E7 MICF-203ENST00000432679 129 ntBASIC2.95□□□□□ -1.94
USP44Q9H0E7 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.95□□□□□ -1.94
USP44Q9H0E7 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.95□□□□□ -1.94
USP44Q9H0E7 RPS29P25-201ENST00000481709 171 ntBASIC2.95□□□□□ -1.94
USP44Q9H0E7 RNU1-86P-201ENST00000516108 154 ntBASIC2.95□□□□□ -1.94
USP44Q9H0E7 RNU1-107P-201ENST00000516617 154 ntBASIC2.95□□□□□ -1.94
USP44Q9H0E7 SNORA31.18-201ENST00000517043 134 ntBASIC2.95□□□□□ -1.94
USP44Q9H0E7 AC109479.2-201ENST00000517842 174 ntBASIC2.95□□□□□ -1.94
USP44Q9H0E7 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.95□□□□□ -1.94
USP44Q9H0E7 GLYCAM1-201ENST00000546596 285 ntBASIC2.95□□□□□ -1.94
USP44Q9H0E7 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.95□□□□□ -1.94
USP44Q9H0E7 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.95□□□□□ -1.94
USP44Q9H0E7 SNORA59B-202ENST00000578183 701 ntBASIC2.95□□□□□ -1.94
USP44Q9H0E7 AC005261.5-201ENST00000596280 355 ntBASIC2.95□□□□□ -1.94
USP44Q9H0E7 AL670379.10-201ENST00000604330 253 ntBASIC2.95□□□□□ -1.94
USP44Q9H0E7 AL670379.9-201ENST00000605428 253 ntBASIC2.95□□□□□ -1.94
USP44Q9H0E7 AC104458.1-201ENST00000608243 463 ntBASIC2.95□□□□□ -1.94
USP44Q9H0E7 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.95□□□□□ -1.94
USP44Q9H0E7 AC004520.1-201ENST00000608362 1413 ntBASIC2.94□□□□□ -1.94
USP44Q9H0E7 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
USP44Q9H0E7 SNORD3E-201ENST00000362899 217 ntBASIC2.94□□□□□ -1.94
USP44Q9H0E7 Y_RNA.324-201ENST00000365165 102 ntBASIC2.94□□□□□ -1.94
USP44Q9H0E7 RNU6-38P-201ENST00000384085 107 ntBASIC2.94□□□□□ -1.94
USP44Q9H0E7 AL445529.1-201ENST00000398713 389 ntBASIC2.94□□□□□ -1.94
USP44Q9H0E7 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.94□□□□□ -1.94
USP44Q9H0E7 OR9R1P-201ENST00000412200 877 ntBASIC2.94□□□□□ -1.94
USP44Q9H0E7 RPL39P40-201ENST00000445481 146 ntBASIC2.94□□□□□ -1.94
USP44Q9H0E7 EEF1B2P7-201ENST00000451177 676 ntBASIC2.94□□□□□ -1.94
USP44Q9H0E7 RNU6-333P-201ENST00000459117 107 ntBASIC2.94□□□□□ -1.94
USP44Q9H0E7 RPL22P13-201ENST00000493291 347 ntBASIC2.94□□□□□ -1.94
USP44Q9H0E7 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.94□□□□□ -1.94
USP44Q9H0E7 CCDC34P1-201ENST00000507441 517 ntBASIC2.94□□□□□ -1.94
USP44Q9H0E7 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
USP44Q9H0E7 MRPS36P2-201ENST00000512569 299 ntBASIC2.94□□□□□ -1.94
USP44Q9H0E7 RNU6-581P-201ENST00000516214 105 ntBASIC2.94□□□□□ -1.94
USP44Q9H0E7 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.94□□□□□ -1.94
USP44Q9H0E7 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms