Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.76□□□□□ -1.97
NEK1Q96PY6 RNU6-1280P-201ENST00000365211 107 ntBASIC2.76□□□□□ -1.97
NEK1Q96PY6 RNU6-45P-201ENST00000384471 107 ntBASIC2.76□□□□□ -1.97
NEK1Q96PY6 MIR10A-201ENST00000385043 110 ntBASIC2.76□□□□□ -1.97
NEK1Q96PY6 SCARNA18-201ENST00000459004 134 ntBASIC2.76□□□□□ -1.97
NEK1Q96PY6 snoU109.2-201ENST00000459316 135 ntBASIC2.76□□□□□ -1.97
NEK1Q96PY6 AC090096.1-201ENST00000489168 390 ntBASIC2.76□□□□□ -1.97
NEK1Q96PY6 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC2.76□□□□□ -1.97
NEK1Q96PY6 AC019235.1-201ENST00000503847 207 ntBASIC2.76□□□□□ -1.97
NEK1Q96PY6 MTCO3P9-201ENST00000506989 781 ntBASIC2.76□□□□□ -1.97
NEK1Q96PY6 HMGB3P3-201ENST00000510526 400 ntBASIC2.76□□□□□ -1.97
NEK1Q96PY6 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.76□□□□□ -1.97
NEK1Q96PY6 AC104136.1-201ENST00000512969 394 ntBASIC2.76□□□□□ -1.97
NEK1Q96PY6 SNORA40.12-201ENST00000516329 111 ntBASIC2.76□□□□□ -1.97
NEK1Q96PY6 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.76□□□□□ -1.97
NEK1Q96PY6 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.76□□□□□ -1.97
NEK1Q96PY6 IGKV3-31-201ENST00000523109 329 ntBASIC2.76□□□□□ -1.97
NEK1Q96PY6 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.76□□□□□ -1.97
NEK1Q96PY6 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.76□□□□□ -1.97
NEK1Q96PY6 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2.76□□□□□ -1.97
NEK1Q96PY6 AC092325.1-201ENST00000566449 554 ntBASIC2.76□□□□□ -1.97
NEK1Q96PY6 AC025678.1-201ENST00000567861 338 ntBASIC2.76□□□□□ -1.97
NEK1Q96PY6 AC073539.2-201ENST00000597113 165 ntBASIC2.76□□□□□ -1.97
NEK1Q96PY6 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.76□□□□□ -1.97
NEK1Q96PY6 AC093788.1-201ENST00000609356 927 ntBASIC2.76□□□□□ -1.97
NEK1Q96PY6 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.76□□□□□ -1.97
NEK1Q96PY6 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.76□□□□□ -1.97
NEK1Q96PY6 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
NEK1Q96PY6 AC010329.5-201ENST00000623497 2174 ntBASIC2.76□□□□□ -1.97
NEK1Q96PY6 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
NEK1Q96PY6 RNA5SP289-201ENST00000362332 137 ntBASIC2.75□□□□□ -1.97
NEK1Q96PY6 SNORA69-201ENST00000383895 132 ntBASIC2.75□□□□□ -1.97
NEK1Q96PY6 RNU6-1083P-201ENST00000384022 107 ntBASIC2.75□□□□□ -1.97
NEK1Q96PY6 SNORD70.1-201ENST00000391007 85 ntBASIC2.75□□□□□ -1.97
NEK1Q96PY6 RNU6-482P-201ENST00000391068 107 ntBASIC2.75□□□□□ -1.97
NEK1Q96PY6 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.75□□□□□ -1.97
NEK1Q96PY6 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.75□□□□□ -1.97
NEK1Q96PY6 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC2.75□□□□□ -1.97
NEK1Q96PY6 PGBD4P6-201ENST00000421501 610 ntBASIC2.75□□□□□ -1.97
NEK1Q96PY6 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.75□□□□□ -1.97
NEK1Q96PY6 AL627311.1-201ENST00000431514 115 ntBASIC2.75□□□□□ -1.97
NEK1Q96PY6 RPS15AP28-201ENST00000435088 386 ntBASIC2.75□□□□□ -1.97
NEK1Q96PY6 AL161651.1-201ENST00000440882 223 ntBASIC2.75□□□□□ -1.97
NEK1Q96PY6 IFNA11P-201ENST00000446352 526 ntBASIC2.75□□□□□ -1.97
NEK1Q96PY6 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
NEK1Q96PY6 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC2.75□□□□□ -1.97
NEK1Q96PY6 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.75□□□□□ -1.97
NEK1Q96PY6 AC083798.1-201ENST00000472671 131 ntBASIC2.75□□□□□ -1.97
NEK1Q96PY6 HMGB1P30-201ENST00000492455 606 ntBASIC2.75□□□□□ -1.97
NEK1Q96PY6 AC108210.2-201ENST00000503681 201 ntBASIC2.75□□□□□ -1.97
NEK1Q96PY6 RNU5F-8P-201ENST00000515941 111 ntBASIC2.75□□□□□ -1.97
NEK1Q96PY6 Y_RNA.693-201ENST00000516641 110 ntBASIC2.75□□□□□ -1.97
NEK1Q96PY6 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.75□□□□□ -1.97
NEK1Q96PY6 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.75□□□□□ -1.97
NEK1Q96PY6 AC015712.3-201ENST00000559380 164 ntBASIC2.75□□□□□ -1.97
NEK1Q96PY6 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.75□□□□□ -1.97
NEK1Q96PY6 MIR5007-201ENST00000583098 95 ntBASIC2.75□□□□□ -1.97
NEK1Q96PY6 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.75□□□□□ -1.97
NEK1Q96PY6 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.75□□□□□ -1.97
NEK1Q96PY6 AL354685.2-201ENST00000448218 1447 ntBASIC2.75□□□□□ -1.97
NEK1Q96PY6 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.74□□□□□ -1.97
NEK1Q96PY6 RNU6-483P-201ENST00000384088 108 ntBASIC2.74□□□□□ -1.97
NEK1Q96PY6 RNU6-393P-201ENST00000384475 107 ntBASIC2.74□□□□□ -1.97
NEK1Q96PY6 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
NEK1Q96PY6 AL606923.1-201ENST00000406616 190 ntBASIC2.74□□□□□ -1.97
NEK1Q96PY6 AC016831.2-201ENST00000417179 352 ntBASIC2.74□□□□□ -1.97
NEK1Q96PY6 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
NEK1Q96PY6 C8orf59P1-201ENST00000429930 303 ntBASIC2.74□□□□□ -1.97
NEK1Q96PY6 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.74□□□□□ -1.97
NEK1Q96PY6 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC2.74□□□□□ -1.97
NEK1Q96PY6 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC2.74□□□□□ -1.97
NEK1Q96PY6 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC2.74□□□□□ -1.97
NEK1Q96PY6 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.74□□□□□ -1.97
NEK1Q96PY6 AC073901.1-201ENST00000462471 408 ntBASIC2.74□□□□□ -1.97
NEK1Q96PY6 RNA5SP401-201ENST00000515920 127 ntBASIC2.74□□□□□ -1.97
NEK1Q96PY6 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.74□□□□□ -1.97
NEK1Q96PY6 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC2.74□□□□□ -1.97
NEK1Q96PY6 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.74□□□□□ -1.97
NEK1Q96PY6 AC078814.3-201ENST00000553036 491 ntBASIC2.74□□□□□ -1.97
NEK1Q96PY6 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.74□□□□□ -1.97
NEK1Q96PY6 HMGB1P33-201ENST00000563485 527 ntBASIC2.74□□□□□ -1.97
NEK1Q96PY6 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.74□□□□□ -1.97
NEK1Q96PY6 AC105137.2-201ENST00000569073 466 ntBASIC2.74□□□□□ -1.97
NEK1Q96PY6 MIR5583-1-201ENST00000580941 59 ntBASIC2.74□□□□□ -1.97
NEK1Q96PY6 BNIP3P30-201ENST00000601184 574 ntBASIC2.74□□□□□ -1.97
NEK1Q96PY6 AC025165.5-201ENST00000602802 578 ntBASIC2.74□□□□□ -1.97
NEK1Q96PY6 AC004492.1-201ENST00000607036 742 ntBASIC2.74□□□□□ -1.97
NEK1Q96PY6 MIR6134-201ENST00000617606 109 ntBASIC2.74□□□□□ -1.97
NEK1Q96PY6 MIR7515-201ENST00000637837 67 ntBASIC2.74□□□□□ -1.97
NEK1Q96PY6 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
NEK1Q96PY6 AL139276.1-201ENST00000311910 1001 ntBASIC2.73□□□□□ -1.97
NEK1Q96PY6 SNORD14B-201ENST00000364533 90 ntBASIC2.73□□□□□ -1.97
NEK1Q96PY6 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
NEK1Q96PY6 RNU6-1127P-201ENST00000384580 107 ntBASIC2.73□□□□□ -1.97
NEK1Q96PY6 Y_RNA.554-201ENST00000384672 102 ntBASIC2.73□□□□□ -1.97
NEK1Q96PY6 AL353621.1-201ENST00000418219 243 ntBASIC2.73□□□□□ -1.97
NEK1Q96PY6 AL669831.1-202ENST00000428504 417 ntBASIC2.73□□□□□ -1.97
NEK1Q96PY6 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.73□□□□□ -1.97
NEK1Q96PY6 MTND3P21-201ENST00000433774 331 ntBASIC2.73□□□□□ -1.97
NEK1Q96PY6 AC018634.1-201ENST00000437554 401 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms