Protein–RNA interactions for Protein: Q99959

PKP2, Plakophilin-2, humanhuman

Predictions only

Length 881 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2Q99959 AC109329.2-201ENST00000519658 482 ntBASIC2.58□□□□□ -2
PKP2Q99959 AC107953.1-201ENST00000522216 297 ntBASIC2.58□□□□□ -2
PKP2Q99959 MTND4P7-201ENST00000523876 130 ntBASIC2.58□□□□□ -2
PKP2Q99959 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.58□□□□□ -2
PKP2Q99959 AL137161.1-201ENST00000532231 390 ntBASIC2.58□□□□□ -2
PKP2Q99959 MDM2-233ENST00000545204 398 ntTSL 5 BASIC2.58□□□□□ -2
PKP2Q99959 AL121821.2-201ENST00000556081 394 ntBASIC2.58□□□□□ -2
PKP2Q99959 AL118558.2-201ENST00000556294 238 ntBASIC2.58□□□□□ -2
PKP2Q99959 AL117336.2-201ENST00000602435 335 ntBASIC2.58□□□□□ -2
PKP2Q99959 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.58□□□□□ -2
PKP2Q99959 AC093732.2-201ENST00000607950 274 ntBASIC2.58□□□□□ -2
PKP2Q99959 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC2.58□□□□□ -2
PKP2Q99959 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
PKP2Q99959 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.58□□□□□ -2
PKP2Q99959 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.58□□□□□ -2
PKP2Q99959 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PKP2Q99959 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PKP2Q99959 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.58□□□□□ -2
PKP2Q99959 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.57□□□□□ -2
PKP2Q99959 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
PKP2Q99959 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.57□□□□□ -2
PKP2Q99959 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PKP2Q99959 MIR6073-201ENST00000352083 89 ntBASIC2.57□□□□□ -2
PKP2Q99959 U3.12-201ENST00000364498 214 ntBASIC2.57□□□□□ -2
PKP2Q99959 Y_RNA.263-201ENST00000364659 114 ntBASIC2.57□□□□□ -2
PKP2Q99959 RNU6-116P-201ENST00000384042 109 ntBASIC2.57□□□□□ -2
PKP2Q99959 CISD1P1-201ENST00000393907 327 ntBASIC2.57□□□□□ -2
PKP2Q99959 MIR1261-201ENST00000408659 82 ntBASIC2.57□□□□□ -2
PKP2Q99959 RNA5SP181-201ENST00000410246 98 ntBASIC2.57□□□□□ -2
PKP2Q99959 RNU4-26P-201ENST00000410270 107 ntBASIC2.57□□□□□ -2
PKP2Q99959 EEF1A1P40-201ENST00000412883 573 ntBASIC2.57□□□□□ -2
PKP2Q99959 AC009161.1-201ENST00000417306 376 ntBASIC2.57□□□□□ -2
PKP2Q99959 ACTR3BP6-201ENST00000422332 1241 ntBASIC2.57□□□□□ -2
PKP2Q99959 RPL35AP12-201ENST00000425362 338 ntBASIC2.57□□□□□ -2
PKP2Q99959 MTCO3P46-201ENST00000425787 232 ntBASIC2.57□□□□□ -2
PKP2Q99959 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.57□□□□□ -2
PKP2Q99959 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.57□□□□□ -2
PKP2Q99959 NIPA2P5-201ENST00000452282 464 ntBASIC2.57□□□□□ -2
PKP2Q99959 AC090096.1-201ENST00000489168 390 ntBASIC2.57□□□□□ -2
PKP2Q99959 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.57□□□□□ -2
PKP2Q99959 AC023141.11-201ENST00000508864 202 ntBASIC2.57□□□□□ -2
PKP2Q99959 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.57□□□□□ -2
PKP2Q99959 AC112206.3-201ENST00000514578 389 ntBASIC2.57□□□□□ -2
PKP2Q99959 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.57□□□□□ -2
PKP2Q99959 SNORA31.6-201ENST00000516241 130 ntBASIC2.57□□□□□ -2
PKP2Q99959 RNU6-1038P-201ENST00000516516 104 ntBASIC2.57□□□□□ -2
PKP2Q99959 AP002404.1-201ENST00000532005 451 ntBASIC2.57□□□□□ -2
PKP2Q99959 PSMA3P-201ENST00000555485 635 ntBASIC2.57□□□□□ -2
PKP2Q99959 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.57□□□□□ -2
PKP2Q99959 AC023824.2-201ENST00000566185 400 ntBASIC2.57□□□□□ -2
PKP2Q99959 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC2.57□□□□□ -2
PKP2Q99959 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.57□□□□□ -2
PKP2Q99959 AL670379.4-201ENST00000605279 254 ntBASIC2.57□□□□□ -2
PKP2Q99959 AL158032.1-201ENST00000605401 106 ntBASIC2.57□□□□□ -2
PKP2Q99959 AC021646.1-201ENST00000605469 484 ntBASIC2.57□□□□□ -2
PKP2Q99959 AC022893.3-201ENST00000607665 437 ntBASIC2.57□□□□□ -2
PKP2Q99959 AL359547.2-201ENST00000615810 418 ntBASIC2.57□□□□□ -2
PKP2Q99959 AL449363.1-201ENST00000617815 186 ntBASIC2.57□□□□□ -2
PKP2Q99959 AC009248.2-201ENST00000619826 254 ntBASIC2.57□□□□□ -2
PKP2Q99959 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC2.57□□□□□ -2
PKP2Q99959 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC2.57□□□□□ -2
PKP2Q99959 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.57□□□□□ -2
PKP2Q99959 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
PKP2Q99959 MTND5P30-201ENST00000452896 1731 ntBASIC2.56□□□□□ -2
PKP2Q99959 VTRNA1-1-201ENST00000363120 99 ntBASIC2.56□□□□□ -2
PKP2Q99959 Y_RNA.142-201ENST00000363491 102 ntBASIC2.56□□□□□ -2
PKP2Q99959 Y_RNA.166-201ENST00000363730 102 ntBASIC2.56□□□□□ -2
PKP2Q99959 Y_RNA.167-201ENST00000363735 109 ntBASIC2.56□□□□□ -2
PKP2Q99959 Y_RNA.378-201ENST00000365652 113 ntBASIC2.56□□□□□ -2
PKP2Q99959 SNORA32.2-201ENST00000384049 122 ntBASIC2.56□□□□□ -2
PKP2Q99959 RNU6-1127P-201ENST00000384580 107 ntBASIC2.56□□□□□ -2
PKP2Q99959 RNU6-1072P-201ENST00000384703 107 ntBASIC2.56□□□□□ -2
PKP2Q99959 RNU6-19P-201ENST00000384718 107 ntBASIC2.56□□□□□ -2
PKP2Q99959 RNU6-443P-201ENST00000384780 107 ntBASIC2.56□□□□□ -2
PKP2Q99959 MIR301A-201ENST00000385261 86 ntBASIC2.56□□□□□ -2
PKP2Q99959 RNA5SP210-201ENST00000391034 120 ntBASIC2.56□□□□□ -2
PKP2Q99959 AL591212.2-201ENST00000433923 257 ntBASIC2.56□□□□□ -2
PKP2Q99959 BRK1P2-201ENST00000442875 223 ntBASIC2.56□□□□□ -2
PKP2Q99959 RPL7P12-201ENST00000446719 750 ntBASIC2.56□□□□□ -2
PKP2Q99959 AC104058.1-201ENST00000448028 297 ntBASIC2.56□□□□□ -2
PKP2Q99959 RNU7-26P-201ENST00000458980 63 ntBASIC2.56□□□□□ -2
PKP2Q99959 AC007547.1-201ENST00000462177 490 ntBASIC2.56□□□□□ -2
PKP2Q99959 AC133134.1-201ENST00000466800 359 ntBASIC2.56□□□□□ -2
PKP2Q99959 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC2.56□□□□□ -2
PKP2Q99959 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC2.56□□□□□ -2
PKP2Q99959 RPL7P20-201ENST00000520308 745 ntBASIC2.56□□□□□ -2
PKP2Q99959 AC243972.3-201ENST00000539655 198 ntBASIC2.56□□□□□ -2
PKP2Q99959 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC2.56□□□□□ -2
PKP2Q99959 MIR3199-1-201ENST00000582434 88 ntBASIC2.56□□□□□ -2
PKP2Q99959 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC2.56□□□□□ -2
PKP2Q99959 AC060766.3-201ENST00000591442 263 ntBASIC2.56□□□□□ -2
PKP2Q99959 AL138889.2-201ENST00000603883 242 ntBASIC2.56□□□□□ -2
PKP2Q99959 AC091152.3-201ENST00000604227 325 ntBASIC2.56□□□□□ -2
PKP2Q99959 ATP1B3P1-201ENST00000605365 821 ntBASIC2.56□□□□□ -2
PKP2Q99959 AC092807.2-201ENST00000609367 243 ntBASIC2.56□□□□□ -2
PKP2Q99959 AL512643.1-201ENST00000635735 524 ntBASIC2.56□□□□□ -2
PKP2Q99959 MIR7157-201ENST00000635801 60 ntBASIC2.56□□□□□ -2
PKP2Q99959 Z99571.1-201ENST00000636677 394 ntBASIC2.56□□□□□ -2
PKP2Q99959 AC073544.1-201ENST00000600110 1595 ntBASIC2.56□□□□□ -2
PKP2Q99959 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms