Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 AC025033.1-201ENST00000463883 194 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 MED28P2-201ENST00000475771 317 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 MTAPP1-201ENST00000489154 819 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 AC023141.11-201ENST00000508864 202 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 MTND3P5-201ENST00000512798 333 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 SCARNA16.3-201ENST00000516595 184 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 SNORA43.2-201ENST00000516652 128 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 SNORA25.17-201ENST00000517184 124 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 AP004607.1-201ENST00000524456 203 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 UBE2Q2P8-201ENST00000560644 102 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 MIR5571-201ENST00000577998 113 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 MIR5583-1-201ENST00000580941 59 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 AC103987.3-201ENST00000582071 292 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 MIR3199-1-201ENST00000582434 88 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 MIR4765-201ENST00000585007 77 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 AC002984.1-201ENST00000591692 448 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 AC091805.2-201ENST00000603848 235 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 AC093788.1-201ENST00000609356 927 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 AC068792.1-201ENST00000621354 417 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 Z69720.2-201ENST00000624755 279 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.77□□□□□ -2.13
HDHD3Q9BSH5 HAUS6P2-201ENST00000433254 2404 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 SNX10-209ENST00000619420 2361 ntAPPRIS ALT1 TSL 5 BASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 RBBP8P1-201ENST00000449447 1844 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 Y_RNA.1-201ENST00000352915 104 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 Y_RNA.41-201ENST00000362646 102 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 RNU4-75P-201ENST00000364621 146 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 Y_RNA.399-201ENST00000383955 105 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 RNU6-259P-201ENST00000383999 107 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 MIR218-1-201ENST00000384999 110 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 MIR524-201ENST00000385242 87 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 SNORA48.3-201ENST00000391081 134 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 AL133475.1-201ENST00000404414 305 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 AC016907.1-201ENST00000419483 435 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 AC097463.2-201ENST00000421074 142 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 RPS3AP44-201ENST00000425466 790 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 AC002486.1-201ENST00000435098 391 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 FDX1P2-201ENST00000450769 375 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 AL139109.1-201ENST00000455491 297 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 AC006512.1-201ENST00000468816 291 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 RPS3AP17-201ENST00000472594 777 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 HMGB1P30-201ENST00000492455 606 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 AC074344.1-201ENST00000512823 224 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 LRRC34P2-201ENST00000514850 553 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 RNU4ATAC8P-201ENST00000516196 109 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 SNORA40.12-201ENST00000516329 111 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 RNU6-1178P-201ENST00000516674 107 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 RNU1-40P-201ENST00000516816 164 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 RNU1-97P-201ENST00000516872 164 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 SNORA31.18-201ENST00000517043 134 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 RPS3AP23-202ENST00000574601 686 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 AC105245.1-201ENST00000581934 244 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 RPS15AP11-201ENST00000594193 385 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 AL031601.2-202ENST00000622650 282 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 AC022418.1-201ENST00000624118 445 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 SCARNA4-202ENST00000625402 129 ntBASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC1.76□□□□□ -2.13
HDHD3Q9BSH5 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
HDHD3Q9BSH5 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HDHD3Q9BSH5 RNU6-486P-201ENST00000363116 107 ntBASIC1.75□□□□□ -2.13
HDHD3Q9BSH5 RNU1-91P-201ENST00000364746 163 ntBASIC1.75□□□□□ -2.13
HDHD3Q9BSH5 MIR483-201ENST00000385070 76 ntBASIC1.75□□□□□ -2.13
HDHD3Q9BSH5 RNU6-1140P-201ENST00000410517 106 ntBASIC1.75□□□□□ -2.13
HDHD3Q9BSH5 MTCYBP8-201ENST00000422855 651 ntBASIC1.75□□□□□ -2.13
HDHD3Q9BSH5 BX276092.3-201ENST00000424182 230 ntBASIC1.75□□□□□ -2.13
HDHD3Q9BSH5 EIF4EP4-201ENST00000424916 578 ntBASIC1.75□□□□□ -2.13
HDHD3Q9BSH5 SCARNA18-201ENST00000459004 134 ntBASIC1.75□□□□□ -2.13
HDHD3Q9BSH5 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.75□□□□□ -2.13
HDHD3Q9BSH5 AC079382.1-201ENST00000493346 557 ntBASIC1.75□□□□□ -2.13
HDHD3Q9BSH5 CCDC34P1-201ENST00000507441 517 ntBASIC1.75□□□□□ -2.13
HDHD3Q9BSH5 AC114781.4-201ENST00000513707 639 ntBASIC1.75□□□□□ -2.13
HDHD3Q9BSH5 RNA5SP112-201ENST00000515937 99 ntBASIC1.75□□□□□ -2.13
HDHD3Q9BSH5 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.75□□□□□ -2.13
HDHD3Q9BSH5 AC104383.1-201ENST00000530297 370 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms