Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-4Q9BYR3 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-4Q9BYR3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-4Q9BYR3 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC1.31□□□□□ -2.2
KRTAP4-4Q9BYR3 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-4Q9BYR3 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-4Q9BYR3 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-4Q9BYR3 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-4Q9BYR3 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-4Q9BYR3 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC1.31□□□□□ -2.2
KRTAP4-4Q9BYR3 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-4Q9BYR3 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-4Q9BYR3 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-4Q9BYR3 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC1.31□□□□□ -2.2
KRTAP4-4Q9BYR3 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC1.31□□□□□ -2.2
KRTAP4-4Q9BYR3 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-4Q9BYR3 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC1.31□□□□□ -2.2
KRTAP4-4Q9BYR3 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-4Q9BYR3 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC1.31□□□□□ -2.2
KRTAP4-4Q9BYR3 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC1.31□□□□□ -2.2
KRTAP4-4Q9BYR3 IPP-202ENST00000396478 3113 ntAPPRIS P1 TSL 2 BASIC1.31□□□□□ -2.2
KRTAP4-4Q9BYR3 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-4Q9BYR3 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
KRTAP4-4Q9BYR3 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
KRTAP4-4Q9BYR3 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 ADH1B-201ENST00000305046 4072 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 AC112198.2-201ENST00000426589 6996 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 DEFB108F-201ENST00000344638 222 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 RNU6-664P-201ENST00000362381 107 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 RN7SKP36-201ENST00000363997 312 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 RNA5SP79-201ENST00000365193 109 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 RNA5SP238-201ENST00000365464 120 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 AC092634.1-201ENST00000366505 199 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 SNORD101-201ENST00000384027 73 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 SNORA70.7-201ENST00000384159 133 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 SNORA70.8-201ENST00000384231 136 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 Y_RNA.494-201ENST00000384432 111 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 AC090114.1-201ENST00000393266 448 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 HMGN2P39-201ENST00000398005 273 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 AL359511.1-201ENST00000402970 211 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 PPIAP30-201ENST00000415473 519 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 AC099336.2-201ENST00000422457 254 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 AL034379.1-201ENST00000423216 253 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 RPL27AP8-201ENST00000424277 446 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 ARF4P2-201ENST00000430209 526 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 AL157398.1-201ENST00000452981 186 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 AC099560.2-201ENST00000457554 255 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 AC108161.1-201ENST00000461060 402 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 RN7SL251P-201ENST00000464175 297 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 AC090602.1-201ENST00000469695 252 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 RN7SL790P-201ENST00000474043 298 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 RN7SL70P-201ENST00000478322 302 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 RN7SL332P-201ENST00000482163 254 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 RN7SL741P-201ENST00000482473 289 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 RPS27P21-201ENST00000486977 252 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 COX6B1P2-201ENST00000489624 230 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 AC005912.1-201ENST00000495392 255 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 RPL29P14-201ENST00000495837 428 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 AC233724.1-201ENST00000503894 233 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 RNU6-991P-201ENST00000516168 107 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 RNA5SP360-201ENST00000516555 118 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 AL358944.1-201ENST00000528537 144 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 AC022404.1-201ENST00000555320 273 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 AC006349.1-201ENST00000555526 235 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 LINC00933-203ENST00000559812 219 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 AC093249.4-201ENST00000564755 259 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 MIR378C-201ENST00000578683 81 ntBASIC1.3□□□□□ -2.2
KRTAP4-4Q9BYR3 RN7SL32P-201ENST00000580514 281 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms