Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 AL353997.1-201ENST00000432936 108 ntBASIC3.16□□□□□ -1.9
SNX18Q96RF0 SNRPEP4-201ENST00000435815 279 ntBASIC3.16□□□□□ -1.9
SNX18Q96RF0 MTND3P2-201ENST00000438452 342 ntBASIC3.16□□□□□ -1.9
SNX18Q96RF0 SNORD105B-201ENST00000458770 79 ntBASIC3.16□□□□□ -1.9
SNX18Q96RF0 U3.44-201ENST00000458938 192 ntBASIC3.16□□□□□ -1.9
SNX18Q96RF0 FO393415.2-201ENST00000480085 343 ntBASIC3.16□□□□□ -1.9
SNX18Q96RF0 AC068781.1-201ENST00000488231 618 ntBASIC3.16□□□□□ -1.9
SNX18Q96RF0 MTND4LP22-201ENST00000508209 276 ntBASIC3.16□□□□□ -1.9
SNX18Q96RF0 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.16□□□□□ -1.9
SNX18Q96RF0 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.16□□□□□ -1.9
SNX18Q96RF0 SNORA25.10-201ENST00000515926 124 ntBASIC3.16□□□□□ -1.9
SNX18Q96RF0 Y_RNA.720-201ENST00000517166 92 ntBASIC3.16□□□□□ -1.9
SNX18Q96RF0 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
SNX18Q96RF0 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.16□□□□□ -1.9
SNX18Q96RF0 CYCSP39-201ENST00000565821 309 ntBASIC3.16□□□□□ -1.9
SNX18Q96RF0 AC010653.1-201ENST00000571108 881 ntBASIC3.16□□□□□ -1.9
SNX18Q96RF0 CPDP1-201ENST00000579660 283 ntBASIC3.16□□□□□ -1.9
SNX18Q96RF0 MIR4680-201ENST00000580906 66 ntBASIC3.16□□□□□ -1.9
SNX18Q96RF0 MIR3609-201ENST00000582661 80 ntBASIC3.16□□□□□ -1.9
SNX18Q96RF0 MIR4273-201ENST00000582824 84 ntBASIC3.16□□□□□ -1.9
SNX18Q96RF0 AP000942.4-201ENST00000604811 241 ntBASIC3.16□□□□□ -1.9
SNX18Q96RF0 AC008962.1-201ENST00000605729 304 ntBASIC3.16□□□□□ -1.9
SNX18Q96RF0 MIR6076-201ENST00000617521 113 ntBASIC3.16□□□□□ -1.9
SNX18Q96RF0 AC008121.3-201ENST00000618726 433 ntBASIC3.16□□□□□ -1.9
SNX18Q96RF0 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
SNX18Q96RF0 AC073308.1-201ENST00000623696 305 ntBASIC3.16□□□□□ -1.9
SNX18Q96RF0 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.16□□□□□ -1.9
SNX18Q96RF0 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SNX18Q96RF0 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SNX18Q96RF0 AC002546.1-201ENST00000588041 2504 ntBASIC3.16□□□□□ -1.9
SNX18Q96RF0 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
SNX18Q96RF0 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SNX18Q96RF0 MTND5P7-201ENST00000413558 1798 ntBASIC3.15□□□□□ -1.9
SNX18Q96RF0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
SNX18Q96RF0 RNU6-428P-201ENST00000362942 107 ntBASIC3.15□□□□□ -1.91
SNX18Q96RF0 Y_RNA.158-201ENST00000363651 101 ntBASIC3.15□□□□□ -1.91
SNX18Q96RF0 RNU6-270P-201ENST00000364131 105 ntBASIC3.15□□□□□ -1.91
SNX18Q96RF0 MIR521-1-201ENST00000384902 87 ntBASIC3.15□□□□□ -1.91
SNX18Q96RF0 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SNX18Q96RF0 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
SNX18Q96RF0 RN7SKP111-201ENST00000410349 271 ntBASIC3.15□□□□□ -1.91
SNX18Q96RF0 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.15□□□□□ -1.91
SNX18Q96RF0 AC099548.1-201ENST00000421443 426 ntBASIC3.15□□□□□ -1.91
SNX18Q96RF0 MRPS18CP6-201ENST00000423587 223 ntBASIC3.15□□□□□ -1.91
SNX18Q96RF0 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.15□□□□□ -1.91
SNX18Q96RF0 AC244505.4-201ENST00000434905 287 ntBASIC3.15□□□□□ -1.91
SNX18Q96RF0 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.15□□□□□ -1.91
SNX18Q96RF0 AC011816.1-201ENST00000441346 546 ntBASIC3.15□□□□□ -1.91
SNX18Q96RF0 SSXP5-201ENST00000443473 287 ntBASIC3.15□□□□□ -1.91
SNX18Q96RF0 AL590664.1-201ENST00000448065 339 ntBASIC3.15□□□□□ -1.91
SNX18Q96RF0 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SNX18Q96RF0 MTND5P22-201ENST00000458380 195 ntBASIC3.15□□□□□ -1.91
SNX18Q96RF0 RPL30P14-201ENST00000482744 348 ntBASIC3.15□□□□□ -1.91
SNX18Q96RF0 AC021146.2-201ENST00000504736 556 ntBASIC3.15□□□□□ -1.91
SNX18Q96RF0 AK3P2-201ENST00000507976 429 ntBASIC3.15□□□□□ -1.91
SNX18Q96RF0 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.15□□□□□ -1.91
SNX18Q96RF0 SNORD116.3-201ENST00000517176 78 ntBASIC3.15□□□□□ -1.91
SNX18Q96RF0 CBX3P8-201ENST00000532412 525 ntBASIC3.15□□□□□ -1.91
SNX18Q96RF0 HIGD1AP1-201ENST00000550979 275 ntBASIC3.15□□□□□ -1.91
SNX18Q96RF0 LINC00933-203ENST00000559812 219 ntBASIC3.15□□□□□ -1.91
SNX18Q96RF0 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.15□□□□□ -1.91
SNX18Q96RF0 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.15□□□□□ -1.91
SNX18Q96RF0 HSPE1P7-201ENST00000604681 321 ntBASIC3.15□□□□□ -1.91
SNX18Q96RF0 AC005014.2-201ENST00000607795 599 ntBASIC3.15□□□□□ -1.91
SNX18Q96RF0 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SNX18Q96RF0 MTND5P16-201ENST00000460269 1703 ntBASIC3.15□□□□□ -1.91
SNX18Q96RF0 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
SNX18Q96RF0 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.14□□□□□ -1.91
SNX18Q96RF0 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SNX18Q96RF0 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SNX18Q96RF0 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SNX18Q96RF0 SNORA51.4-201ENST00000364993 124 ntBASIC3.14□□□□□ -1.91
SNX18Q96RF0 RNU6-596P-201ENST00000365395 98 ntBASIC3.14□□□□□ -1.91
SNX18Q96RF0 Z98749.2-208ENST00000381646 500 ntBASIC3.14□□□□□ -1.91
SNX18Q96RF0 RNU6-72P-201ENST00000384285 79 ntBASIC3.14□□□□□ -1.91
SNX18Q96RF0 RPL21P3-201ENST00000395517 478 ntBASIC3.14□□□□□ -1.91
SNX18Q96RF0 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.14□□□□□ -1.91
SNX18Q96RF0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC3.14□□□□□ -1.91
SNX18Q96RF0 AL353705.1-201ENST00000433468 480 ntBASIC3.14□□□□□ -1.91
SNX18Q96RF0 AC146507.2-201ENST00000460608 476 ntBASIC3.14□□□□□ -1.91
SNX18Q96RF0 RPL23AP67-201ENST00000465341 474 ntBASIC3.14□□□□□ -1.91
SNX18Q96RF0 AC022447.4-201ENST00000504053 364 ntBASIC3.14□□□□□ -1.91
SNX18Q96RF0 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.14□□□□□ -1.91
SNX18Q96RF0 MIR2276-201ENST00000516886 89 ntBASIC3.14□□□□□ -1.91
SNX18Q96RF0 AC109479.2-201ENST00000517842 174 ntBASIC3.14□□□□□ -1.91
SNX18Q96RF0 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC3.14□□□□□ -1.91
SNX18Q96RF0 AC012468.1-201ENST00000604888 430 ntBASIC3.14□□□□□ -1.91
SNX18Q96RF0 MTND4LP5-201ENST00000605152 292 ntBASIC3.14□□□□□ -1.91
SNX18Q96RF0 AC018889.1-201ENST00000605372 397 ntBASIC3.14□□□□□ -1.91
SNX18Q96RF0 AC004852.3-201ENST00000614131 326 ntBASIC3.14□□□□□ -1.91
SNX18Q96RF0 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.14□□□□□ -1.91
SNX18Q96RF0 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
SNX18Q96RF0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.13□□□□□ -1.91
SNX18Q96RF0 AC017071.1-201ENST00000564407 2204 ntBASIC3.13□□□□□ -1.91
SNX18Q96RF0 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.13□□□□□ -1.91
SNX18Q96RF0 RNU6-1309P-201ENST00000363305 108 ntBASIC3.13□□□□□ -1.91
SNX18Q96RF0 RNA5SP51-201ENST00000364750 119 ntBASIC3.13□□□□□ -1.91
SNX18Q96RF0 RNU5E-7P-201ENST00000365290 117 ntBASIC3.13□□□□□ -1.91
SNX18Q96RF0 U8.8-201ENST00000365399 135 ntBASIC3.13□□□□□ -1.91
SNX18Q96RF0 RNU6-898P-201ENST00000365627 104 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms