Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 AC093899.1-201ENST00000457984 376 ntBASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 AL139824.2-201ENST00000458731 1095 ntBASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 RNU6-1092P-201ENST00000516955 87 ntBASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 MIR4498-201ENST00000577599 66 ntBASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 MIR3146-201ENST00000580367 79 ntBASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 KC877982.1-201ENST00000602313 470 ntBASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 snoU13.31-201ENST00000607291 104 ntBASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 uc_338.12-201ENST00000616344 181 ntBASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 AP000484.1-201ENST00000620067 1252 ntBASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CDCA4Q9BXL8 MTND4P16-201ENST00000466108 1367 ntBASIC1.21□□□□□ -2.21
CDCA4Q9BXL8 Y_RNA.99-201ENST00000363138 105 ntBASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 RNU4-13P-201ENST00000364019 141 ntBASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 SNORD26-201ENST00000384147 75 ntBASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 RNU6-843P-201ENST00000384454 104 ntBASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 RNU6-757P-201ENST00000410334 100 ntBASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 UBE2V1P10-201ENST00000414685 269 ntBASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 AC009518.2-201ENST00000418056 731 ntBASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 PTENP1-201ENST00000447117 1215 ntBASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 AC119751.4-201ENST00000507498 357 ntBASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 AC025465.3-201ENST00000510570 311 ntBASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 MTATP6P15-201ENST00000527233 835 ntBASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 AC023050.2-201ENST00000544968 387 ntBASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 AC123904.2-201ENST00000548059 300 ntBASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 DNAJC19P9-201ENST00000555084 351 ntBASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 AC092325.1-201ENST00000566449 554 ntBASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 MIR1273C-201ENST00000578669 77 ntBASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 MIR15A-201ENST00000607334 83 ntBASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 AC012360.2-201ENST00000609349 391 ntBASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 AC004908.3-201ENST00000610248 625 ntBASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 AC009269.6-201ENST00000621778 588 ntBASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 AC093648.1-201ENST00000623546 606 ntBASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 AC091812.1-201ENST00000432235 1948 ntBASIC1.21□□□□□ -2.22
CDCA4Q9BXL8 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 ZNF209P-201ENST00000593450 2304 ntBASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 RNU6-655P-201ENST00000362858 107 ntBASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 RNU4-92P-201ENST00000363783 136 ntBASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 RNU5E-6P-201ENST00000365574 115 ntBASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 RNU6-946P-201ENST00000383878 107 ntBASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 RNU1-78P-201ENST00000391248 165 ntBASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 RNU6-174P-201ENST00000410406 106 ntBASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 TRIM60P10Y-201ENST00000425589 751 ntBASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 MTCO3P5-201ENST00000433620 714 ntBASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 HMGB1P31-201ENST00000437242 427 ntBASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 AC092473.1-201ENST00000441098 221 ntBASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 AC245517.4-201ENST00000448601 281 ntBASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 AC012308.1-201ENST00000451232 178 ntBASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 AC009474.2-201ENST00000451383 136 ntBASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 RNU7-95P-201ENST00000459222 64 ntBASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 AL121594.1-201ENST00000475906 575 ntBASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 HMGB1P30-201ENST00000492455 606 ntBASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 AC134050.1-201ENST00000495088 933 ntBASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 TRAV32-201ENST00000553993 340 ntBASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 AC012065.4-201ENST00000602445 679 ntBASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 AC018645.2-201ENST00000609151 472 ntBASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.2□□□□□ -2.22
CDCA4Q9BXL8 AC233981.2-201ENST00000611524 1614 ntBASIC1.19□□□□□ -2.22
CDCA4Q9BXL8 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CDCA4Q9BXL8 Y_RNA.40-201ENST00000362645 93 ntBASIC1.19□□□□□ -2.22
CDCA4Q9BXL8 RNU6-942P-201ENST00000363002 107 ntBASIC1.19□□□□□ -2.22
CDCA4Q9BXL8 RNU6-944P-201ENST00000364023 107 ntBASIC1.19□□□□□ -2.22
CDCA4Q9BXL8 MIR29B2-201ENST00000385055 81 ntBASIC1.19□□□□□ -2.22
CDCA4Q9BXL8 BTF3L4P2-201ENST00000392798 346 ntBASIC1.19□□□□□ -2.22
CDCA4Q9BXL8 RPL30P13-201ENST00000418873 348 ntBASIC1.19□□□□□ -2.22
CDCA4Q9BXL8 AL365338.1-201ENST00000422282 858 ntBASIC1.19□□□□□ -2.22
CDCA4Q9BXL8 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.19□□□□□ -2.22
CDCA4Q9BXL8 SDAD1P3-201ENST00000427380 333 ntBASIC1.19□□□□□ -2.22
CDCA4Q9BXL8 MTCO1P44-201ENST00000441935 243 ntBASIC1.19□□□□□ -2.22
CDCA4Q9BXL8 EXOSC3P1-201ENST00000448649 500 ntBASIC1.19□□□□□ -2.22
CDCA4Q9BXL8 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC1.19□□□□□ -2.22
CDCA4Q9BXL8 AL590365.1-201ENST00000450788 243 ntBASIC1.19□□□□□ -2.22
CDCA4Q9BXL8 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
CDCA4Q9BXL8 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms