Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 BTBD7P2-201ENST00000441962 620 ntBASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 AC113347.3-201ENST00000509113 148 ntBASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 AC005776.1-201ENST00000603164 290 ntBASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 AL358072.1-201ENST00000604156 575 ntBASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 MIR8074-201ENST00000615081 81 ntBASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 AC093648.1-201ENST00000623546 606 ntBASIC1.36□□□□□ -2.19
UPF3BQ9BZI7 Y_RNA.67-201ENST00000362870 100 ntBASIC1.35□□□□□ -2.19
UPF3BQ9BZI7 Y_RNA.99-201ENST00000363138 105 ntBASIC1.35□□□□□ -2.19
UPF3BQ9BZI7 RNU4-91P-201ENST00000364778 135 ntBASIC1.35□□□□□ -2.19
UPF3BQ9BZI7 MIR597-201ENST00000384968 97 ntBASIC1.35□□□□□ -2.19
UPF3BQ9BZI7 RN7SKP266-201ENST00000410232 287 ntBASIC1.35□□□□□ -2.19
UPF3BQ9BZI7 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC1.35□□□□□ -2.19
UPF3BQ9BZI7 MTCO3P5-201ENST00000433620 714 ntBASIC1.35□□□□□ -2.19
UPF3BQ9BZI7 MTCO1P44-201ENST00000441935 243 ntBASIC1.35□□□□□ -2.19
UPF3BQ9BZI7 AP000542.1-201ENST00000448473 371 ntBASIC1.35□□□□□ -2.19
UPF3BQ9BZI7 RNU6-953P-201ENST00000459154 107 ntBASIC1.35□□□□□ -2.19
UPF3BQ9BZI7 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC1.35□□□□□ -2.19
UPF3BQ9BZI7 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC1.35□□□□□ -2.19
UPF3BQ9BZI7 SNORA31.19-201ENST00000517079 126 ntBASIC1.35□□□□□ -2.19
UPF3BQ9BZI7 COPS8P3-201ENST00000526024 482 ntBASIC1.35□□□□□ -2.19
UPF3BQ9BZI7 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.35□□□□□ -2.19
UPF3BQ9BZI7 NTS-203ENST00000551529 801 ntTSL 3 BASIC1.35□□□□□ -2.19
UPF3BQ9BZI7 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.35□□□□□ -2.19
UPF3BQ9BZI7 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC1.35□□□□□ -2.19
UPF3BQ9BZI7 BNIP3P26-201ENST00000600827 554 ntBASIC1.35□□□□□ -2.19
UPF3BQ9BZI7 RPL21P136-201ENST00000605378 396 ntBASIC1.35□□□□□ -2.19
UPF3BQ9BZI7 AC123912.5-201ENST00000605470 343 ntBASIC1.35□□□□□ -2.19
UPF3BQ9BZI7 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC1.35□□□□□ -2.19
UPF3BQ9BZI7 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.35□□□□□ -2.19
UPF3BQ9BZI7 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.35□□□□□ -2.19
UPF3BQ9BZI7 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
UPF3BQ9BZI7 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
UPF3BQ9BZI7 RNU6-289P-201ENST00000364093 107 ntBASIC1.34□□□□□ -2.19
UPF3BQ9BZI7 SNORA40.2-201ENST00000390847 128 ntBASIC1.34□□□□□ -2.19
UPF3BQ9BZI7 MIR1284-201ENST00000408337 120 ntBASIC1.34□□□□□ -2.19
UPF3BQ9BZI7 AL359704.1-201ENST00000411586 781 ntBASIC1.34□□□□□ -2.19
UPF3BQ9BZI7 OR6C66P-201ENST00000414917 930 ntBASIC1.34□□□□□ -2.19
UPF3BQ9BZI7 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC1.34□□□□□ -2.19
UPF3BQ9BZI7 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.34□□□□□ -2.19
UPF3BQ9BZI7 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.34□□□□□ -2.19
UPF3BQ9BZI7 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.34□□□□□ -2.19
UPF3BQ9BZI7 AL445305.1-201ENST00000432577 575 ntBASIC1.34□□□□□ -2.19
UPF3BQ9BZI7 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC1.34□□□□□ -2.19
UPF3BQ9BZI7 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.34□□□□□ -2.19
UPF3BQ9BZI7 MED28P2-201ENST00000475771 317 ntBASIC1.34□□□□□ -2.19
UPF3BQ9BZI7 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC1.34□□□□□ -2.19
UPF3BQ9BZI7 MTCO3P27-201ENST00000514397 196 ntBASIC1.34□□□□□ -2.19
UPF3BQ9BZI7 RNU6-113P-201ENST00000516653 101 ntBASIC1.34□□□□□ -2.19
UPF3BQ9BZI7 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.34□□□□□ -2.19
UPF3BQ9BZI7 AP003392.2-201ENST00000527269 208 ntBASIC1.34□□□□□ -2.19
UPF3BQ9BZI7 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.34□□□□□ -2.19
UPF3BQ9BZI7 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.34□□□□□ -2.19
UPF3BQ9BZI7 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.34□□□□□ -2.19
UPF3BQ9BZI7 USP12-203ENST00000620323 349 ntTSL 3 BASIC1.34□□□□□ -2.19
UPF3BQ9BZI7 AC091948.2-201ENST00000636510 279 ntBASIC1.34□□□□□ -2.19
UPF3BQ9BZI7 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
UPF3BQ9BZI7 MIR26B-201ENST00000362251 77 ntBASIC1.33□□□□□ -2.2
UPF3BQ9BZI7 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.33□□□□□ -2.2
UPF3BQ9BZI7 RNU6-1274P-201ENST00000384557 107 ntBASIC1.33□□□□□ -2.2
UPF3BQ9BZI7 RNY1P4-201ENST00000384595 115 ntBASIC1.33□□□□□ -2.2
UPF3BQ9BZI7 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
UPF3BQ9BZI7 CBX3P9-201ENST00000402326 552 ntBASIC1.33□□□□□ -2.2
UPF3BQ9BZI7 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC1.33□□□□□ -2.2
UPF3BQ9BZI7 USP9YP11-201ENST00000427537 717 ntBASIC1.33□□□□□ -2.2
UPF3BQ9BZI7 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.33□□□□□ -2.2
UPF3BQ9BZI7 MTCO1P27-201ENST00000448269 226 ntBASIC1.33□□□□□ -2.2
UPF3BQ9BZI7 AL590365.1-201ENST00000450788 243 ntBASIC1.33□□□□□ -2.2
UPF3BQ9BZI7 snoU13.14-201ENST00000459372 104 ntBASIC1.33□□□□□ -2.2
UPF3BQ9BZI7 AC087343.1-201ENST00000477341 475 ntBASIC1.33□□□□□ -2.2
UPF3BQ9BZI7 AC099513.1-201ENST00000490423 301 ntBASIC1.33□□□□□ -2.2
UPF3BQ9BZI7 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
UPF3BQ9BZI7 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.33□□□□□ -2.2
UPF3BQ9BZI7 RNA5SP216-201ENST00000516111 123 ntBASIC1.33□□□□□ -2.2
UPF3BQ9BZI7 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.33□□□□□ -2.2
UPF3BQ9BZI7 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.33□□□□□ -2.2
UPF3BQ9BZI7 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC1.33□□□□□ -2.2
UPF3BQ9BZI7 VN1R83P-201ENST00000595685 445 ntBASIC1.33□□□□□ -2.2
UPF3BQ9BZI7 AC104985.3-201ENST00000623479 597 ntBASIC1.33□□□□□ -2.2
UPF3BQ9BZI7 AC092656.1-203ENST00000624134 423 ntBASIC1.33□□□□□ -2.2
UPF3BQ9BZI7 AC092125.1-201ENST00000562568 1995 ntBASIC1.33□□□□□ -2.2
UPF3BQ9BZI7 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
UPF3BQ9BZI7 RNU6-166P-201ENST00000384371 107 ntBASIC1.32□□□□□ -2.2
UPF3BQ9BZI7 MIR216A-201ENST00000385063 110 ntBASIC1.32□□□□□ -2.2
UPF3BQ9BZI7 Y_RNA.578-201ENST00000390903 88 ntBASIC1.32□□□□□ -2.2
UPF3BQ9BZI7 RNU6-278P-201ENST00000390945 109 ntBASIC1.32□□□□□ -2.2
UPF3BQ9BZI7 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms